CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMF (Elongation factor Tu OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=tuf1 PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 8.528e-64 Identity = 120/179 (67.04%), Postives = 144/179 (80.45%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG I VG+ +++VGLKET+ T TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQF RT DVTG V+ +E +MVMPG+ V + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 220 SISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTL-----EEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMB (Elongation factor Tu OS=Neisseria meningitidis serogroup B GN=tufA PE=1 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 8.528e-64 Identity = 120/179 (67.04%), Postives = 144/179 (80.45%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG I VG+ +++VGLKET+ T TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQF RT DVTG V+ +E +MVMPG+ V + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 220 SISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTL-----EEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMA (Elongation factor Tu OS=Neisseria meningitidis serogroup A GN=tufA PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 8.528e-64 Identity = 120/179 (67.04%), Postives = 144/179 (80.45%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG I VG+ +++VGLKET+ T TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQF RT DVTG V+ +E +MVMPG+ V + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 220 SISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTL-----EEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU2_THETN (Elongation factor Tu-B OS=Thermoanaerobacter tengcongensis GN=tufB PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.455e-63 Identity = 122/181 (67.40%), Postives = 146/181 (80.66%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERG +KVG+ V+++GL E+R VTGVEMF+KTLDEA AGDN+G+LLRG+QK +++RG VLAKPGTI PHTKF A VYVL KEEGGRH+PFF GYRPQF RT DVTG + E +MVMPGD V + VELI P+A E+G++FAIREGG+TVGAGV+ +IIE Sbjct: 225 SITGRGTVATGRVERGKVKVGDEVEIIGLTTESRKTVVTGVEMFRKTLDEAQAGDNIGVLLRGIQKDEVERGQVLAKPGTIKPHTKFEAQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGTIQL-----PEGVEMVMPGDHVTLRVELITPIAMEEGLKFAIREGGRTVGAGVVSAIIE 400
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CODFR (Elongation factor Tu, chloroplastic OS=Codium fragile GN=tufA PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.900e-63 Identity = 120/181 (66.30%), Postives = 147/181 (81.22%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDE-ESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERG I+VG+TV+LVGLK T+ +TG+EMF KTL++++AGDNVG+LLR +QK +IQRGMVLAKP +I PH F A VY+LKKEEGGRH+ FFAGYRPQF +RT DVTG + D + +MVMPGDR++M VELI P+A E MRFAIREGGKTVGAGV+ +I++ Sbjct: 229 SITGRGTVATGRVERGMIEVGQTVELVGLKNTKEAIITGLEMFHKTLEKSVAGDNVGILLRRIQKEEIQRGMVLAKPSSILPHQHFKAQVYILKKEEGGRHTSFFAGYRPQFYVRTTDVTGHIKTFQGKIDNTQIQMVMPGDRIQMEVELIRPIAIETRMRFAIREGGKTVGAGVVTTIVQ 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_NEIG1 (Elongation factor Tu OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=tuf1 PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.481e-63 Identity = 119/179 (66.48%), Postives = 144/179 (80.45%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG I VG+ +++VGLKET+ T TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQF RT DVTG V+ ++ +MVMPG+ V + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 220 SISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTL-----EKGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SORC5 (Elongation factor Tu OS=Sorangium cellulosum (strain So ce56) GN=tuf1 PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.241e-63 Identity = 120/179 (67.04%), Postives = 140/179 (78.21%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI GRGTVATGR+ERG IKVG+ V ++G K+T+ VTGVEMF+K LD+ AGDNVG LLRGV+K +I+RG VLAKPG+ITPHTKF VYVLKKEEGGRH+PFF YRPQF +RT DVTG V+ E KMVMPGD + M +ELI PVA E+ MRFAIREGGKTVGAGV+ I+ Sbjct: 222 SIKGRGTVATGRIERGVIKVGDEVQIIGFKDTKKSVVTGVEMFRKLLDQGQAGDNVGCLLRGVEKEEIERGQVLAKPGSITPHTKFTGEVYVLKKEEGGRHTPFFTNYRPQFYIRTTDVTGTVNL-----PEGVKMVMPGDNITMTIELIAPVALEEQMRFAIREGGKTVGAGVVTKIL 395
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_GEOSL (Elongation factor Tu OS=Geobacter sulfurreducens GN=tuf1 PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.241e-63 Identity = 120/180 (66.67%), Postives = 143/180 (79.44%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTVATGRVERG +KVGE V++VG+K T TVTGVEMF+K LDE AGDN+G LLRGV++ DI+RG VLAKPG+ITPHTKF A Y+L KEEGGRH+PFF GYRPQF RT DVTG V D ++MVMPGD V + + LI P+A ++G+RFAIREGG+TVGAGV+ SIIE Sbjct: 222 SISGRGTVATGRVERGIVKVGEEVEIVGIKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLAKPGSITPHTKFKAEAYILTKEEGGRHTPFFNGYRPQFYFRTTDVTGVV-----DLPAGTEMVMPGDNVAVTINLITPIAMDEGLRFAIREGGRTVGAGVVSSIIE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_ALKOO (Elongation factor Tu OS=Alkaliphilus oremlandii (strain OhILAs) GN=tuf1 PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.241e-63 Identity = 124/181 (68.51%), Postives = 144/181 (79.56%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKE-TRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERG IKV + V+LVGL+E +R VTGVEMF+K LD+A AGDNVGLLLRG+Q+ +IQRG VL KPGTI PHTKF A VYVLKKEEGGRH+PFF GYRPQF RT DVTG + +MVMPGD V M ++LI P+A E+G+RFAIREGG+TVG+GV+ SIIE Sbjct: 222 SITGRGTVATGRVERGIIKVQDEVELVGLQEDSRKIVVTGVEMFRKLLDQAQAGDNVGLLLRGIQRTEIQRGQVLCKPGTIKPHTKFKAEVYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGATKL-----PDGMEMVMPGDNVTMEIDLIHPIAIEEGLRFAIREGGRTVGSGVVASIIE 397
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_GEOUR (Elongation factor Tu OS=Geobacter uraniireducens (strain Rf4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.233e-63 Identity = 120/180 (66.67%), Postives = 142/180 (78.89%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTVATGRVERG +KVGE V++VG+K T TVTGVEMF+K LDE AGDN+G LLRGV++ DI+RG VLAKPG+ITPHTKF A Y+L KEEGGRH+PFF GYRPQF RT DVTG V ++MVMPGD V + V LI P+A ++G+RFAIREGG+TVGAGV+ SIIE Sbjct: 222 SISGRGTVATGRVERGIVKVGEEVEIVGMKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLAKPGSITPHTKFKAEAYILTKEEGGRHTPFFNGYRPQFYFRTTDVTGIVELAAG-----TEMVMPGDNVAVTVNLITPIAMDEGLRFAIREGGRTVGAGVVSSIIE 396 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |