CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU1_CAUSK (Elongation factor Tu 1 OS=Caulobacter sp. (strain K31) GN=tuf1 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 108/180 (60.00%), Postives = 139/180 (77.22%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+E+G +KVGE V++VG++ + T TGVEMF+K LD+ AGDNVG+LLRG ++ D++RG VL KPG+ITPHTKF+A Y+L KEEGGRH+PFF YRPQF RT DVTG + E +M+MPGD ++ VELI P+A +QG+RFAIREGG+TVGAGV+ I+E Sbjct: 222 SISGRGTVVTGRIEKGVVKVGEEVEIVGIRAVQKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLCKPGSITPHTKFVAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIIKL-----REGVEMIMPGDNAELDVELITPIAMDQGLRFAIREGGRTVGAGVVAKIVE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SHEB8 (Elongation factor Tu OS=Shewanella baltica (strain OS185) GN=tuf1 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.174e-59 Identity = 112/179 (62.57%), Postives = 139/179 (77.65%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG +KVG+ V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD +KMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 220 SISGRGTVVTGRVERGIVKVGDEVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PSYA2 (Elongation factor Tu OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.174e-59 Identity = 110/178 (61.80%), Postives = 141/178 (79.21%), Query Frame = -3 Query: 165 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 698 SI+GRGTV TGRVE G ++VGE +++VG+++T+ T TGVEMF+K LDE AG+N G+LLRG ++ D+QRG VLAKPG+ITPHTKF A VYVL KEEGGRH+PF GYRPQF RT DVTG + + ++MVMPGD V+M VELI P+A ++G+RFAIREGG+TVGAGV+ ++ Sbjct: 222 SISGRGTVVTGRVESGIVRVGEEIEIVGIRDTQKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKREDVQRGQVLAKPGSITPHTKFDAEVYVLSKEEGGRHTPFLNGYRPQFYFRTTDVTGAIQL-----QDGTEMVMPGDNVEMGVELIHPIAMDKGLRFAIREGGRTVGAGVVANV 394
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_GYMST (Elongation factor Tu, chloroplastic (Fragment) OS=Gymnochlora stellata GN=tufA PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.174e-59 Identity = 111/159 (69.81%), Postives = 137/159 (86.16%), Query Frame = -3 Query: 225 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDE-ESKMVMPGDRVKMVVELIMPVACEQG 698 SITGRGTVATGRVERG IK+G+TV++VGLKETR+ TVTG++MFQK L E++AGDNVG+LLRG+QK DIQRGMV+A+PG+ITPH F A VYVL KEEGGRH+PF +GYRPQF +RT DVTG+V + +D+D+ E KMV+PGDRV M VEL+ P+A E+G Sbjct: 205 SITGRGTVATGRVERGGIKIGDTVEIVGLKETRSTTVTGLKMFQKMLQESIAGDNVGMLLRGIQKTDIQRGMVIAQPGSITPHVSFEAQVYVLTKEEGGRHTPFLSGYRPQFYVRTTDVTGKVESLKSDEDKSEMKMVVPGDRVTMSVELVQPIAIEKG 363
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_DESAD (Elongation factor Tu OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=tuf PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.174e-59 Identity = 111/180 (61.67%), Postives = 140/180 (77.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG IKVGE V++VG+++T T TGVEMF+K LD+ AGDNVG+LLRG ++ +++RG VL+ PG+I PHTKF A VYVL K+EGGRH+PFF+GYRPQF RT D+TG V+ DE +MVMPGD VE+I P+A + G+RFAIREGG+TVGAGV+ I+E Sbjct: 223 SISGRGTVVTGRVERGVIKVGEEVEIVGIRDTAKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKRDEVERGQVLSAPGSINPHTKFKAEVYVLSKDEGGRHTPFFSGYRPQFYFRTTDITGVVTL-----DEGVEMVMPGDNATFNVEMINPIAMDPGLRFAIREGGRTVGAGVVTEILE 397
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_BORT9 (Elongation factor Tu OS=Borrelia turicatae (strain 91E135) GN=tuf PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.174e-59 Identity = 115/180 (63.89%), Postives = 138/180 (76.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTVATGR+ERG IKVG+ V++VG++ETR TVTGVEMFQK L++ AGDNVGLLLRGV K DI+RG V+A GTITPH KF A +Y L KEEGGRH PFF+GYRPQF RT DVTG VS E +MVMPGD V +VVELI +A ++ + FA+REGG+TV +G I I+E Sbjct: 221 SISGRGTVATGRIERGVIKVGQEVEIVGIRETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVIAAIGTITPHKKFKASIYCLTKEEGGRHKPFFSGYRPQFFFRTTDVTGMVSL------EGKEMVMPGDNVDIVVELISSIAMDKNVEFAVREGGRTVASGRILEILE 394
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_BACSU (Elongation factor Tu OS=Bacillus subtilis GN=tuf PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.174e-59 Identity = 117/181 (64.64%), Postives = 141/181 (77.90%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKE-TRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERG +KVG+ V+++GL+E + TVTGVEMF+K LD A AGDN+G LLRGV + +IQRG VLAKPGTITPH+KF A VYVL KEEGGRH+PFF+ YRPQF RT DVTG + E +MVMPGD +M VELI +A E+G RF+IREGG+TVG+GV+ +I E Sbjct: 221 SITGRGTVATGRVERGQVKVGDEVEIIGLQEENKKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREEIQRGQVLAKPGTITPHSKFKAEVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTGIIHL-----PEGVEMVMPGDNTEMNVELISTIAIEEGTRFSIREGGRTVGSGVVSTITE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_AZOSE (Elongation factor Tu OS=Azoarcus sp. (strain EbN1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.174e-59 Identity = 112/180 (62.22%), Postives = 138/180 (76.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG +KVGE V++VG+K T T TGVEMF+K LD+ AGDNVG+LLRG ++ D++RG VL KPG+I PHT F VYVL KEEGGRH+PFF YRPQF RT DVTG + + E ++MVMPGD V + V+L+ P+A E+G+RFAIREGG+TVGAGV+ IIE Sbjct: 222 SISGRGTVVTGRVERGIVKVGEEVEIVGIKATVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLCKPGSIKPHTHFTGEVYVLSKEEGGRHTPFFNNYRPQFYFRTTDVTGSI-----ELPEGTEMVMPGDNVSITVKLMAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU2_SHEB9 (Elongation factor Tu 2 OS=Shewanella baltica (strain OS195) GN=tuf2 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.174e-59 Identity = 112/179 (62.57%), Postives = 139/179 (77.65%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG +KVG+ V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD +KMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 220 SISGRGTVVTGRVERGIVKVGDEVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU2_SHEB5 (Elongation factor Tu 2 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tuf2 PE=3 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 2.174e-59 Identity = 112/179 (62.57%), Postives = 139/179 (77.65%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG +KVG+ V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD +KMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 220 SISGRGTVVTGRVERGIVKVGDEVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |