CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_GEOMG (Elongation factor Tu OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=tuf1 PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.233e-63 Identity = 120/180 (66.67%), Postives = 143/180 (79.44%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTVATGRVERG +KVGE V++VG+K T TVTGVEMF+K LDE AGDN+G LLRGV++ DI+RG VLA+PG+ITPHTKF A Y+L KEEGGRH+PFF GYRPQF RT DVTG V D ++MVMPGD V + V LI P+A ++G+RFAIREGG+TVGAGV+ SIIE Sbjct: 222 SISGRGTVATGRVERGVVKVGEEVEIVGIKTTTKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLARPGSITPHTKFKAEAYILTKEEGGRHTPFFNGYRPQFYFRTTDVTGIV-----DLPAGTEMVMPGDNVAVTVNLITPIAMDEGLRFAIREGGRTVGAGVVSSIIE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CYCME (Elongation factor Tu, chloroplastic OS=Cyclotella meneghiniana GN=tufA PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.233e-63 Identity = 116/180 (64.44%), Postives = 142/180 (78.89%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG IKV + V++VG+ +T+ T+TG+EMFQKTL+E AGDNVG+LLRGV + +I+RGMVLAKPGTITPHT F + VYVL KEEGGRH+PFF GY P F + T DVTG + D +MVMPGDR+KM ELI PVA E+GMRF IREGG+T+GAGV+ I++ Sbjct: 230 SITGRGTVATGRIERGVIKVVDNVEIVGIGDTKTTTITGIEMFQKTLEEGFAGDNVGILLRGVTRENIERGMVLAKPGTITPHTNFESEVYVLTKEEGGRHTPFFTGYSPIFYVITTDVTGSIDQFTADDGSIVEMVMPGDRIKMTAELIYPVAIEEGMRFVIREGGRTIGAGVVSKIVK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CHAVU (Elongation factor Tu, chloroplastic OS=Chara vulgaris GN=tufA PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.233e-63 Identity = 113/181 (62.43%), Postives = 150/181 (82.87%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI GRGTVATGR+ERG +K+G+ V+L+GL E R+ VTG+EMF++ L++ AG+N+G+LLRG++K DI+RGMV+A+PGTI PHT+F A VY+L+KEEGGRHSPFFAGYRPQF +RT DVTG + D ++++MVMPGDRVKM+V LI P+A E+ MRFAIREGG+T+GAGV+ I++ Sbjct: 230 SIQGRGTVATGRIERGILKLGDIVELIGLNEKIRSTVVTGLEMFRRLLEQGFAGENIGVLLRGIEKKDIERGMVIAQPGTIEPHTRFEAQVYILRKEEGGRHSPFFAGYRPQFFVRTADVTGVIEAFEYDNGDKTRMVMPGDRVKMIVNLICPIAIEKKMRFAIREGGRTIGAGVVLQILD 410
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PELPD (Elongation factor Tu OS=Pelobacter propionicus (strain DSM 2379) GN=tuf1 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.220e-63 Identity = 119/180 (66.11%), Postives = 143/180 (79.44%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTVATGRVERG +KVGE V++VG+K T TVTGVEMF+K LDE AGDN+G LLRG+++ +I+RG VLAKPG+ITPHTKF A Y+L KEEGGRH+PFF GYRPQF RT DVTG V D ++MVMPGD V + V LI P+A ++G+RFAIREGG+TVGAGV+ SIIE Sbjct: 222 SISGRGTVATGRVERGIVKVGEEVEIVGIKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGIKREEIERGQVLAKPGSITPHTKFKAEAYILNKEEGGRHTPFFNGYRPQFYFRTTDVTGIV-----DLPAGTEMVMPGDNVAVTVNLITPIAMDEGLRFAIREGGRTVGAGVVSSIIE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CHRVO (Elongation factor Tu OS=Chromobacterium violaceum GN=tuf1 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.220e-63 Identity = 119/179 (66.48%), Postives = 143/179 (79.89%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG +KVGE +++VGLK+T T TGVEMF+K LD+ AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL K+EGGRH+PFFA YRPQF RT DVTG +S E +MVMPGD V++ VELI P+A E+G+RFAIREGG+TVGAGV+ II Sbjct: 222 SISGRGTVVTGRVERGIVKVGEELEIVGLKDTVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFEASVYVLSKDEGGRHTPFFANYRPQFYFRTTDVTGAISLA-----EGVEMVMPGDNVEIKVELIAPIAMEEGLRFAIREGGRTVGAGVVAKII 395
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU1_THETN (Elongation factor Tu-A OS=Thermoanaerobacter tengcongensis GN=tufA PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.220e-63 Identity = 120/181 (66.30%), Postives = 146/181 (80.66%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 +ITGRGTVATGRVERG +KVG+ V+++GL E+R VTGVEMF+KTLDEA AGDN+G+LLRG+Q+ +++RG VLAKPGTI PHTKF A VYVL KEEGGRH+PFF GYRPQF RT DVTG + E +MVMPGD V + VELI P+A E+G++FAIREGG+TVGAGV+ +IIE Sbjct: 225 TITGRGTVATGRVERGKVKVGDEVEIIGLTTESRKTVVTGVEMFRKTLDEAQAGDNIGVLLRGIQRDEVERGQVLAKPGTIKPHTKFEAQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGTIQL-----PEGVEMVMPGDHVTLRVELITPIAMEEGLKFAIREGGRTVGAGVVSAIIE 400
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_NITSB (Elongation factor Tu OS=Nitratiruptor sp. (strain SB155-2) GN=tuf PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.231e-62 Identity = 116/180 (64.44%), Postives = 145/180 (80.56%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+ERG +KVG+ +++VGL+ T+ TVTGVEMF+K LD+ AGDNVG+LLRG +K +++RG VLA+PGTITPHTKF A +YVL KEEGGRH+PFF+GYRPQF +RT DVTG ++ E +MVMPGD VK+ ELI P+A E+G RFAIREGG+TVGAGV+ IIE Sbjct: 225 SISGRGTVVTGRIERGVVKVGDEIEIVGLRPTQKTTVTGVEMFRKELDQGEAGDNVGVLLRGTKKEEVERGQVLAQPGTITPHTKFEAEIYVLTKEEGGRHTPFFSGYRPQFYVRTTDVTGTITL-----PEGVEMVMPGDNVKINAELIAPIALEEGTRFAIREGGRTVGAGVVSKIIE 399
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_HERAU (Elongation factor Tu OS=Herpetosiphon aurantiacus GN=tuf PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.608e-62 Identity = 116/180 (64.44%), Postives = 144/180 (80.00%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGL-KETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI GRGTV TGR+ERG +KVG+T++++G+ + R VTGVEMF+K LDE AGDNVG LLRG+++ D++RG VLAKPG+I PHTKF A VYVLKKEEGGRHSPFF+GYRPQF +RT DVTG + E +MVMPGD ++M VELI+PVA EQG++FAIREGG+TVGAG++ II Sbjct: 225 SIKGRGTVVTGRIERGIVKVGDTIEIIGMGPDVRTTAVTGVEMFKKLLDEGRAGDNVGALLRGIERTDVERGQVLAKPGSIKPHTKFKAEVYVLKKEEGGRHSPFFSGYRPQFYVRTTDVTGAIGL-----PEGVEMVMPGDNIQMTVELIVPVAIEQGLKFAIREGGRTVGAGIVPEII 399
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_AERS4 (Elongation factor Tu OS=Aeromonas salmonicida (strain A449) GN=tuf1 PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.608e-62 Identity = 117/179 (65.36%), Postives = 143/179 (79.89%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI GRGTV TGRVERG +KVGETV++VG+K+T + T TGVEMF+K LDE AG+N+G LLRGV++ D++RG VLAKPG+I PHTKF + VYVL KEEGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ S+I Sbjct: 220 SIAGRGTVVTGRVERGIVKVGETVEIVGIKDTVSTTCTGVEMFRKLLDEGRAGENIGALLRGVKREDVERGQVLAKPGSIKPHTKFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIAPIAMDDGLRFAIREGGRTVGAGVVASVI 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PELPB (Elongation factor Tu OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=tuf PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.101e-62 Identity = 117/180 (65.00%), Postives = 142/180 (78.89%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+ERG IK+ E V++VGL+ TR VTG+EMFQK LDE AGDN GLLLRGV K +++RGMV+AKPGTI PHTKF A VY+LKKEEGGRH+PFF GYRPQF RT DVTG V+ E +MVMPGD + + VEL+ P+A ++G+RFAIREGG+TVGAG + +IIE Sbjct: 219 SISGRGTVGTGRIERGRIKINEEVEIVGLRPTRKSVVTGIEMFQKLLDEGQAGDNAGLLLRGVDKTELERGMVIAKPGTIKPHTKFKAEVYILKKEEGGRHTPFFNGYRPQFYFRTTDVTGSVTL-----PEGVEMVMPGDNLGVEVELLAPIAMDEGLRFAIREGGRTVGAGSVTTIIE 393 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |