CB290447

Overview
NameCB290447
Unique NameCB290447
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290447 vs. ExPASy Swiss-Prot
Match: KCAB3_HUMAN (Voltage-gated potassium channel subunit beta-3 OS=Homo sapiens GN=KCNAB3 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.005e-13
Identity = 69/261 (26.44%), Postives = 118/261 (45.21%), Query Frame = 3
Query:   18 THNSPLPEEDGIAVIKHAFDKGVTFFDTADVYGGPHTNEILVGKALKQLP--RGKIQLATKFGIAGLGDDGCMLVKGTPDYVRSCCEGSLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQMEWSLWTRD-IEEEIVPLCRELGIGIVPYSPIGRGFFAGKAVVESLPADSFVAS-------HPRFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQ 752
            T  S + +E    V+  A++ GV  FDTA+VY        L G  LK     R    + TK    G  +    L +    ++     GSL+RL + Y+D+ F +R D + P+E+ V  +  ++ +G   Y G S      I  A+++       P    Q E  L+ R+ +E ++  L  ++G+G V + P+  G    K   +    D+  AS         + + E+ +K +   + +  +A +  CT AQLA+AW L+
Sbjct:  100 TFGSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTL-GNILKSKGWRRSSYVITTKIFWGGQAETERGLSR---KHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSK--YDGRVPDTCRASIKGYQWLKDKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLR 354          
BLAST of CB290447 vs. ExPASy Swiss-Prot
Match: AAD_PHACH (Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.819e-13
Identity = 49/195 (25.13%), Postives = 96/195 (49.23%), Query Frame = 3
Query:   33 LPEEDGIAVIKHAFDKGVTFFDTADVYGGPHTNEILVGKALKQLP-RGKIQLATKFGIAGLGDDGCMLVKGTPDYVRSCCEG-------SLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAH------AVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRG 575
            + +E    ++   ++ G  F DTA+VY    T+E  +G+ ++    R ++ +ATK+ +          +     YV +  +        SL++L   YID+++ H  D +  IE+ +  L  LV +GK+ Y+G+S+     + +A+         P    + EW++  RD+E +I+P+C   G+ I P++ +  G
Sbjct:   50 MDKEASFKLLDAFYNAGGNFIDTANVYQD-ETSEEFIGEWMEARGNRDQMVVATKYSLVYKRGASFEEIPQKTQYVGNSLKSMHISVHDSLRKLRTSYIDIFYVHFWDYTCTIEEVMNGLHNLVAQGKVLYLGVSDTPAWVVSKANNYARMAGKTPFVIYEGEWNITMRDMERDIIPMCIHEGMAIAPWNVLCAG 243          
BLAST of CB290447 vs. ExPASy Swiss-Prot
Match: ARK72_MOUSE (Aflatoxin B1 aldehyde reductase member 2 OS=Mus musculus GN=Akr7a2 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.514e-13
Identity = 57/196 (29.08%), Postives = 86/196 (43.88%), Query Frame = 3
Query:   54 AVIKHAFDKGVTFFDTADVYGGPHTNEILVGKALKQLPRGKIQLATKFGIAGLGDDGCMLVKGT-----------PDYVRSCCEGSLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFFAGK 590
            A ++   ++G +  DTA +Y    +  IL G  L                 GLG   C +   T           PD VRS  E SLKRL    +DL++ H  D S P+E+T+    +L +EGK   +GLS       A   T+ +++     T  Q  ++  TR +E E++P  R  G+    Y+P+  G   GK
Sbjct:   66 ASVRAFLERGHSELDTAFMYCDGQSENILGGLGL-----------------GLGSGDCTVKIATKANPWEGKSLKPDSVRSQLETSLKRLQCPRVDLFYLHAPDHSTPVEETLRACHQLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVEAELLPCLRHFGLRFYAYNPLAGGLLTGK 244          
BLAST of CB290447 vs. ExPASy Swiss-Prot
Match: ARK73_HUMAN (Aflatoxin B1 aldehyde reductase member 3 OS=Homo sapiens GN=AKR7A3 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.222e-12
Identity = 56/185 (30.27%), Postives = 84/185 (45.41%), Query Frame = 3
Query:   54 AVIKHAFDKGVTFFDTADVYGGPHTNEILVGKALKQLPRGKIQLATKFGIAGLGDDGCMLVKGTPDYVRSCCEGSLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFFAGK 590
            AV +   ++G T  DTA VY    +  IL G  L+    G      K     +   G  L    PD +R   E SLKRL    +DL++ H  D S P+E+T+    +L +EGK   +GLS       A   T+ +++     T  Q  ++  TR +E E+ P  R  G+    ++P+  G   GK
Sbjct:   30 AVTRAFLERGHTEIDTAFVYSEGQSETILGGLGLRL---GGSDCRVKIDTKAIPLFGNSL---KPDSLRFQLETSLKRLQCPRVDLFYLHMPDHSTPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGK 208          
BLAST of CB290447 vs. ExPASy Swiss-Prot
Match: YCSN_BACSU (Uncharacterized oxidoreductase ycsN OS=Bacillus subtilis GN=ycsN PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.406e-12
Identity = 64/257 (24.90%), Postives = 110/257 (42.80%), Query Frame = 3
Query:   51 IAVIKHAFDKGVTFFDTADVYGGPHTNEILVGKALKQLP--RGKIQLATKFGIAGLGDDG----CMLVKGTPDYVRSCCEGSLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEI---VPLCRELGIGIVPYSPIGRGFFAGKAVVESLPADSFVASHPRFKEENLEKNKNIYIRIDNL-AKKHKCTPAQLALAWILQQGDDVLPIPGTSK 791
            +++I+   D G+T FD AD+YGG +T E L G AL   P  R  I+L TK GI     +           +  ++ +  E SL  L  DYID+   HR D  +  E      + L   GK++Y G+S       R   +  P   V  +  L   ++E  +   + LC+E  I  + +SP+  G                     +   EN +K++ +   ++++  +    +  ++  AW+      ++PI G+ K
Sbjct:   33 LSLIEWCIDHGITTFDHADIYGG-YTCEKLFGNALALSPGLRENIELVTKCGIVLESPERPAHRSHHYNTSKSHILASVEQSLMNLRTDYIDMLLIHRPDPLMDPEGVAEAFQALKCSGKVRYFGVSNFKDHQYRMLESYLPEKLVTNQIELSAYELENMLDGTLNLCQEKRIPPMAWSPLAGG---------------------KVFTENTDKDRRVRTALESVQGEIGAASLDEVMYAWLYTHPAGIMPIVGSGK 267          
BLAST of CB290447 vs. ExPASy Swiss-Prot
Match: ARK72_RAT (Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus GN=Akr7a2 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.406e-12
Identity = 55/185 (29.73%), Postives = 83/185 (44.86%), Query Frame = 3
Query:   54 AVIKHAFDKGVTFFDTADVYGGPHTNEILVGKALKQLPRGKIQLATKFGIAGLGDDGCMLVKGTPDYVRSCCEGSLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFFAGK 590
            A ++   ++G+   DTA +Y    +  IL    L     G      K        DG  L    PD VRS  E SLKRL    +DL++ H  D   PI +T+   ++L +EGK   +GLS       A   T+ +++     T  Q  ++  TR +E E++P  R  G+    Y+P+  G   GK
Sbjct:   66 ATVRAFLERGLNELDTAFMYCDGQSESILGSLGLGL---GSGDCTVKIATKANPWDGKSL---KPDSVRSQLETSLKRLQCPRVDLFYLHAPDHGTPIVETLQACQQLHQEGKFVELGLSNYASWEVAEIYTLCKSNGWILPTVYQGMYNATTRQVETELLPCLRYFGLRFYAYNPLAGGLLTGK 244          
BLAST of CB290447 vs. ExPASy Swiss-Prot
Match: AAD3_YEAST (Putative aryl-alcohol dehydrogenase AAD3 OS=Saccharomyces cerevisiae GN=AAD3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.406e-12
Identity = 47/185 (25.41%), Postives = 88/185 (47.57%), Query Frame = 3
Query:  276 SLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFFAGKAVVESLPAD-----SFVASHPRFKEENLEKNKNIYIRIDNLAKKHKC-TPAQLALAWILQQGDDVLPIPGTSKI 794
            SL++L  D+ID+ + H  D    IE+ +  L  LV++GK+ Y+G+S+     +  A      +   P +  Q +W++  RD E +I+P+ R  G+ + P+  +G G F  K  +E    +     SFV +      E  +    I   +  +A++H   +   +A+A++  +  +  P     KI
Sbjct:  133 SLRKLQTDWIDILYVHWWDYMSSIEEFMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSYGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQSKKAMEERRKNGEGIRSFVGA-----SEQTDAEIKISEALAKIAEEHGTESVTAIAIAYVRSKAKNFFPSVEGGKI 312          
BLAST of CB290447 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.228e-11
Identity = 69/253 (27.27%), Postives = 105/253 (41.50%), Query Frame = 3
Query:   36 PEEDGIAVIKHAFDKGVTFFDTADVYGGPHTNEILVGKALKQ--LPRGKIQLATKFGIAGLGDDGCMLVKGTPDYVRSCCEGSLKRLDVDYIDLYFQH-RVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIR----RAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFFAGKAVVESLPADSFVASHPRFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQQGDDVLP 773
            P ED    +  A   G    DTA  YG    NE   G+A+ Q  L R ++ L TK   +  G D  +          +  E S+ RL VDY+DLY  H  V       DT     +L E+G+I+ IG+S   P+ +R        V  +  +++   L  R++ E    L  +LGI    +SP+G+G                + +HP                +  +A+ H  T AQ  + W +Q G+ V+P
Sbjct:   25 PPEDTERAVAAALAAGYRHVDTAAAYG----NEEQTGRAIAQSGLDRSQVYLVTKLWNSEQGYDATL----------AAFEASVDRLGVDYLDLYLIHWPVPEKNLFVDTFKAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRE----LHAQLGIATEAWSPLGQG---------------SLLAHP---------------TVTGVAESHGKTAAQALIRWHMQLGNIVIP 229          
BLAST of CB290447 vs. ExPASy Swiss-Prot
Match: Y1919_MYCSJ (Uncharacterized oxidoreductase Mjls_1919 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1919 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.228e-11
Identity = 69/253 (27.27%), Postives = 105/253 (41.50%), Query Frame = 3
Query:   36 PEEDGIAVIKHAFDKGVTFFDTADVYGGPHTNEILVGKALKQ--LPRGKIQLATKFGIAGLGDDGCMLVKGTPDYVRSCCEGSLKRLDVDYIDLYFQH-RVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIR----RAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFFAGKAVVESLPADSFVASHPRFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQQGDDVLP 773
            P ED    +  A   G    DTA  YG    NE   G+A+ Q  L R ++ L TK   +  G D  +          +  E S+ RL VDY+DLY  H  V       DT     +L E+G+I+ IG+S   P+ +R        V  +  +++   L  R++ E    L  +LGI    +SP+G+G                + +HP                +  +A+ H  T AQ  + W +Q G+ V+P
Sbjct:   25 PPEDTERAVAAALAAGYRHVDTAAAYG----NEEQTGRAIAQSGLDRSQVYLVTKLWNSEQGYDATL----------AAFEASVDRLGVDYLDLYLIHWPVPEKNLFVDTFRAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRE----LHAQLGIATEAWSPLGQG---------------SLLAHP---------------TVTGVAESHGKTAAQALIRWHMQLGNIVIP 229          
BLAST of CB290447 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.097e-11
Identity = 67/249 (26.91%), Postives = 103/249 (41.37%), Query Frame = 3
Query:   36 PEEDGIAVIKHAFDKGVTFFDTADVYGGPHTNEILVGKALKQ--LPRGKIQLATKFGIAGLGDDGCMLVKGTPDYVRSCCEGSLKRLDVDYIDLYFQH-RVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFFAGKAVVESLPADSFVASHPRFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQQGDDVLP 773
            P ED    +  A   G    DTA  Y     NE   G+A+    +PR  I L TK   +  G D  +          +  + S++RL VDY+DLY  H  V  +    DT      L ++G+I+ IG+S   P+ +        I     +  L     ++E+  +  +LGI    +SP+G+G         SL AD                       I  +A++H  TPAQ+ + W +Q G+ V+P
Sbjct:   24 PAEDTERAVAAALQAGYRHIDTAAAY----RNETETGRAIANSGVPREDIFLVTKLWNSDQGYDATL----------AAFDASVQRLGVDYLDLYLIHWPVPENNKFVDTFKAFAHLRDQGRIRSIGVSNFEPEHLTTLIEETGIVPAVNQIELHPLLPQQELRDVHAKLGIATEAWSPLGQG---------SLLADPV---------------------ITGIAEQHGKTPAQVLIRWHIQLGNIVIP 228          
The following BLAST results are available for this feature:
BLAST of CB290447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
KCAB3_HUMAN1.005e-1326.44Voltage-gated potassium channel subunit beta-3 OS=... [more]
AAD_PHACH3.819e-1325.13Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaet... [more]
ARK72_MOUSE6.514e-1329.08Aflatoxin B1 aldehyde reductase member 2 OS=Mus mu... [more]
ARK73_HUMAN4.222e-1230.27Aflatoxin B1 aldehyde reductase member 3 OS=Homo s... [more]
YCSN_BACSU9.406e-1224.90Uncharacterized oxidoreductase ycsN OS=Bacillus su... [more]
ARK72_RAT9.406e-1229.73Aflatoxin B1 aldehyde reductase member 2 OS=Rattus... [more]
AAD3_YEAST9.406e-1225.41Putative aryl-alcohol dehydrogenase AAD3 OS=Saccha... [more]
Y1985_MYCSK1.228e-1127.27Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]
Y1919_MYCSJ1.228e-1127.27Uncharacterized oxidoreductase Mjls_1919 OS=Mycoba... [more]
Y2408_MYCS26.097e-1126.91Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01be09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01be09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290447 ID=CB290447; Name=CB290447; organism=Citrus sinensis; type=EST; length=794bp
GCACTAGGCTGAATGGAACTCACAATTCTCCACTCCCAGAAGAAGATGGC
ATCGCGGTAATAAAGCATGCTTTCGATAAAGGAGTCACTTTCTTTGATAC
CGCTGATGTATATGGTGGACCGCATACTAATGAAATATTGGTCGGAAAGG
CCTTAAAGCAGTTGCCGAGAGGAAAAATACAACTGGCTACAAAGTTTGGC
ATTGCTGGATTGGGAGATGATGGTTGTATGCTCGTGAAGGGTACCCCTGA
TTATGTGCGATCATGTTGTGAGGGTAGCTTGAAACGCCTTGATGTGGACT
ACATTGATCTCTATTTTCAGCATAGAGTAGACACATCTGTTCCCATAGAA
GACACAGTTGGTGAACTTAAGAAGCTGGTTGAGGAGGGAAAAATCAAGTA
CATTGGATTATCAGAGGCCAGTCCTGACACAATTAGGAGAGCACATGCAG
TTCATCCCATCACAGCTGTACAAATGGAATGGTCCCTCTGGACTCGTGAC
ATTGAGGAAGAGATAGTGCCGCTCTGCAGGGAGCTTGGCATTGGAATTGT
TCCTTACAGTCCTATTGGTCGTGGATTTTTTGCTGGCAAAGCTGTCGTGG
AAAGTTTGCCTGCTGATAGCTTTGTGGCTTCACATCCTCGGTTCAAGGAA
GAGAATCTGGAGAAGAATAAGAACATCTATATCCGCATAGATAACCTTGC
CAAAAAGCACAAATGCACTCCTGCACAATTAGCACTGGCATGGATTCTCC
AACAAGGAGACGATGTCCTACCTATCCCTGGAACAAGTAAGATT
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