CB290363

Overview
NameCB290363
Unique NameCB290363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABF_STAAW (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.730e-52
Identity = 112/247 (45.34%), Postives = 157/247 (63.56%), Query Frame = 2
Query:   14 RYCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            +Y IVA ++A++DA L  DI++    +R              F    + L++KG R+++PFF+P  I +M +  ++IDLG  GPN +  TACAT       A   ++RG+AD M+ GGTEA I  + + GF A RALS  NDD +TA RP+ + RDGFVMGEGAG+LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AI
Sbjct:   77 QYAIVAAREAVKDAQL--DINENT-ADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAI 319          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABF_STAAU (3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment) OS=Staphylococcus aureus GN=fabF PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.730e-52
Identity = 112/247 (45.34%), Postives = 157/247 (63.56%), Query Frame = 2
Query:   14 RYCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            +Y IVA ++A++DA L  DI++    +R              F    + L++KG R+++PFF+P  I +M +  ++IDLG  GPN +  TACAT       A   ++RG+AD M+ GGTEA I  + + GF A RALS  NDD +TA RP+ + RDGFVMGEGAG+LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AI
Sbjct:   70 QYAIVAAREAVKDAQL--DINENT-ADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAI 312          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABF_STAAS (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MSSA476) GN=fabF PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.730e-52
Identity = 112/247 (45.34%), Postives = 157/247 (63.56%), Query Frame = 2
Query:   14 RYCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            +Y IVA ++A++DA L  DI++    +R              F    + L++KG R+++PFF+P  I +M +  ++IDLG  GPN +  TACAT       A   ++RG+AD M+ GGTEA I  + + GF A RALS  NDD +TA RP+ + RDGFVMGEGAG+LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AI
Sbjct:   77 QYAIVAAREAVKDAQL--DINENT-ADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAI 319          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABF_STAAR (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MRSA252) GN=fabF PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.730e-52
Identity = 112/247 (45.34%), Postives = 157/247 (63.56%), Query Frame = 2
Query:   14 RYCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            +Y IVA ++A++DA L  DI++    +R              F    + L++KG R+++PFF+P  I +M +  ++IDLG  GPN +  TACAT       A   ++RG+AD M+ GGTEA I  + + GF A RALS  NDD +TA RP+ + RDGFVMGEGAG+LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AI
Sbjct:   77 QYAIVAAREAVKDAQL--DINENT-ADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAI 319          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABF_STAAC (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain COL) GN=fabF PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.730e-52
Identity = 112/247 (45.34%), Postives = 157/247 (63.56%), Query Frame = 2
Query:   14 RYCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            +Y IVA ++A++DA L  DI++    +R              F    + L++KG R+++PFF+P  I +M +  ++IDLG  GPN +  TACAT       A   ++RG+AD M+ GGTEA I  + + GF A RALS  NDD +TA RP+ + RDGFVMGEGAG+LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AI
Sbjct:   77 QYAIVAAREAVKDAQL--DINENT-ADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAI 319          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABF_STAAN (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain N315) GN=fabF PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.951e-52
Identity = 112/247 (45.34%), Postives = 156/247 (63.16%), Query Frame = 2
Query:   14 RYCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            +Y IVA ++A++DA L  DI+     +R              F    + L++KG R+++PFF+P  I +M +  ++IDLG  GPN +  TACAT       A   ++RG+AD M+ GGTEA I  + + GF A RALS  NDD +TA RP+ + RDGFVMGEGAG+LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AI
Sbjct:   77 QYAIVAAREAVKDAQL--DINDNT-ADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAI 319          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABF_STAAM (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabF PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.951e-52
Identity = 112/247 (45.34%), Postives = 156/247 (63.16%), Query Frame = 2
Query:   14 RYCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            +Y IVA ++A++DA L  DI+     +R              F    + L++KG R+++PFF+P  I +M +  ++IDLG  GPN +  TACAT       A   ++RG+AD M+ GGTEA I  + + GF A RALS  NDD +TA RP+ + RDGFVMGEGAG+LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AI
Sbjct:   77 QYAIVAAREAVKDAQL--DINDNT-ADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAI 319          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABF_BACSU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis GN=fabF PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.492e-51
Identity = 110/247 (44.53%), Postives = 152/247 (61.54%), Query Frame = 2
Query:   14 RYCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            +Y +VA K A+EDADL  +I+ +I   R                   +  + KG R+++PFF+P  I +M +  ++I LG  G N    TACAT       A   I+RG+AD+M+ GGTEA +  +   GF A +ALS  N DP+TASRP+DK+RDGFVMGEGAG++V+E LEHA+ RGA I  E +G     DAYH+T P  DG G +  ++ +++DAG++PEE++YINAH TST   D  E  AI
Sbjct:   76 QYAVVAAKMAVEDADL--NITDEI-APRVGVWVGSGIGGLETLESQFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKVIQRGDADVMVTGGTEAPLTRMSFAGFSANKALST-NPDPKTASRPFDKNRDGFVMGEGAGIIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDAGIAPEEIDYINAHGTSTYYNDKYETMAI 318          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABF_RHIME (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti GN=fabF PE=3 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.115e-50
Identity = 101/204 (49.51%), Postives = 141/204 (69.12%), Query Frame = 2
Query:  146 DGVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALS-QRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            D    L +KG R+I+PFFIP  + N+ +  ++I     GPN+S+ TAC+T  +    A+  I  G+AD+M+AGGTE+ I  I L GF AC+ALS Q ND+P+ ASRP+D DRDGFVMGEGAG++V+E LEHA  RGA I AE +G  ++ DA+H+T P  DG G   C++ +L+ AGV+  +++YINAH TST+A D  E+ A+
Sbjct:  123 DAGYTLRDKGPRRISPFFIPGRLINLAAGQVSIRHKLRGPNHSVVTACSTGAHAIGDASRLIALGDADVMVAGGTESPICRISLAGFAACKALSTQHNDNPEKASRPYDADRDGFVMGEGAGIVVLEELEHARARGAKIYAEVIGYGLSGDAFHITAPSEDGEGAYRCMQMALKRAGVTAADIDYINAHGTSTMA-DTIELGAV 325          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: KASM_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.053e-49
Identity = 104/247 (42.11%), Postives = 150/247 (60.73%), Query Frame = 2
Query:   17 YCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQR-NDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            Y + A  +AL DA+     +++ +KER                +  Q + EK  R+++PFFIP  + NM S  +++  GF GPN++  TACAT  +    A   I+ G+AD+M+AGGTE++I  + + GF   RALS + N  PQ ASRP+D DRDGFV+GEG+GV+V+E  EHA +RGA I AE  G  ++ DA+H+T P  DG G    +  +L  +G+ P +++Y+NAHATST  GD  E  AI
Sbjct:  121 YAVCAADEALRDAEWLP--TEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAI 365          
The following BLAST results are available for this feature:
BLAST of CB290363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
FABF_STAAW1.730e-5245.343-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAU1.730e-5245.343-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragm... [more]
FABF_STAAS1.730e-5245.343-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAR1.730e-5245.343-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAC1.730e-5245.343-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAN2.951e-5245.343-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAM2.951e-5245.343-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_BACSU9.492e-5144.533-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bac... [more]
FABF_RHIME2.115e-5049.513-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhi... [more]
KASM_ARATH3.053e-4942.113-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ba05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ba05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290363 ID=CB290363; Name=CB290363; organism=Citrus sinensis; type=EST; length=756bp
GCCCTTGGGTTTGAGGTACTGCATTGTTGCTGGCAAGAAGGCTCTCGAAG
ATGCGGATCTTGGTGCCGATATTTCTAAGAAGATTGATAAGGAACGGGCT
GGGGTTCTTGTGGGAACAGGAATGGGTGGTCTTACAGTCTTTTCTGATGG
AGTCCAGGCTCTAATAGAAAAAGGTCATAGAAAAATAACCCCGTTCTTCA
TTCCGTATGCTATAACAAACATGGGTTCTGCTTTGCTTGCAATTGACCTT
GGCTTCATGGGTCCAAATTATTCAATTTCAACTGCCTGTGCGACCTCCAA
TTATTGCTTTTATGCTGCCGCCAATCACATCCGTCGAGGAGAGGCTGATT
TGATGCTTGCTGGTGGAACTGAAGCAGCCATTATTCCTATTGGATTGGGT
GGTTTTGTTGCATGTAGAGCATTGTCTCAGAGAAATGATGACCCACAAAC
TGCTTCTAGGCCATGGGACAAAGATCGGGATGGCTTTGTCATGGGAGAAG
GTGCTGGAGTATTGGTGATGGAGAGCTTGGAACATGCAATGAAACGAGGT
GCACCGATCATAGCAGAGTACTTAGGGGGTGCTGTTAATTGTGATGCTTA
TCATATGACTGACCCCAGAGCTGATGGACTTGGAGTGTCTTCATGCATTG
AGAGCAGCCTTGAAGATGCTGGTGTGTCACCTGAGGAGGTCAACTACATA
AATGCTCACGCAACTTCCACTTTAGCTGGTGACCTGGCTGAGATAAATGC
TATTAA
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