CB290363

Overview
NameCB290363
Unique NameCB290363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: NODE_RHILT (Nodulation protein E OS=Rhizobium leguminosarum bv. trifolii GN=nodE PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.206e-29
Identity = 81/244 (33.20%), Postives = 131/244 (53.69%), Query Frame = 2
Query:   23 IVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            ++A  +A++ A L  D   + +  R                +  ++++  G  +   F  P  + +  +  ++I LG  GP + +++ACA  N+   +A + IR G AD+MLAGG++A +    L  + A R L+     P T  RP+  DR G V+GEGAG+ V+ES EHA  RGA ++AE  G  ++ DAY +  P  +  G  + + S L DA ++P++V+Y+NAH T T+A D  E  AI
Sbjct:   77 VIAATEAMKQAGLSCD---EQNAHRFGAAMGLGGPGWDTIEETYRSILLDGVTRARIFTAPKGMPSAAAGHVSIFLGLRGPVFGVTSACAAGNHAIASAVDQIRLGRADVMLAGGSDAPLTWGVLKSWEALRVLA-----PDTC-RPFSADRKGVVLGEGAGMAVLESYEHAAARGATMLAEVAGIGLSGDAYDIVMPSIE--GPEAAMRSCLADAELNPDDVDYLNAHGTGTVANDEMETAAI 309          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: KAS1_STRGA (Tetracenomycin C polyketide putative beta-ketoacyl synthase 1 OS=Streptomyces glaucescens GN=tcmK PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.819e-29
Identity = 72/186 (38.71%), Postives = 106/186 (56.99%), Query Frame = 2
Query:  194 FFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINA 751
            +F+P +I       +A + G  GP   +ST C +           IR G AD+++ G T+A I PI +  F A +A S  NDDP  ASRP+D++RDGFV+GEG+ V V+E L  A +RGA   AE  G A   +A+HMT  + DG  ++  I ++L+ A  + ++++YINAH + T   D  E  A
Sbjct:  146 YFVPTSICRE----VAWEAGAEGPVTVVSTGCTSGLDAVGYGTELIRDGRADVVVCGATDAPISPITVACFDAIKATSANNDDPAHASRPFDRNRDGFVLGEGSAVFVLEELSAARRRGAHAYAEVRGFATRSNAFHMTGLKPDGREMAEAITAALDQARRTGDDLHYINAHGSGTRQNDRHETAA 327          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABB_ECOLI (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli (strain K12) GN=fabB PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.068e-28
Identity = 78/196 (39.80%), Postives = 111/196 (56.63%), Query Frame = 2
Query:  170 KGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQR-NDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            +G + + P+ +  A+ +  SA LA      G NYSIS+ACATS +C   A   I+ G+ D++ AGG E     +    F A  ALS + ND P+ ASR +D  RDGFV+  G G++V+E LEHA+ RGA I AE +G     D   M  P   G G   C++ ++   GV    ++Y+N+H TST  GD+ E+ AI
Sbjct:  124 RGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMH--GVD-TPIDYLNSHGTSTPVGDVKELAAI 313          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABB_ECOL6 (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli O6 GN=fabB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.068e-28
Identity = 78/196 (39.80%), Postives = 111/196 (56.63%), Query Frame = 2
Query:  170 KGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQR-NDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            +G + + P+ +  A+ +  SA LA      G NYSIS+ACATS +C   A   I+ G+ D++ AGG E     +    F A  ALS + ND P+ ASR +D  RDGFV+  G G++V+E LEHA+ RGA I AE +G     D   M  P   G G   C++ ++   GV    ++Y+N+H TST  GD+ E+ AI
Sbjct:  124 RGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMH--GVD-TPIDYLNSHGTSTPVGDVKELAAI 313          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FAB2_MYCLE (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Mycobacterium leprae GN=kasB PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 5.068e-28
Identity = 66/196 (33.67%), Postives = 108/196 (55.10%), Query Frame = 2
Query:  170 KGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACR-ALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            +G + ++P  +   + N  +A + ++        +  +ACA+ +     A   I  GEAD  + GG E  I  + + GF   R  +S +ND+P  A RP+D+DRDGFV GE   ++++E+ + A  R A I+A  +G ++  D +HM  P  +G      I  ++  AG+SP +++++NAHAT T  GDLAE  AI
Sbjct:  134 RGMKAVSPLAVQKYMPNGAAAAVGLEHHAKAGVMTPVSACASGSEAIAHAWQQIVLGEADSAICGGVETKIEAVPIAGFSQMRIVMSTKNDNPAGACRPFDRDRDGFVFGEAGALMLIETEDSAKARSANILARIMGASITSDGFHMVAPDPNGERAGHAIARAVHLAGLSPSDIDHVNAHATGTQVGDLAEAKAI 329          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABB_HAEIN (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Haemophilus influenzae GN=fabB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28
Identity = 84/247 (34.01%), Postives = 122/247 (49.39%), Query Frame = 2
Query:   17 YCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQR-NDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            Y  ++ ++A+EDA L  D                         D V+    +G + I P+ +   + +  SA LA      G NYS+S+ACATS +C   A   I+ G+ D++ AGG E          F A  A+S + N+ P+ ASR +D +RDGFV+  G  V+V+E LEHA+ RGA I AE +G     D Y M  P   G G   C++ ++         ++YIN H TST  GD+ E+ AI
Sbjct:   74 YAYLSMREAIEDAGLTEDQVSNDRTGLVIGAGTGSAHNQLVACDAVRG--PRGVKAIGPYAVTKTMASSVSACLATPYKIRGVNYSMSSACATSAHCIGHAVELIQLGKQDVVFAGGAEELSWECATE-FDAMGAVSTKYNETPEKASRAYDANRDGFVIAGGGAVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAERCMKQAMATVDT---PIDYINVHGTSTPVGDVKELGAI 312          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: KAS1_STRVN (Granaticin polyketide putative beta-ketoacyl synthase 1 OS=Streptomyces violaceoruber GN=gra-orf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27
Identity = 72/201 (35.82%), Postives = 106/201 (52.74%), Query Frame = 2
Query:  149 GVQALIEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINA 751
            G + L++  H  ++P    Y    +  A +A   G  GP   +S  C +       A    R G AD+++AG  +  + PI +  F A +A + RNDDP  ASRP+D  R+GFV+ EGA + V+E  E A +RGA I AE  G A    AYHMT  + DG  ++  I ++L++A +    V+Y+NAH + T   D  E  A
Sbjct:  125 GREWLVDPAH--LSPMMFDYLSPGVMPAEVAWAAGAEGPVTMVSDGCTSGLDSVGYAVQGTREGSADVVVAGAADTPVSPIVVACFDAIKATTPRNDDPAHASRPFDGTRNGFVLAEGAAMFVLEEYEAAQRRGAHIYAEVGGYATRSQAYHMTGLKKDGREMAESIRAALDEARLDRTAVDYVNAHGSGTKQNDRHETAA 323          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABB_BUCBP (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fabB PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27
Identity = 87/249 (34.94%), Postives = 134/249 (53.82%), Query Frame = 2
Query:   17 YCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGHR--KITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQR-NDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            Y  ++ K+A+EDA L + + +  +  R                +GV ++I+K  R   ++P+ +  ++T+  SA L+      G NYSIS+ACATS +C   A   I+ G+ DL+ AGG E     +    F +  ALS   N  P  +SR +D  RDGFV+  GAG+LV+E L +A+ R A I AE +G   + D Y++  P   G G   C+  ++ +     E ++Y+N H+TST  GDL E+NAI
Sbjct:   75 YSYLSMKQAIEDAKLTSKMYQ--NNPRVGVIIGSSSGSPRCQINGV-SIIKKTKRLKSVSPYTVIKSMTSSISACLSTLFKIQGVNYSISSACATSAHCIGNAMELIQLGKQDLIFAGGGEELSWELACA-FDSMGALSTMYNSQPILSSRVFDYYRDGFVISGGAGILVVEELNYALSRSAHIYAEIVGYGTSSDGYNVVVP--SGNGAMRCMNIAMSNI---QEPIDYLNVHSTSTKIGDLIELNAI 314          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABB_BUCAI (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=fabB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.245e-25
Identity = 86/250 (34.40%), Postives = 126/250 (50.40%), Query Frame = 2
Query:   14 RYCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQALIEKGH--RKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQR-NDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            RY  VA  +A++DA +  +  +K  +                 SD    L++  H  + I+P+     + +  SA L+      G  YSIS+ACATS +C   A   I+ G  DL+ AGG E   + + +  F A RALS   N+DP+ ASR +D  RDGFV+  GAG+LV+E L  A+ R A I AE +G A   D  ++  P  D  G   C+  + +   +    ++Y+N H T T  GDL E+ AI
Sbjct:   73 RYSFVAMMEAIKDAKIDREYYQKNPRVGLISGSGCSFSKNTLTSD--IHLMKNKHISKGISPYLAVKTMPSGISACLSTLFKIYGVTYSISSACATSAHCIGNAFELIQFGRQDLIFAGGGEEISLELAMQ-FDAMRALSTCFNNDPKKASRVYDVYRDGFVISGGAGMLVIEELNSALSRSAYIYAEIIGYAATSDGSNIVVPSGD--GAIRCMNLARKGKNI---PIDYLNVHGTGTKIGDLIELEAI 314          
BLAST of CB290363 vs. ExPASy Swiss-Prot
Match: FABB_BUCAP (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=fabB PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.526e-24
Identity = 83/251 (33.07%), Postives = 125/251 (49.80%), Query Frame = 2
Query:    8 GLRYCIVAGKKALEDADLGADISKKIDKERAXXXXXXXXXXXXXFSDGVQAL-IEKGHRKITPFFIPYAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQR-NDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAI 754
            G  Y  ++ ++A++DA+L     +K    R                 G+ A+   +G   ++P+    A+ +  SA L+      G NYSIS+ACATS +C   A   I+ G+ DL+ AGG E     +    F A +ALS   N +P  +SR +D +RDGFV+  G G++V+E L  A+ R A I AE +G A   D   M  P  D  G   C+  + +   +    ++Y+N H TST  GDL E+ AI
Sbjct:   72 GSIYAFLSMEQAIKDANLQTKQYQK--NPRIGIIAGSGGGFPKYHIQGIDAIRSNRGLNSVSPYIAIKAMNSGISACLSTLFKIYGVNYSISSACATSGHCIGNAFELIKFGKQDLIFAGGGEEVSWELAYE-FDAMKALSSNFNKNPTKSSRVYDVNRDGFVISGGGGIIVIEELNCALSRSAHIYAEIIGYAATSDGKDMVVPSGD--GAVRCMNLAKKQNKML--FIDYLNVHGTSTKIGDLIELEAI 315          
The following BLAST results are available for this feature:
BLAST of CB290363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
NODE_RHILT1.206e-2933.20Nodulation protein E OS=Rhizobium leguminosarum bv... [more]
KAS1_STRGA7.819e-2938.71Tetracenomycin C polyketide putative beta-ketoacyl... [more]
FABB_ECOLI5.068e-2839.803-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Esc... [more]
FABB_ECOL65.068e-2839.803-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Esc... [more]
FAB2_MYCLE5.068e-2833.673-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Myc... [more]
FABB_HAEIN8.645e-2834.013-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Hae... [more]
KAS1_STRVN1.475e-2735.82Granaticin polyketide putative beta-ketoacyl synth... [more]
FABB_BUCBP4.290e-2734.943-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buc... [more]
FABB_BUCAI5.245e-2534.403-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buc... [more]
FABB_BUCAP1.526e-2433.073-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ba05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ba05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290363 ID=CB290363; Name=CB290363; organism=Citrus sinensis; type=EST; length=756bp
GCCCTTGGGTTTGAGGTACTGCATTGTTGCTGGCAAGAAGGCTCTCGAAG
ATGCGGATCTTGGTGCCGATATTTCTAAGAAGATTGATAAGGAACGGGCT
GGGGTTCTTGTGGGAACAGGAATGGGTGGTCTTACAGTCTTTTCTGATGG
AGTCCAGGCTCTAATAGAAAAAGGTCATAGAAAAATAACCCCGTTCTTCA
TTCCGTATGCTATAACAAACATGGGTTCTGCTTTGCTTGCAATTGACCTT
GGCTTCATGGGTCCAAATTATTCAATTTCAACTGCCTGTGCGACCTCCAA
TTATTGCTTTTATGCTGCCGCCAATCACATCCGTCGAGGAGAGGCTGATT
TGATGCTTGCTGGTGGAACTGAAGCAGCCATTATTCCTATTGGATTGGGT
GGTTTTGTTGCATGTAGAGCATTGTCTCAGAGAAATGATGACCCACAAAC
TGCTTCTAGGCCATGGGACAAAGATCGGGATGGCTTTGTCATGGGAGAAG
GTGCTGGAGTATTGGTGATGGAGAGCTTGGAACATGCAATGAAACGAGGT
GCACCGATCATAGCAGAGTACTTAGGGGGTGCTGTTAATTGTGATGCTTA
TCATATGACTGACCCCAGAGCTGATGGACTTGGAGTGTCTTCATGCATTG
AGAGCAGCCTTGAAGATGCTGGTGTGTCACCTGAGGAGGTCAACTACATA
AATGCTCACGCAACTTCCACTTTAGCTGGTGACCTGGCTGAGATAAATGC
TATTAA
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