CB290450

Overview
NameCB290450
Unique NameCB290450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290450 vs. ExPASy Swiss-Prot
Match: ADH6_YEAST (NADP-dependent alcohol dehydrogenase 6 OS=Saccharomyces cerevisiae GN=ADH6 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.461e-40
Identity = 86/205 (41.95%), Postives = 116/205 (56.59%), Query Frame = 1
Query:  163 EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 774
            + D+  K+  CG+C SD+H     WGN   P+V GHEIVG V ++G K  S  KVG +VGVG  V SC  CD C  D E YC K + TY+  Y DG ++ GGY++ +   EHFVV IPE  P    APLLC G+TVYSPL   G   PG                  +KAMG +  VIS S  K+ +A+ ++GAD ++ + ++ +
Sbjct:   33 DHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCG-PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEEGD 235          
BLAST of CB290450 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.392e-36
Identity = 84/263 (31.94%), Postives = 133/263 (50.57%), Query Frame = 1
Query:   43 IHSEMGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYH--------DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 807
            + +E  ++P++     A G+   D    +    F R+     +V+ ++ + GICHSD H I  EW    +P++PGHE++G V ++G  V K+ +GD V V  ++ SC  C  C   +E +C        N+           G ITYGGYS+I++  +HFV + P+   ++  APL+CAG T YSPLR   +  PGM               K AKAMG  V  I+ +  K  +++  LGA+  ++S +  +M    G+ D I
Sbjct:   58 LKNEYQKSPDK---MTALGFGVTDVGKPVELLVFDRKKPTNNEVSIEIYYTGICHSDWHFIVGEW-KADFPLIPGHELIGRVIDIGPNVDKYSIGDIVCVSPVIDSCGHCKMCTHHIEQHCMNGATEIYNQKTRLPGDIKPSGPITYGGYSNIVIIKQHFVYKFPKNLDIERCAPLMCAGATTYSPLRQAKVG-PGMKVGIVGIGGLGHIAVKIAKAMGAHVVAITRTEWKFKDSVNNLGANESILSTNVWQMNQHKGSFDFI 315          
BLAST of CB290450 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 2.013e-33
Identity = 81/237 (34.18%), Postives = 124/237 (52.32%), Query Frame = 1
Query:  100 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK--FKVGDKVGVGCMVGSCHSCDSCAIDLENYCPK-VIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 801
            +AAK+  G L  + +       +DV  +V +CGICHSDL MI NEWG + YP+V GHE++G V  +GS       +VG +VG+G    SC  CD+C    +  C +  + T  N+        GG+++ + AD  +V+ +PE   +++  PLLC GITV+ PL  + +                    K   AMG +VT  S++P+K+ E +  +GAD  + SRD   ++A  G  D
Sbjct:    7 YAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNR--------GGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATS-RVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVL-AMGADKVVNSRDPQALKALAGQFD 233          
BLAST of CB290450 vs. ExPASy Swiss-Prot
Match: ADH7_YEAST (NADP-dependent alcohol dehydrogenase 7 OS=Saccharomyces cerevisiae GN=ADH7 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.305e-32
Identity = 79/206 (38.35%), Postives = 109/206 (52.91%), Query Frame = 1
Query:  142 FSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKV-IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL 753
            F  +  G+ DV  ++  CGIC SD H+    WG      + GHEI+G V +VGSK  +  K+GD+VGVG    +C  C+ C  D E YC    ++T    Y DG I+ GG++  +   EHF ++IPE  P    APLLC GITV+SPL   G   PG                  AKAMG +V   S   SK+ +++ +LGAD ++
Sbjct:   26 FDPKPFGDHDVDVEIEACGICGSDFHIAVGNWGPVPENQILGHEIIGRVVKVGSKCHTGVKIGDRVGVGAQALACFECERCKSDNEQYCTNDHVLTMWTPYKDGYISQGGFASHVRLHEHFAIQIPENIPSPLAAPLLCGGITVFSPLLRNGCG-PGKRVGIVGIGGIGHMGILLAKAMGAEVYAFSRGHSKREDSM-KLGADHYI 229          
BLAST of CB290450 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.547e-28
Identity = 70/216 (32.41%), Postives = 108/216 (50.00%), Query Frame = 1
Query:  163 EKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 807
            E +V  K+  CG+CH+DLH    +W      P++PGHE VG+V EV   V   KVGD+VG+  +  +C  C+ C    E  CP       ++ + G    GGY++   A   +V +IP+       AP+LCAG+T Y  L+  G  +PG                ++AKAMG+ V  +  S  +KS+  + LGAD  +    +D ++A    + G+
Sbjct:   25 EGEVLVKIEACGVCHTDLHAAHGDWPIKPKLPLIPGHEGVGIVVEVAKGVKSIKVGDRVGIPWLYSACGECEYCLTGQETLCP-------HQLNGGYSVDGGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTTYKALKVSGA-RPGEWVAIYGIGGLGHIALQYAKAMGLNVVAVDIS-DEKSKLAKDLGADIAINGLKEDPVKAIHDQVGGV 231          
BLAST of CB290450 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.264e-27
Identity = 69/214 (32.24%), Postives = 106/214 (49.53%), Query Frame = 1
Query:  169 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 807
            +V  ++  CG+CH+DLH    +W      P++PGHE VGV+ EVG  V+  KVGD+VG+  +  +C  CD C    E  C +       + + G    GGY++   A   +VV+IP+    +  AP+ CAG+T Y  L+  G  KPG                ++AKAMG+ V  +     +K E  ++LGAD  +  +  D  Q     + G+
Sbjct:   27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGVIEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCER-------QQNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDLG-DEKLELAKQLGADLVVNPKHDDAAQWIKEKVGGV 231          
BLAST of CB290450 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.070e-26
Identity = 66/193 (34.20%), Postives = 98/193 (50.78%), Query Frame = 1
Query:  169 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGAD 744
            +V  ++  CG+CH+DLH    +W      P++PGHE VG+V EVG  V+  KVGD+VG+  +  +C  CD C    E  C        ++ + G    GGY++   A   +VV+IP+    +  AP+ CAG+T Y  L+  G  KPG                ++AKAMG+ V  +     +K E  + LGAD
Sbjct:   27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC-------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG-DEKLELAKELGAD 210          
BLAST of CB290450 vs. ExPASy Swiss-Prot
Match: ADH_SCHPO (Alcohol dehydrogenase OS=Schizosaccharomyces pombe GN=adh1 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.183e-25
Identity = 66/217 (30.41%), Postives = 109/217 (50.23%), Query Frame = 1
Query:  160 GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMDG 804
            G+ +V   + + G+CH+DLH ++ +W      P++ GHE  GVV +VG+ V++ K+GD+VGV  M  SC +C+ C    E  CP + ++       G    G +    +A+      IPE  PL+  AP++CAGIT Y  L+   +                    ++AKAM ++V  I T    K+E ++  GA+ FL   ++ D ++A     +G
Sbjct:   32 GQDEVLVNIKYTGVCHTDLHALQGDWPLPAKMPLIGGHEGAGVVVKVGAGVTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHIQLS-------GYTVDGTFQHYCIANATHATIIPESVPLEVAAPIMCAGITCYRALKESKVGPGEWICIPGAGGGLGHLAVQYAKAMAMRVVAIDTG-DDKAELVKSFGAEVFLDFKKEADMIEAVKAATNG 240          
BLAST of CB290450 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.635e-25
Identity = 64/199 (32.16%), Postives = 102/199 (51.26%), Query Frame = 1
Query:  160 GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL 753
            G  ++  KV + G+CH+DLH +K +W   +  P+V GHE  GVV   G  V++F++GD  G+  + GSC +C+ C    E  CP   ++       G    G +    +       ++P+  PLDA AP+LCAGITVY  L+  G+                    ++AKAMG++V  I     K++   E+LGA++++
Sbjct:   30 GPDEILVKVRYSGVCHTDLHALKGDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNASLS-------GYTVDGTFQQYAIGKATHASKLPKNVPLDAVAPVLCAGITVYKGLKESGVRPGQTVAIVGAGGGLGSLALQYAKAMGIRVVAIDGGEEKQA-MCEQLGAEAYV 220          
BLAST of CB290450 vs. ExPASy Swiss-Prot
Match: ADH2_KLULA (Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN=ADH2 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.001e-24
Identity = 72/219 (32.88%), Postives = 110/219 (50.23%), Query Frame = 1
Query:  169 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---VSRD--QDEMQAAMGTMDGI 807
            ++   V + G+CH+DLH  K +W   T  P+V GHE  GVV  +G  V  + +GD  G+  + GSC SC+ C +  E+ CP   +  +   HDG+     +     AD     RIP+GT L   AP+LCAG+TVY  L+   L                    ++AKAMG +V  I T  ++K++  + LG + F+   VS+D  ++ + A  G   G+
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADL--SGYTHDGS-----FQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALKSADLKAGDWVAISGACGGLGSLAIQYAKAMGYRVLGIDTG-AEKAKLFKELGGEYFVDYAVSKDLIKEIVDATNGGAHGV 243          
The following BLAST results are available for this feature:
BLAST of CB290450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
ADH6_YEAST6.461e-4041.95NADP-dependent alcohol dehydrogenase 6 OS=Saccharo... [more]
YL498_MIMIV7.392e-3631.94Probable zinc-type alcohol dehydrogenase-like prot... [more]
YJGB_ECOLI2.013e-3334.18Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH7_YEAST1.305e-3238.35NADP-dependent alcohol dehydrogenase 7 OS=Saccharo... [more]
ADH2_BACST2.547e-2832.41Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_BACST1.264e-2732.24Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH3_BACST1.070e-2634.20Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH_SCHPO1.183e-2530.41Alcohol dehydrogenase OS=Schizosaccharomyces pombe... [more]
ADH1_ASPFN2.635e-2532.16Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADH2_KLULA1.001e-2432.88Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01be11_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01be11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290450 ID=CB290450; Name=CB290450; organism=Citrus sinensis; type=EST; length=809bp
GCCCTATGGTCAAACTAAGCCAACAAACACCGATATCATTAAATTCATTC
TGAAATGGGGCAAGCACCGGAGCAAGAGCACCCTAAGAACGCCTTTGGAT
GGGCTGCCAAGGACACTTCTGGCGTTCTCTCCCCCTTTCACTTCTCCAGA
AGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTAACTCACTGTGGGAT
ATGCCATTCAGATCTTCACATGATAAAAAATGAATGGGGCAATACCATTT
ACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGA
AGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCAT
GGTGGGATCATGCCACTCTTGTGATAGCTGCGCCATTGATCTTGAGAACT
ACTGCCCCAAAGTTATAATGACCTATGCCAACAAGTACCATGATGGAACC
ATCACATACGGAGGCTACTCTGACATTATGGTTGCCGATGAGCACTTTGT
GGTCCGTATTCCTGAAGGCACACCACTTGACGCCACTGCCCCTCTCCTCT
GTGCTGGTATCACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAG
CCTGGTATGCATGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGC
CGTCAAATTCGCAAAGGCTATGGGGGTCAAGGTGACTGTGATCAGTACCT
CCCCTAGCAAGAAGAGTGAAGCCATTGAACGTCTTGGCGCTGATTCCTTT
TTGGTCAGTCGTGATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGA
TGGTATTAT
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