CB290456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA4_MAIZE (Glutamine synthetase root isozyme 4 OS=Zea mays GN=GLN5 PE=2 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.076e-93 Identity = 164/189 (86.77%), Postives = 177/189 (93.65%), Query Frame = -1 Query: 276 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 842 GRDIV++HYKACLYAGINISGINGEVMPGQWEFQVGP VGISSGDQ+W+ARYILERITEIAGVV++FDPKPI GDWNGAGAH NYST+SMR +GG +VIK AIEKL RH EHIAAYGEGNERRLTGRHETADINTFSWGVANRGAS+ VG+ TE+ GKGYFEDRRPASNMDPYVVTSMIAETTI+WKP Sbjct: 168 GRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTESMRKEGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASVAVGQ-TEQNGKGYFEDRRPASNMDPYVVTSMIAETTIVWKP 355
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA1_DAUCA (Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 4.090e-93 Identity = 160/186 (86.02%), Postives = 175/186 (94.09%), Query Frame = -1 Query: 285 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 842 GRDIV++HYKACLYAGINISGINGEVMPGQWEFQVGP VGIS+GD+LW+ARYILERITEIAGVV+S DPKPI GDWNGAGAH NYSTKSMRN+GG ++IKKAI KL +H +HIAAYGEGNERRLTG+HETA I+ FSWGVANRGAS+RVGRDTEKEGKGYFEDRRPASNM+PYVVTSMIAETTIL Sbjct: 167 GRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKSMRNEGGFEIIKKAIAKLETKHAQHIAAYGEGNERRLTGKHETASIHKFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMEPYVVTSMIAETTIL 352
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA_NICPL (Glutamine synthetase OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 5.905e-92 Identity = 160/188 (85.11%), Postives = 175/188 (93.09%), Query Frame = -1 Query: 279 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWK 842 GRDIV+SHYKA LYAGINISGINGEVMPGQWEFQVGP VGIS+GD++W+ARYILERI EIAGVV+SFDPKPI GDWNGAGAH NYSTKSMR DGG +VI KAIEKLG +H EHIAAYGEGNERRLTG+HETA+I+TF WGVANRGAS+RVGRDTEK GKGYFEDRRPASNMDPYVVT+MIA+TTI+ K Sbjct: 168 GRDIVDSHYKAYLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEVWVARYILERIAEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMREDGGYEVILKAIEKLGLKHKEHIAAYGEGNERRLTGKHETANISTFKWGVANRGASVRVGRDTEKAGKGYFEDRRPASNMDPYVVTAMIADTTIIGK 355
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLN15_ARATH (Glutamine synthetase cytosolic isozyme 1-5 OS=Arabidopsis thaliana GN=GLN1-5 PE=2 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 7.219e-90 Identity = 151/186 (81.18%), Postives = 174/186 (93.55%), Query Frame = -1 Query: 285 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 842 GRDIV++HYKACLY+G++I G NGEVMPGQWEFQ+ P VGI +GDQLW+ARYILERITEI GV++SFDPKPI+GDWNGA AH N+STKSMR DGG+D+IK+AI+KL +H +HIAAYGEGNERRLTG+HETADINTFSWGVA+RGAS+RVGRDTEKEGKGYFEDRRP+SNMDPY+VTSMIAETTIL Sbjct: 168 GRDIVDAHYKACLYSGLSIGGANGEVMPGQWEFQISPTVGIGAGDQLWVARYILERITEICGVIVSFDPKPIQGDWNGAAAHTNFSTKSMRKDGGLDLIKEAIKKLEVKHKQHIAAYGEGNERRLTGKHETADINTFSWGVADRGASVRVGRDTEKEGKGYFEDRRPSSNMDPYLVTSMIAETTIL 353
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA4_PHAVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 4.679e-89 Identity = 152/189 (80.42%), Postives = 168/189 (88.89%), Query Frame = -1 Query: 276 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 842 GRDI ++HYKACL+AGINISG NGEVMPGQWE+QVGP VGI +GD +W +RYILERITE AGVVLS DPKPI+GDWNGAG H NYSTKSMR DGG +VIKKAI L RH EHI+AYGEGNERRLTG+HETA INTFSWGVANRG SIRVGRDTEK GKGY EDRRPASNMDPYVVTS++AE+T+LW+P Sbjct: 225 GRDISDAHYKACLFAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWASRYILERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASINTFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTSLLAESTLLWEP 413
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNAC_BRANA (Glutamine synthetase, chloroplastic OS=Brassica napus GN=GLN2 PE=2 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 1.361e-88 Identity = 151/189 (79.89%), Postives = 168/189 (88.89%), Query Frame = -1 Query: 276 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 842 GRDI ++HYKACLYAGINISG NGEVMPGQWEFQVGP VGI +GD +W ARY+LERITE AGVVL+ DPKPI+GDWNGAG H NYSTKSMR DGG +VIKKAI L RH EHI+AYGEGNERRLTG+HETA I+ FSWGVANRG SIRVGRDTEK+GKGY EDRRPASNMDPY+VTS++AETT+LW+P Sbjct: 224 GRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHVWCARYLLERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHMEHISAYGEGNERRLTGKHETASIDQFSWGVANRGCSIRVGRDTEKKGKGYLEDRRPASNMDPYIVTSLLAETTLLWEP 412
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA2_DAUCA (Glutamine synthetase, chloroplastic OS=Daucus carota GN=GLN2 PE=2 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 6.757e-88 Identity = 150/189 (79.37%), Postives = 167/189 (88.36%), Query Frame = -1 Query: 276 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 842 GRDI ++HYKACLYAGINISG NGEVMPGQWEFQVGP VGI +GD +W ARY+LERITE AGVVL+ DPKPI GDWNGAG H NYSTKSMR +GG +VIKKAI L RH EHI+AYGEGNERRLTG+HETA I++FSWGVA+RG SIRVGRDTEKEGKGY EDRRPASNMDPYVVT ++AETT+LW+P Sbjct: 228 GRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYLLERITEQAGVVLTLDPKPIDGDWNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVADRGCSIRVGRDTEKEGKGYLEDRRPASNMDPYVVTGLLAETTLLWEP 416
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA2_MEDSA (Glutamine synthetase leaf isozyme, chloroplastic OS=Medicago sativa GN=GS2 PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 8.824e-88 Identity = 150/189 (79.37%), Postives = 166/189 (87.83%), Query Frame = -1 Query: 276 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 842 GRDI ++HYKACLYAGINISG NGEVMPGQWE+QVGP VGI +GD +W +RYILERITE AGVVL+ DPKPI+GDWNGAG H NYSTKSMR DGG +VIKKAI L RH HI AYGEGNERRLTG+HETA INTFSWGVANRG SIRVGRDTEK GKGY EDRRPASNMDPYVVT+++AE+T+LW+P Sbjct: 224 GRDISDAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWASRYILERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHKVHIEAYGEGNERRLTGKHETASINTFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTALLAESTLLWEP 412
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA2_ARATH (Glutamine synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GLN2 PE=1 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.505e-87 Identity = 149/189 (78.84%), Postives = 167/189 (88.36%), Query Frame = -1 Query: 276 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 842 GRDI ++HYKACLYAGINISG NGEVMPGQWEFQVGP VGI +GD +W ARY+LERITE AGVVL+ DPKPI+GDWNGAG H NYSTKSMR +GG +VIKKAI L RH EHI+AYGEGNERRLTG+HETA I+ FSWGVANRG SIRVGRDTE +GKGY EDRRPASNMDPY+VTS++AETT+LW+P Sbjct: 226 GRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDQFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYIVTSLLAETTLLWEP 414
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA2_PEA (Glutamine synthetase leaf isozyme, chloroplastic OS=Pisum sativum GN=GS2 PE=2 SV=2) HSP 1 Score: 320.087 bits (819), Expect = 9.757e-87 Identity = 148/189 (78.31%), Postives = 165/189 (87.30%), Query Frame = -1 Query: 276 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 842 GRDI ++HYKAC+YAGINISG NGEVMPGQWE+QVGP VGI +GD +W +RYILERITE AGVVL+ DPKPI+GDWNGAG H NYSTKSMR DGG +VIKKAI L RH HI AYGEGNERRLTG+HETA IN FSWGVANRG SIRVGRDTEK GKGY EDRRPASNMDPYVVT+++AE+T+LW+P Sbjct: 226 GRDISDAHYKACIYAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWASRYILERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHKIHIEAYGEGNERRLTGKHETASINDFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTALLAESTLLWEP 414 The following BLAST results are available for this feature:
BLAST of CB290456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290456 ID=CB290456; Name=CB290456; organism=Citrus sinensis; type=EST; length=842bpback to top |