CB290513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290513 vs. ExPASy Swiss-Prot
Match: NFYB_DICDI (Nuclear transcription factor Y subunit beta OS=Dictyostelium discoideum GN=nfyB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.620e-38 Identity = 83/129 (64.34%), Postives = 103/129 (79.84%), Query Frame = 1 Query: 241 GGS--HESGGEQSPHAG-GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREME--GDTKGSARGGDGSA 612 GGS + SGG + + G REQDRYLPIANI RIMKKALP N K+AKDAK+TVQ+CVSEFISFITSEASDKCQ+EKRKTING+D++ AM +LGFE+Y++PLK YL++YRE E + K S + + S+ Sbjct: 27 GGSSNNNSGGNANNNNNEGDREQDRYLPIANIIRIMKKALPNNAKVAKDAKETVQDCVSEFISFITSEASDKCQQEKRKTINGEDIIAAMVSLGFENYVEPLKVYLLKYRETEKNSNNKRSPKKSESSS 155
BLAST of CB290513 vs. ExPASy Swiss-Prot
Match: NFYB_PETMA (Nuclear transcription factor Y subunit beta OS=Petromyzon marinus GN=NFYB PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.154e-38 Identity = 85/158 (53.80%), Postives = 113/158 (71.52%), Query Frame = 1 Query: 208 SEMAEAPTSPAGGSH-ESGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGDTKGSARGGDGSAKRDTIGALPGQNAQYALQGPL 675 S +A S A G H ES G + P+ REQD YLPIAN++RIMK ++P++GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL +YRE M+G+ G + T A+P + + + GPL Sbjct: 29 SSDGDAEGSLASGDHDESCGSKDPY----REQDIYLPIANVARIMKTSIPSSGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKQYLQKYRESMKGEK------GINATVVTTTDAIPEELTEESFSGPL 176
BLAST of CB290513 vs. ExPASy Swiss-Prot
Match: NFYB5_ARATH (Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana GN=NFYB5 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36 Identity = 76/136 (55.88%), Postives = 95/136 (69.85%), Query Frame = 1 Query: 229 TSPAGGSHESGG-------EQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKG-SARGGDGSA 612 +S + HE G +Q + V+EQDR LPIAN+ RIMK LPAN K++K+AK+T+QECVSEFISF+T EASDKC KEKRKT+NGDD+ WAMA LGF+DY LK YL RYR +EG+ +GG S+ Sbjct: 22 SSSSNHQHEHDGLVVVVEDQQQEESMMVKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGEKPNHHGKGGPKSS 157
BLAST of CB290513 vs. ExPASy Swiss-Prot
Match: NFYB6_ARATH (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana GN=NFYB6 PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.676e-35 Identity = 73/141 (51.77%), Postives = 101/141 (71.63%), Query Frame = 1 Query: 256 SGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGSAKRDTIGALP-GQNAQYALQGPL 675 +GGE+ VREQDR++PIAN+ RIM++ LPA+ KI+ D+K+T+QECVSE+ISFIT EA+++CQ+E+RKTI +D+LWAM+ LGF+DYI+PL YL RYRE+EG+ S G S + P G +Y GP+ Sbjct: 48 NGGEEECT---VREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGERGVSCSAGSVSMTNGLVVKRPNGTMTEYGAYGPV 185
BLAST of CB290513 vs. ExPASy Swiss-Prot
Match: NFYB_CHICK (Nuclear transcription factor Y subunit beta OS=Gallus gallus GN=NFYB PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.189e-35 Identity = 75/121 (61.98%), Postives = 96/121 (79.34%), Query Frame = 1 Query: 292 REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGD--TKGSARGGDGSAKRDTIGALPGQ 645 REQD YLPIAN++RIMK A+P GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE M+G+ G+ GDG ++ T A Q Sbjct: 51 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGTVTTGDGLSEELTEEAFTNQ 171
BLAST of CB290513 vs. ExPASy Swiss-Prot
Match: NFYB_RAT (Nuclear transcription factor Y subunit beta OS=Rattus norvegicus GN=Nfyb PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35 Identity = 82/166 (49.40%), Postives = 111/166 (66.87%), Query Frame = 1 Query: 163 SKLARQIQKLWGFYWSEMAEAPTSPAGGSHE--SGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGD--TKGSARGGDGSAKRDTIGALPGQ 645 S+L + G ++ T + HE +G ++S REQD YLPIAN++RIMK A+P GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE M+G+ G+ DG ++ T A Q Sbjct: 13 SQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKES-----FREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVSATDGLSEELTEEAFTNQ 173
BLAST of CB290513 vs. ExPASy Swiss-Prot
Match: NFYB_MOUSE (Nuclear transcription factor Y subunit beta OS=Mus musculus GN=Nfyb PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35 Identity = 82/166 (49.40%), Postives = 111/166 (66.87%), Query Frame = 1 Query: 163 SKLARQIQKLWGFYWSEMAEAPTSPAGGSHE--SGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGD--TKGSARGGDGSAKRDTIGALPGQ 645 S+L + G ++ T + HE +G ++S REQD YLPIAN++RIMK A+P GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE M+G+ G+ DG ++ T A Q Sbjct: 13 SQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKES-----FREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVSATDGLSEELTEEAFTNQ 173
BLAST of CB290513 vs. ExPASy Swiss-Prot
Match: NFYB_HUMAN (Nuclear transcription factor Y subunit beta OS=Homo sapiens GN=NFYB PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35 Identity = 82/166 (49.40%), Postives = 111/166 (66.87%), Query Frame = 1 Query: 163 SKLARQIQKLWGFYWSEMAEAPTSPAGGSHE--SGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGD--TKGSARGGDGSAKRDTIGALPGQ 645 S+L + G ++ T + HE +G ++S REQD YLPIAN++RIMK A+P GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE M+G+ G+ DG ++ T A Q Sbjct: 13 SQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKES-----FREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVTATDGLSEELTEEAFTNQ 173
BLAST of CB290513 vs. ExPASy Swiss-Prot
Match: NFYB_BOVIN (Nuclear transcription factor Y subunit beta OS=Bos taurus GN=NFYB PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35 Identity = 82/166 (49.40%), Postives = 111/166 (66.87%), Query Frame = 1 Query: 163 SKLARQIQKLWGFYWSEMAEAPTSPAGGSHE--SGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGD--TKGSARGGDGSAKRDTIGALPGQ 645 S+L + G ++ T + HE +G ++S REQD YLPIAN++RIMK A+P GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE M+G+ G+ DG ++ T A Q Sbjct: 13 SQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKES-----FREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVTATDGLSEELTDEAFTNQ 173
BLAST of CB290513 vs. ExPASy Swiss-Prot
Match: NFYB_HORSE (Nuclear transcription factor Y subunit beta OS=Equus caballus GN=NFYB PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.419e-34 Identity = 76/143 (53.15%), Postives = 100/143 (69.93%), Query Frame = 1 Query: 163 SKLARQIQKLWGFYWSEMAEAPTSPAGGSHE--SGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKG 585 S+L + G ++ T + HE +G ++S REQD YLPIAN++RIMK A+P GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE KG Sbjct: 13 SQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKES-----FREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKG 150 The following BLAST results are available for this feature:
BLAST of CB290513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290513 ID=CB290513; Name=CB290513; organism=Citrus sinensis; type=EST; length=697bpback to top |