CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_MOOTA (Elongation factor Tu OS=Moorella thermoacetica (strain ATCC 39073) GN=tuf PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.101e-62 Identity = 119/181 (65.75%), Postives = 145/181 (80.11%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 +ITGRGTV TGRVERG +KVG+ V+++GL+ E R VTGVEMF+K LDEA+AGDN+G LLRGV + +++RGMVLAKPG+I PHTKF A VYVL KEEGGRH+PFF GYRPQF RT DVTG V+ E +MVMPGD ++M +ELI P+A E+G+RFAIREGG+TVGAGV+ IIE Sbjct: 225 TITGRGTVTTGRVERGKVKVGDEVEIIGLRDEIRKTVVTGVEMFRKILDEAVAGDNIGTLLRGVDRKEVERGMVLAKPGSIKPHTKFNAEVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGVVNL-----PEGVEMVMPGDNIRMTIELITPIAIEEGLRFAIREGGRTVGAGVVTGIIE 400
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CHACO (Elongation factor Tu, chloroplastic OS=Chara connivens GN=tufA PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.101e-62 Identity = 112/176 (63.64%), Postives = 147/176 (83.52%), Query Frame = -3 Query: 174 SITGRGTVATGRVERGTIKVGETVDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVI 698 SI GRGTVATGR+ERG +K+G+ V+L+GL E R+ VTG+EMF++ L++ AG+N+G+LLRG++K DI+RGMV+A+PGTI PHT+F A VY+L+KEEGGRHSPFFAGYRPQF +RT DVTG + D ++++MVMPGDRVKM+V LI P+A E+ MRFAIREGG+T+GAGV+ Sbjct: 230 SIQGRGTVATGRIERGILKLGDIVELIGLNEKIRSTVVTGLEMFRRLLEQGFAGENIGVLLRGIEKKDIERGMVIAQPGTIEPHTRFEAQVYILRKEEGGRHSPFFAGYRPQFFVRTADVTGVIEAFEYDNGDKTRMVMPGDRVKMIVNLICPIAIEKKMRFAIREGGRTIGAGVV 405
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CAMHC (Elongation factor Tu OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=tuf PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.101e-62 Identity = 119/179 (66.48%), Postives = 142/179 (79.33%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVE+G +KVG+TV+LVG+K T+ TVTGVEMF+K LDE AGDNVG+LLRG K D++RGMVLAKP +ITPHTKF A VY+L KEEGGRH+PFF YRPQF +RT DVTG + E ++MVMPGD VK+ VELI P+A EQG RFAIREGG TVG+GV+ I+ Sbjct: 225 SISGRGTVVTGRVEKGIVKVGDTVELVGIKPTQTTTVTGVEMFRKELDEGEAGDNVGVLLRGTAKEDVERGMVLAKPKSITPHTKFEAEVYILTKEEGGRHTPFFNNYRPQFYVRTTDVTGSIQL-----PEGTEMVMPGDNVKITVELIHPIALEQGTRFAIREGGHTVGSGVVSKIL 398
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_ARCB4 (Elongation factor Tu OS=Arcobacter butzleri (strain RM4018) GN=tuf PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.101e-62 Identity = 113/179 (63.13%), Postives = 143/179 (79.89%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGR+E+GTIKVGE +++VG +TR TVTGVEMF+K +D+ AGDN G+LLRG++K D++RG VL KPGTITPHTKF VY+L KEEGGRH+PFF+GYRPQF +RT DVTG + E ++MVMPGD V+M VEL+ P+A ++G +FAIREGG+TVGAGV+ II Sbjct: 228 SISGRGTVVTGRIEKGTIKVGEEIEIVGFGDTRKTTVTGVEMFRKEMDQGQAGDNCGILLRGIKKEDVERGQVLVKPGTITPHTKFRCEVYILSKEEGGRHTPFFSGYRPQFYVRTTDVTGSCTL-----PEGTEMVMPGDNVEMTVELVAPIALDKGTKFAIREGGRTVGAGVVAEII 401
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_STAHJ (Elongation factor Tu OS=Staphylococcus haemolyticus (strain JCSC1435) GN=tuf PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.743e-62 Identity = 120/180 (66.67%), Postives = 141/180 (78.33%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERG IKVGE V+++G+ +T TVTGVEMF+K LD A AGDN+G LLRGV + D+QRG VLA PG+ITPHTKF A VYVL K+EGGRH+PFF YRPQF RT DVTG V+ E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+ IIE Sbjct: 220 SITGRGTVATGRVERGQIKVGEEVEIIGIHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTKFKADVYVLSKDEGGRHTPFFTNYRPQFYFRTTDVTGVVNL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIE 394
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PROA2 (Elongation factor Tu OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tuf PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.743e-62 Identity = 115/180 (63.89%), Postives = 141/180 (78.33%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+E G IK+GE V++VG+K TR VTG+EMFQKTLD+ AGDN G+L RGV K +++RGMV+AKPGTITPHTKF A VY+LKKEEGGRH+PFF YRPQF RT DVTG V+ E +MVMPGD + + VELI+P+A ++ +RFAIREGG+TVGAG + IIE Sbjct: 219 SISGRGTVGTGRIESGVIKIGEEVEIVGIKPTRKSVVTGIEMFQKTLDQGQAGDNAGILFRGVDKEELERGMVIAKPGTITPHTKFKAEVYILKKEEGGRHTPFFNNYRPQFYFRTTDVTGAVTL-----PEGVEMVMPGDNLSVEVELIVPIAMDENLRFAIREGGRTVGAGTVTQIIE 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_DICNV (Elongation factor Tu OS=Dichelobacter nodosus (strain VCS1703A) GN=tuf PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.743e-62 Identity = 116/180 (64.44%), Postives = 143/180 (79.44%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG +KVG+ +++VGL++T T TGVEMF+K LD+ AGDNVG+LLRG ++ +++RG VLAKPGTITPHTKF + VYVL KEEGGRH+PFF GYRPQF RT DVTG E +MVMPGD VKM+V+LI P+A ++G+RFAIREGG+TVGAGV+ IIE Sbjct: 222 SISGRGTVVTGRVERGVVKVGDELEIVGLRDTAKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREEVERGQVLAKPGTITPHTKFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGECVL-----PEGVEMVMPGDNVKMIVQLIHPIAMDEGLRFAIREGGRTVGAGVVAKIIE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CHLTE (Elongation factor Tu OS=Chlorobium tepidum GN=tuf PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.743e-62 Identity = 118/180 (65.56%), Postives = 141/180 (78.33%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+ERG IKVG+ V++VG+K T VTG+EMFQKTLDE AGDN GLLLRGV K ++RGMV+AKPG+ITPHTKF A VY+LKKEEGGRH+PFF GYRPQF RT DVTG V+ E +MVMPGD + + VELI P+A E+ +RFAIREGG+TVGAG + I+E Sbjct: 219 SISGRGTVGTGRIERGRIKVGDEVEIVGIKPTAKSVVTGIEMFQKTLDEGQAGDNAGLLLRGVDKNALERGMVIAKPGSITPHTKFKAEVYILKKEEGGRHTPFFNGYRPQFYFRTTDVTGSVTL-----PEGVEMVMPGDNLSIDVELIAPIAMEESLRFAIREGGRTVGAGSVTKIVE 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CHLL2 (Elongation factor Tu OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=tuf PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.743e-62 Identity = 116/180 (64.44%), Postives = 142/180 (78.89%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+ERG IK+ E V++VG+K TR VTG+EMFQK LDE AGDN GLLLRGV K +++RGMV+AKPG+I PHTKF A VY+L+KEEGGRH+PFF GYRPQF RT DVTG V+ E +MVMPGD + + VELI+P+A ++G+RFAIREGG+TVGAG + IIE Sbjct: 219 SISGRGTVGTGRIERGRIKINEEVEIVGIKPTRKSVVTGIEMFQKLLDEGQAGDNAGLLLRGVDKTELERGMVIAKPGSIKPHTKFKAEVYILRKEEGGRHTPFFNGYRPQFYFRTTDVTGSVTL-----PEGVEMVMPGDNLSVEVELIVPIAMDEGLRFAIREGGRTVGAGSVTKIIE 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU2_ALKMQ (Elongation factor Tu 2 OS=Alkaliphilus metalliredigens (strain QYMF) GN=tuf2 PE=3 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 2.743e-62 Identity = 120/181 (66.30%), Postives = 142/181 (78.45%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KV E + LVGL E R VTGVEMF+K LD+ AGDNVG+LLRG+Q+ +I+RG VLAK G+I PHTKF+A VYVLKKEEGGRH+PFF GYRPQF RT DVTG + E +MVMPGD + M +ELI P+A E+G+RFAIREGG+TVGAGV+ SIIE Sbjct: 222 SITGRGTVATGRIERGIVKVQEEISLVGLSEAPRKLVVTGVEMFRKLLDQGQAGDNVGILLRGIQRDEIERGQVLAKTGSIQPHTKFMAEVYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGSIKL-----PEGVEMVMPGDNITMEIELISPIATEEGLRFAIREGGRTVGAGVVASIIE 397 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |