CB290499

Overview
NameCB290499
Unique NameCB290499
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLC (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=lldD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 77/268 (28.73%), Postives = 127/268 (47.39%), Query Frame = 2 
Query:   47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++ N  D S++WKD++W++     P+++KG+L  EDA  A+++GA
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGA 267
[Close]
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_ECOK1 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O1:K1 / APEC GN=lldD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 77/268 (28.73%), Postives = 127/268 (47.39%), Query Frame = 2 
Query:   47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ + P     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L  EDA  A+++GA
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGA 267
[Close]
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_ECOHS (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O9:H4 (strain HS) GN=lldD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 77/268 (28.73%), Postives = 127/268 (47.39%), Query Frame = 2 
Query:   47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++ N  D S++WKD++W++     P+++KG+L  EDA  A+++GA
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGA 267
[Close]
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_ECODH (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12 / DH10B) GN=lldD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 77/268 (28.73%), Postives = 127/268 (47.39%), Query Frame = 2 
Query:   47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++ N  D S++WKD++W++     P+++KG+L  EDA  A+++GA
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGA 267
[Close]
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_ECOBW (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12 / BW2952) GN=lldD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 77/268 (28.73%), Postives = 127/268 (47.39%), Query Frame = 2 
Query:   47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++ N  D S++WKD++W++     P+++KG+L  EDA  A+++GA
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGA 267
[Close]
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_ECO8A (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O8 (strain IAI1) GN=lldD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 77/268 (28.73%), Postives = 127/268 (47.39%), Query Frame = 2 
Query:   47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++ N  D S++WKD++W++     P+++KG+L  EDA  A+++GA
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGA 267
[Close]
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_ECO5E (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 77/268 (28.73%), Postives = 127/268 (47.39%), Query Frame = 2 
Query:   47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++ N  D S++WKD++W++     P+++KG+L  EDA  A+++GA
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGA 267
[Close]
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_ECO57 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O157:H7 GN=lldD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 77/268 (28.73%), Postives = 127/268 (47.39%), Query Frame = 2 
Query:   47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++ N  D S++WKD++W++     P+++KG+L  EDA  A+++GA
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGA 267
[Close]
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_ECO55 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain 55989 / EAEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 77/268 (28.73%), Postives = 127/268 (47.39%), Query Frame = 2 
Query:   47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++ N  D S++WKD++W++     P+++KG+L  EDA  A+++GA
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGA 267
[Close]
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_ECO45 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 77/268 (28.73%), Postives = 127/268 (47.39%), Query Frame = 2 
Query:   47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ + P     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L  EDA  A+++GA
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGA 267
The following BLAST results are available for this feature:
BLAST of CB290499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_ECOLC1.706e-2628.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOK11.706e-2628.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOHS1.706e-2628.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECODH1.706e-2628.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOBW1.706e-2628.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO8A1.706e-2628.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO5E1.706e-2628.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO571.706e-2628.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO551.706e-2628.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO451.706e-2628.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bh04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bh04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290499 ID=CB290499; Name=CB290499; organism=Citrus sinensis; type=EST; length=780bp
GCCCGAGGGGAAGCCAAGCGATAGCATTATGACTTATATATCCGAGATCA
CCAATGTTATGGAGTATGAGGCTCTTGCAAAGGAGAAATTGCCGAAGATG
GTTTATGACTACTATGCATCAGGTGCTGAGGACCAGTGGACTCTTCAGGA
AAACCGTAATGCATTCTCTAGGATTCTATTTCGACCACGCATTCTTAGAG
ATGTAAGCAAGATTGACATGACTACAACAGTCTTGGGCTTCAACATTTCC
ATGCCCATCATGATTGCTCCAACGGCATTTCAGAAAATGGCTCATCCTGA
AGGGGAGTGTGCAACAGCAAGGGCAGCCTCAGCAGCTGGCACAATCATGA
CATTATCTTCATGGGCCACTTCCAGTGTCGAGGAAGTTTCTTCAACGGGA
CCTGGAATTCGCTTTTTCCAACTCTATGTGACCAAGCACAGGAATGTGGA
CGCACAGCTAGTAAAAAGAGCTGAAAGGGCTGGTTTTAAGGCGATTGCCC
TTACCGTCGATACTCCAAGGCTTGGCCGTCGGGAAGCTGATATTAAGAAC
AGATTTGTTTTGCCGCCACATCTGACTTTGAAGAACTATGAGGGCTTGTA
TATTGGCAAGATGGATAAGACTGATGACTCTGGATTAGCTTCGTATGTTG
CCAACCAAATTGACCGGTCACTGAACTGGAAGGATGTGAAGTGGCTTCAA
ACAATCACCTCACTGCCAATACTCGTGAAGGGTGTTCTTACTGCTGAAGA
TGCAAGTCTAGCAATACAATATGGAGCTGC
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