CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PSEAK (Elongation factor Tu, chloroplastic OS=Pseudendoclonium akinetum GN=tufA PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.271e-67 Identity = 125/180 (69.44%), Postives = 148/180 (82.22%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATG VERGT+K G TV+++GL++T TVTG+EMFQKTLDE +AGDNVG+LLRGVQK +IQRGMVLA PGTI PHTKF A VY+L KEEGGRH+PFF GYRPQF +RT DVTG++ D E+ M GDR+KMVVELI P+A E GMRFAIREGG+TVGAGV+ +I++ Sbjct: 230 SITGRGTVATGLVERGTLKTGATVEIIGLRDTTTTTVTGLEMFQKTLDETVAGDNVGVLLRGVQKDNIQRGMVLAAPGTIKPHTKFEAQVYILTKEEGGRHTPFFPGYRPQFYVRTTDVTGKIESFTADDGSEALMATSGDRLKMVVELIQPIAVENGMRFAIREGGRTVGAGVVSTILK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PROWI (Elongation factor Tu, plastid OS=Prototheca wickerhamii GN=tufA PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.271e-67 Identity = 124/180 (68.89%), Postives = 150/180 (83.33%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERG +K+G++V++VGL T+ TVTG+EMFQKTLDE++AGDNVG+LLRG+QK +IQRGMVLAKP +ITPHT F A VYVL KEEGGR +PFF+GYRPQF +RT DVTG++ D E KMV+PGDR+KM ELI P+A E+ MRFAIREGGKTVGAGV+ I++ Sbjct: 230 SITGRGTVATGRVERGVVKIGDSVEIVGLGATKITTVTGLEMFQKTLDESIAGDNVGILLRGIQKTEIQRGMVLAKPKSITPHTNFEAQVYVLNKEEGGRDTPFFSGYRPQFYVRTTDVTGKIESFCTDAGEPIKMVLPGDRIKMKAELIQPIAIERNMRFAIREGGKTVGAGVVGKILK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP4 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=tuf PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.271e-67 Identity = 121/180 (67.22%), Postives = 151/180 (83.89%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +K+ +TV++VG++ETR TVTG+EMF+K+LDE MAGDN GLLLRG++K DI+RGMVLAKPG+ITPHT+F VYVL ++EGGR +PFFAGYRPQF +RT DVTG + D ++MVMPGDR+KM VELI P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 230 SITGRGTVATGRIERGKVKINDTVEVVGIRETRTTTVTGIEMFKKSLDEGMAGDNAGLLLRGLKKEDIERGMVLAKPGSITPHTEFEGEVYVLTEKEGGRKTPFFAGYRPQFYVRTTDVTGTIKSFTADDGSNAEMVMPGDRIKMNVELINPIAIEQGMRFAIREGGRTIGAGVVSKIVK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP7 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7424) GN=tuf PE=3 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 2.832e-67 Identity = 126/181 (69.61%), Postives = 150/181 (82.87%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKE-TRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTVATGR+ERG IK GETV++VG+KE T++ TVTGVEMFQKTL+E +AGDNVGLLLRGVQK +I+RGMV+AKPG+I PHT+F VYVL KEEGGRH+PFF YRPQF +RT DVTG + D +MVMPGDR+KM VELI P+A EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 230 SISGRGTVATGRIERGKIKAGETVEIVGIKEKTKSTTVTGVEMFQKTLEEGLAGDNVGLLLRGVQKEEIERGMVIAKPGSIKPHTQFEGEVYVLTKEEGGRHTPFFKNYRPQFYVRTTDVTGTIVDYTADDGSAVEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKIIQ 410
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_ODOSI (Elongation factor Tu, chloroplastic OS=Odontella sinensis GN=tufA PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.310e-67 Identity = 120/180 (66.67%), Postives = 148/180 (82.22%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KVG+TV++VG+ +T+ T+TG+EMFQKTLDE AGDNVG+LLRGV + DI+ GMVL++PGTITPHT F + VYVL K+EGGRH+PFF GYRPQF +RT DVTG ++ D +MVMPGDR+KM ELI PVA E+GMRFAIREGG+T+GAGV+ II+ Sbjct: 230 SITGRGTVATGRIERGVVKVGDTVEIVGVGDTQTTTITGIEMFQKTLDEGFAGDNVGILLRGVTREDIEAGMVLSEPGTITPHTNFESEVYVLTKDEGGRHTPFFTGYRPQFYVRTTDVTGAITQFTADDGSIVEMVMPGDRIKMTAELIYPVAIEEGMRFAIREGGRTIGAGVVSKIIQ 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_NOSP7 (Elongation factor Tu OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=tuf PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.310e-67 Identity = 119/180 (66.11%), Postives = 153/180 (85.00%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 +ITGRGTVATGR+ERG +KVG+TV+L+GLK+TR VTG+EMF+K+L+E +AGDN G+LLRG++K DI+RGMV+AKPG+ITPHT+F VYVL ++EGGR +PFFAGYRPQF +RT DVTG + +D+ +E +MVMPGDR+KM VELI +A EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 230 TITGRGTVATGRIERGKVKVGDTVELIGLKDTRTTAVTGIEMFKKSLEEGLAGDNAGVLLRGLKKEDIERGMVIAKPGSITPHTQFEGEVYVLTEKEGGRKTPFFAGYRPQFYVRTTDVTGTIKAYTSDEGKEVEMVMPGDRIKMTVELINAIAIEQGMRFAIREGGRTIGAGVVSKIIK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_THAPS (Elongation factor Tu, chloroplastic OS=Thalassiosira pseudonana GN=tufA PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.398e-66 Identity = 119/180 (66.11%), Postives = 147/180 (81.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KVG+ V++VG+ +T+ T+TG+EMFQKTL+E AGDNVG+LLRGV + +I+RGMVL+KPGTITPHT F + VYVL KEEGGRH+PFF GYRPQF +RT DVTG + D +MVMPGDR+KM ELI PVA E+GMRFAIREGG+T+GAGV+ I++ Sbjct: 230 SITGRGTVATGRIERGVVKVGDNVEIVGVGDTQTTTITGIEMFQKTLEEGFAGDNVGILLRGVTRENIERGMVLSKPGTITPHTNFESEVYVLTKEEGGRHTPFFTGYRPQFYVRTTDVTGSIEQFTADDGTIVEMVMPGDRIKMTAELIYPVAIEEGMRFAIREGGRTIGAGVVSKIVK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PHATR (Elongation factor Tu, chloroplastic OS=Phaeodactylum tricornutum GN=tufA PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.398e-66 Identity = 119/180 (66.11%), Postives = 146/180 (81.11%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KVGE V++VG+ +T+ T+TG+EMFQKTL+E AGDNVG+LLRGV + +I+RGMVLAKPGTITPHT F + VYVL K+EGGRH+PFF GYRPQF +RT DVTG ++ D +MVMPGDR+KM E I PVA E GMRFAIREGG+T+GAGV+ I++ Sbjct: 230 SITGRGTVATGRIERGVVKVGENVEIVGVTDTQTTTITGIEMFQKTLEEGFAGDNVGILLRGVTRENIERGMVLAKPGTITPHTSFESEVYVLTKDEGGRHTPFFTGYRPQFYVRTTDVTGSITQFTADDGSVVEMVMPGDRIKMTAEFIYPVAIEAGMRFAIREGGRTIGAGVVSKIVK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_MESVI (Elongation factor Tu, chloroplastic OS=Mesostigma viride GN=tufA PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.398e-66 Identity = 123/181 (67.96%), Postives = 149/181 (82.32%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERG + VGE VD+VGL +N TVTG+EMFQKTL+E++AGDNVG+LLRG+QK ++RGMVLAKP TI PH +F + VYVL KEEGGRH+PFF GYRPQF +RT DVTG++ D +++MVMPGDRVKMVV LI P+A E+GMRFAIREGG+TVGAG++ I+E Sbjct: 230 SITGRGTVATGRVERGKVVVGENVDIVGLANIPQNTTVTGLEMFQKTLEESVAGDNVGVLLRGIQKDQVERGMVLAKPNTIKPHIRFESEVYVLAKEEGGRHTPFFPGYRPQFYVRTTDVTGKIDSFKADDGSDTQMVMPGDRVKMVVSLIQPIAIEKGMRFAIREGGRTVGAGIVSEILE 410
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CHLRE (Elongation factor Tu, chloroplastic OS=Chlamydomonas reinhardtii GN=tufA PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.931e-64 Identity = 121/189 (64.02%), Postives = 150/189 (79.37%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMN---------DKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERG +++ + V++VGL+ T+ VTG+EMF+KTLDE +AGDNVG+LLRGVQK DI+RGMV+AKPGTITPHTKF A VYVL KEEGGRHS F GY+PQF +RT DVTG+V + ++ +KM MPGDR+ M VELI P+A E+GMRFAIREGG+TVGAGV+ +I++ Sbjct: 230 SITGRGTVATGRVERGALRISDNVEIVGLRPTQTAVVTGLEMFKKTLDETLAGDNVGVLLRGVQKKDIERGMVIAKPGTITPHTKFEAQVYVLTKEEGGRHSAFMIGYQPQFYVRTTDVTGKVVGFNHIQMRNPSSVAEEHSNKMAMPGDRISMTVELINPIAIEKGMRFAIREGGRTVGAGVVTNIVQ 418 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |