CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SYNE7 (Elongation factor Tu OS=Synechococcus elongatus (strain PCC 7942) GN=tuf PE=3 SV=2) HSP 1 Score: 275.404 bits (703), Expect = 2.025e-73 Identity = 130/180 (72.22%), Postives = 158/180 (87.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 +ITGRGTVATGR+ERG++KVGET+++VGL++TR+ TVTGVEMFQKTLDE +AGDNVGLLLRG+QK DI+RGMVLAKPG+ITPHTKF + VYVLKKEEGGRH+PFF GYRPQF +RT DVTG +S D ++MV+PGDR+KM VELI P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 230 TITGRGTVATGRIERGSVKVGETIEIVGLRDTRSTTVTGVEMFQKTLDEGLAGDNVGLLLRGIQKTDIERGMVLAKPGSITPHTKFESEVYVLKKEEGGRHTPFFPGYRPQFYVRTTDVTGAISDFTADDGSAAEMVIPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKILQ 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJB (Elongation factor Tu OS=Synechococcus sp. GN=tuf PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.645e-73 Identity = 134/180 (74.44%), Postives = 156/180 (86.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG IKVGETV+LVGL+ETR+ TVTG+EMFQKTLDE +AGDNVG+LLRG+QK +++RGMVLAKP TITPHT F + VYVLKKEEGGRH+PFFAGYRPQF +RT DVTG +S D + +MVMPGDRVKM VELI P+A EQGMRFAIREGG+TVGAGV+ I++ Sbjct: 230 SITGRGTVATGRIERGRIKVGETVELVGLRETRSTTVTGLEMFQKTLDEGIAGDNVGVLLRGIQKNEVERGMVLAKPKTITPHTNFESEVYVLKKEEGGRHTPFFAGYRPQFYVRTTDVTGTISSFTADDGSQPEMVMPGDRVKMTVELIQPIAIEQGMRFAIREGGRTVGAGVVSKILK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_OSTTA (Elongation factor Tu, chloroplastic OS=Ostreococcus tauri GN=tufA PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.645e-73 Identity = 131/180 (72.78%), Postives = 160/180 (88.89%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERGT+KVG +++++G +TR TVTG+EMFQKTL+E++AGDNVG+LLRG+QK DI+RGMVLA+PGTITPHTKF A VYVLKKEEGGRH+PFF GYRPQF +RT DVTG++ ++D+ +E+ MVMPGDRVKMVVELI P+A E GMRFAIREGG+TVGAGV+ SI++ Sbjct: 230 SITGRGTVATGRVERGTVKVGASIEIIGYVDTRVATVTGLEMFQKTLEESVAGDNVGVLLRGIQKEDIERGMVLAQPGTITPHTKFEAQVYVLKKEEGGRHTPFFPGYRPQFYVRTTDVTGKIESFISDEGDEATMVMPGDRVKMVVELIQPIAIENGMRFAIREGGRTVGAGVVSSILK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_ACAM1 (Elongation factor Tu OS=Acaryochloris marina (strain MBIC 11017) GN=tuf PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 7.696e-73 Identity = 132/180 (73.33%), Postives = 156/180 (86.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG + VGETV+LVG+++TR+ TVTGVEMFQKTLDE MAGDNVGLLLRGVQK DI+RGMVLAKPG+ITPHT+F + VY+LKK+EGGRH+PFF GYRPQF +RT DVTG +S D ++MVMPGDR+KM VELI P+A EQGMRFAIREGG+TVGAGV+ I++ Sbjct: 230 SITGRGTVATGRIERGKVVVGETVELVGIRDTRSTTVTGVEMFQKTLDEGMAGDNVGLLLRGVQKEDIERGMVLAKPGSITPHTQFESEVYILKKDEGGRHTPFFPGYRPQFYVRTTDVTGTISAFTADDGSAAEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTVGAGVVSKILK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJA (Elongation factor Tu OS=Synechococcus sp. (strain JA-3-3Ab) GN=tuf PE=3 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.313e-72 Identity = 132/180 (73.33%), Postives = 157/180 (87.22%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG IKVGETV+LVGL+ETR+ TVTG+EMFQKTLDE +AGDNVG+LLRG+QK +++RGMVLAKP TITPHT+F + VYVLKKEEGGRH+PFFAGYRPQF +RT DVTG ++ D + +MVMPGDRV+M VELI P+A EQGMRFAIREGG+TVGAGV+ I++ Sbjct: 230 SITGRGTVATGRIERGRIKVGETVELVGLRETRSTTVTGLEMFQKTLDEGIAGDNVGVLLRGIQKNEVERGMVLAKPKTITPHTQFESEVYVLKKEEGGRHTPFFAGYRPQFYVRTTDVTGTITSFTADDGSKPEMVMPGDRVRMTVELIQPIAIEQGMRFAIREGGRTVGAGVVSKILK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SYNPW (Elongation factor Tu OS=Synechococcus sp. (strain WH7803) GN=tuf PE=3 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.239e-72 Identity = 131/180 (72.78%), Postives = 153/180 (85.00%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KVGE +++VG+K+TR TVTGVEMF+K LDE MAGDNVGLLLRG+QK DI+RGMVL KPG+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQF +RT DVTG+++ D + +MVMPGDR+KM ELI PVA EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 220 SITGRGTVATGRIERGIVKVGEEIEIVGIKDTRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKPGSITPHTKFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGSDVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CHLVU (Elongation factor Tu, chloroplastic OS=Chlorella vulgaris GN=tufA PE=3 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.239e-72 Identity = 129/179 (72.07%), Postives = 157/179 (87.71%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SITGRGTVATGRVERG +K+G+TV+LVGL++T+ TVTG+EMFQKTLDE++AGDNVG+LLRGVQK DI+RGMVLAKPG+I PHTKF A VYVL KEEGGRH+PFF GYRPQF +RT DVTG++ D + ++MVMPGDR+KM+VELI P+A E+GMRFAIREGG+TVGAGV+ +I+ Sbjct: 230 SITGRGTVATGRVERGCVKIGDTVELVGLRDTKTTTVTGLEMFQKTLDESVAGDNVGILLRGVQKIDIERGMVLAKPGSILPHTKFEAQVYVLNKEEGGRHTPFFPGYRPQFYVRTTDVTGKIESFRADDNTATQMVMPGDRIKMIVELIQPIAIEKGMRFAIREGGRTVGAGVVSTIV 408
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_OLTVI (Elongation factor Tu, chloroplastic OS=Oltmannsiellopsis viridis GN=tufA PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.924e-72 Identity = 132/179 (73.74%), Postives = 156/179 (87.15%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SITGRGTVATGRVERG +K+G+TV+LVGLK+T TVTG+EMFQKTLDE++AGDNVG+LLRGVQK +IQRGMVLAKPG+I+PHTKF A VYVL KEEGGRH+PFF GYRPQF +RT DVTG++ + D S+MVMPGDRVKM+VELI P+A E+GMRFAIREGG+TVGAGV+ I+ Sbjct: 231 SITGRGTVATGRVERGVVKIGDTVELVGLKDTTETTVTGLEMFQKTLDESVAGDNVGILLRGVQKENIQRGMVLAKPGSISPHTKFEAQVYVLTKEEGGRHTPFFPGYRPQFYVRTTDVTGKIESFVADDGSASQMVMPGDRVKMLVELINPIAVEKGMRFAIREGGRTVGAGVVSEIL 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CYAME (Elongation factor Tu, chloroplastic OS=Cyanidioschyzon merolae GN=tufA PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.924e-72 Identity = 132/180 (73.33%), Postives = 153/180 (85.00%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KVGET+++VGLK T+ TVTG+EMFQKTLDE +AGDNVG+LLRGVQK DI+RGMVLAKPG+ITPHTKF A VYVL KEEGGRH+PFF GYRPQF +RT DVTG + D +++MVMPGDR+KM V LI PVA EQGMRFAIREGG+TVGAGV+ I+E Sbjct: 231 SITGRGTVATGRIERGRVKVGETIEIVGLKNTKTTTVTGLEMFQKTLDEGIAGDNVGVLLRGVQKTDIERGMVLAKPGSITPHTKFEAEVYVLTKEEGGRHTPFFPGYRPQFYVRTTDVTGTIEDFTADDGSKAEMVMPGDRIKMCVNLIYPVAIEQGMRFAIREGGRTVGAGVVTKILE 410
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_TRIEI (Elongation factor Tu OS=Trichodesmium erythraeum (strain IMS101) GN=tuf PE=3 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 3.819e-72 Identity = 134/180 (74.44%), Postives = 152/180 (84.44%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG IKVGETV+LVG+K+TRN TVTGVEMFQK LDE MAGDNVGLLLRG+QK DIQRGMVLAK G+ITPH KF + VYVLKKEEGGRH+PFF YRPQF +RT DVTG + D ++MVMPGDR+KM V+LI PVA EQGMRFAIREGG+T+GAGV+ I+E Sbjct: 230 SITGRGTVATGRIERGKIKVGETVELVGIKDTRNSTVTGVEMFQKILDEGMAGDNVGLLLRGMQKDDIQRGMVLAKSGSITPHKKFESEVYVLKKEEGGRHTPFFPNYRPQFYIRTTDVTGAIESFTADDGSVAEMVMPGDRIKMTVQLINPVAIEQGMRFAIREGGRTIGAGVVSKIVE 409 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |