CB290456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA2_CHLRE (Glutamine synthetase, chloroplastic OS=Chlamydomonas reinhardtii GN=GLN2 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.120e-57 Identity = 102/186 (54.84%), Postives = 139/186 (74.73%), Query Frame = -1 Query: 288 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIK-GDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTI 842 GR + +H +AC+ AG+ ISGIN EVMPGQWE+Q+GP ++ GD++ ++R++L R+ E G+V +F+PKP++ GDWNG GAH N+STK MR GG+ VI++A+EKL K H EHI YG GNE RLTG+HET DINTF GVA+RG+SIR+ +G GY EDRRPA+N+DPY V ++ +T + Sbjct: 193 GRPLAEAHMEACMKAGLVISGINAEVMPGQWEYQIGPVGPLALGDEVMLSRWLLHRLGEDFGIVSTFNPKPVRTGDWNGTGAHTNFSTKGMRVPGGMKVIEEAVEKLSKTHIEHITQYGIGNEARLTGKHETCDINTFKHGVADRGSSIRIPLPVMLKGYGYLEDRRPAANVDPYTVARLLIKTVL 378
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA_CRIGR (Glutamine synthetase OS=Cricetulus griseus GN=GLUL PE=2 SV=4) HSP 1 Score: 222.246 bits (565), Expect = 2.769e-57 Identity = 107/189 (56.61%), Postives = 135/189 (71.43%), Query Frame = -1 Query: 285 RDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 839 RDI+ +HY+ACLYAG+ I+G EV QWEFQ+GPC GI GD LW+AR+IL R+ + GV+ +FD KPI G+WNGAG H N+STK+MR + G+ IK+AIEKL KRH HI AY G N RRLTG H+T++IN FS GVA+R ASIR+ R +E KGYFE R P++N DP+ VT I T +L Sbjct: 173 RDIMEAHYRACLYAGVKITGTYAEVKHAQWEFQIGPCEGIRMGDHLWVARFILHRVCKDFGVIATFDSKPIPGNWNGAGCHTNFSTKTMREENGLKHIKEAIEKLSKRHRYHIRAYDPKGGLDNARRLTGFHKTSNINDFSAGVADRSASIRIPRTVGQEKKGYFEARCPSANCDPFAVTEAIVRTCLL 361
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA2_STRVR (Glutamine synthetase 2 OS=Streptomyces viridochromogenes GN=glnII PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.857e-53 Identity = 102/185 (55.14%), Postives = 130/185 (70.27%), Query Frame = -1 Query: 294 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGK--RHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 842 GRD+V +H CL AG+ ISGIN EVMPGQWEFQVGP + D LW+AR++L R E V + DPKP+KGDWNGAGAH N+STK+MR D I A E LG+ + +H+ YG G + RLTG HETA N +S+GV++RGAS+R+ EK+GKGY EDRRP +N+DPYVVT ++ +T Sbjct: 150 GRDVVEAHLDNCLKAGLAISGINAEVMPGQWEFQVGPVSPLEVSDHLWVARWLLYRTAEDFDVAATLDPKPVKGDWNGAGAHTNFSTKAMRE--SYDAIITAAESLGEGSKPLDHVKNYGAGIDDRLTGLHETAPWNEYSYGVSDRGASVRIPWQVEKDGKGYIEDRRPNANVDPYVVTRLLVDT 332
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA2_FRAAL (Glutamine synthetase 2 OS=Frankia alni GN=glnII PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.872e-51 Identity = 99/183 (54.10%), Postives = 124/183 (67.76%), Query Frame = -1 Query: 294 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 842 GR IV H +ACL AG+ I G N EVM GQWEFQ+G + GDQ+W+ R++L RI E GV +SF KPI GDWNGAGAH N+STK G D I E LG R EH+ YG+G E RLTG+HETA N +SWG ++RGAS+R+ EK KG+ EDRRP +NMDPY+VT+++ +T Sbjct: 145 GRQIVERHTQACLDAGLAIEGTNAEVMMGQWEFQIGVLPAPAIGDQIWLGRWLLHRIAEDYGVEVSFAAKPIPGDWNGAGAHTNFSTKQTME--GWDAIVTCCEALGTRVTEHVTHYGKGIEDRLTGKHETAPWNKYSWGASDRGASVRIPWAVEKAKKGWLEDRRPNANMDPYLVTALMIDT 325
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA2_STRHY (Glutamine synthetase 2 OS=Streptomyces hygroscopicus GN=glnB PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.605e-51 Identity = 99/185 (53.51%), Postives = 126/185 (68.11%), Query Frame = -1 Query: 294 GRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGK--RHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 842 GR+IV H CL AG+ +SGIN EVMPGQWEFQVG + D +W+AR++L R+ E GV S D KP KGDWNGAGAH N+ST++MR G D I A E LG+ + EH+ YG G E RLTG HETA + +S+G ++RGAS+R+ E E KGY EDRRP +N+DPYVVT ++ +T Sbjct: 147 GREIVEKHLDLCLAAGLGLSGINAEVMPGQWEFQVGALPPLEVSDHMWVARWLLHRVAEEFGVTASLDAKPAKGDWNGAGAHTNFSTRAMRE--GYDPIITACEALGQDDKPLEHVRQYGTGIEDRLTGAHETAPWDAYSYGASDRGASVRIPWQVEVEKKGYIEDRRPNANVDPYVVTRLMVDT 329
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA2_BRAJA (Glutamine synthetase 2 OS=Bradyrhizobium japonicum GN=glnII PE=3 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 1.334e-43 Identity = 92/184 (50.00%), Postives = 116/184 (63.04%), Query Frame = -1 Query: 294 RDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKG-DWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEG-KGYFEDRRPASNMDPYVVTSMIAET 839 R IV H CL AGIN GIN EV GQWEFQ+ + D++WMARY++ R+TE G+ + F KP+ DWNG+G HAN+ST+ MR GG + + + K +HIA YG N++RLTG+HETA N FS+GVA+RGASIRV G KGY EDRRP S DPY + S I +T Sbjct: 149 RKIVEEHLDLCLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADEMWMARYLMLRLTEKYGIDIEFHCKPLGDTDWNGSGMHANFSTEYMRTVGGKEYFEALMAAFDKNLMDHIAVYGPDNDKRLTGKHETAPWNKFSYGVADRGASIRVPHSFVNNGYKGYLEDRRPNSQGDPYQIASQILKT 332
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA2_RHILP (Glutamine synthetase 2 OS=Rhizobium leguminosarum bv. phaseoli GN=glnII PE=1 SV=3) HSP 1 Score: 172.94 bits (437), Expect = 1.926e-42 Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = -1 Query: 315 RDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKG-DWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRD-TEKEGKGYFEDRRPASNMDPYVV 839 R+IV H CL AGIN GIN EV GQWEFQ+ + DQ+WMARY+L+R+TE G+ + + KP+ DWNG+G H N+STK +R GG + + + K +HIA YG N++RLTG+HETA N FS+GVA+RGASIRV + + KGY EDRRP S DPY + Sbjct: 146 REIVEEHLDLCLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADQIWMARYLLQRLTEKYGIDIEYHCKPLGDTDWNGSGMHCNFSTKYLREVGGKEYFEALMASSDKNLMDHIAVYGPDNDKRLTGKHETAPWNKFSYGVADRGASIRVPHSFIKNDYKGYLEDRRPNSQGDPYQI 322
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA2_RHIME (Glutamine synthetase 2 OS=Rhizobium meliloti GN=glnII PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.839e-36 Identity = 83/175 (47.43%), Postives = 103/175 (58.86%), Query Frame = -1 Query: 321 RDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKG-DWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRD-TEKEGKGYFEDRRPASNMDPY 839 R IV H CL AGIN GIN EV GQWEFQ+ + D++ +ARY+L R+TE G+ + F KP+ DWNG+G HAN+ST +R GG D + + K +HI YG N RLTG+HETA + FS+GVA+RGASIRV GY EDRR S DPY Sbjct: 149 RQIVEEHLDICLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADEVCVARYLLVRLTEKYGIDVEFHCKPLGDTDWNGSGMHANFSTAYLREVGGQDYFEALMAAFEKNLHDHINVYGPDNHLRLTGKHETAPWDKFSYGVADRGASIRVPHSFVNNAYPGYLEDRRANSQGDPY 323
BLAST of CB290456 vs. ExPASy Swiss-Prot
Match: GLNA_VITSX (Glutamine synthetase (Fragments) OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.682e-11 Identity = 36/54 (66.67%), Postives = 38/54 (70.37%), Query Frame = -1 Query: 411 RNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANR 572 +NDGG +VIKK H EHIAAYGEGNER HETADINTF WGVANR Sbjct: 11 KNDGGFEVIKK--------HKEHIAAYGEGNER-----HETADINTFLWGVANR 51 The following BLAST results are available for this feature:
BLAST of CB290456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290456 ID=CB290456; Name=CB290456; organism=Citrus sinensis; type=EST; length=842bpback to top |