CB290516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290516 vs. ExPASy Swiss-Prot
Match: ATL2H_ARATH (RING-H2 finger protein ATL2H OS=Arabidopsis thaliana GN=ATL2H PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.176e-15 Identity = 40/79 (50.63%), Postives = 48/79 (60.76%), Query Frame = 2 Query: 332 LDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPG 568 LD +I +FP F YS G ECA+CL+EF D++T+RLI C H FH CID W E H TCPVCR L +PG Sbjct: 78 LDPFIIRSFPVFHYSSATKKNHGT---ECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCRCEL--DPG 151
BLAST of CB290516 vs. ExPASy Swiss-Prot
Match: ATL4G_ARATH (RING-H2 finger protein ATL4G OS=Arabidopsis thaliana GN=ATL4G PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.842e-15 Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 332 LDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVD 613 L+ +I + P F +S V L A+EC+VCL+EF+D+E+ R++P C H FH CID W SH++CP+CRS + G E+ S D Sbjct: 52 LNPSIIKSLPIFTFSAVTALF----AMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEPFAGGVKSSMDEVAISISD 141
BLAST of CB290516 vs. ExPASy Swiss-Prot
Match: ATL3J_ARATH (RING-H2 finger protein ATL3J OS=Arabidopsis thaliana GN=ATL3J PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.842e-15 Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 344 VIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSS 604 V+D+ P F +S V + +CAVCL++FE ++ LRL+P C H FH +CID WL S+ TCP+CRS L + + + +GS+ Sbjct: 93 VLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLAVVGSN 179
BLAST of CB290516 vs. ExPASy Swiss-Prot
Match: ATL1A_ARATH (RING-H2 finger protein ATL1A OS=Arabidopsis thaliana GN=ATL1A PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.842e-15 Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 2 Query: 332 LDREVIDTFPTFVYSEVKTLK----VGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGET 574 LD I P F + + + K + EC+VCLNEF++DE LR+IP C HVFH +CID WL+ + CP+CR++++ E T Sbjct: 102 LDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFT 186
BLAST of CB290516 vs. ExPASy Swiss-Prot
Match: ATL5K_ARATH (RING-H2 finger protein ATL5K OS=Arabidopsis thaliana GN=ATL5K PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.712e-15 Identity = 43/117 (36.75%), Postives = 65/117 (55.56%), Query Frame = 2 Query: 332 LDREVIDTFPTFV----YSEVKTLKVGKG-------ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLA---SEPGETTPQPSELGSSEVDLEAQNDAAV 640 LD VI P F Y + + G+G + EC+VCL+EF+D+E LR+IP C H+FH +CID WL+++ CP+CR+ ++ S P + PS + V L +N+ V Sbjct: 99 LDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLRGENEYVV 215
BLAST of CB290516 vs. ExPASy Swiss-Prot
Match: ATL3G_ARATH (RING-H2 finger protein ATL3G OS=Arabidopsis thaliana GN=ATL3G PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.848e-15 Identity = 41/90 (45.56%), Postives = 51/90 (56.67%), Query Frame = 2 Query: 332 LDREVIDTFPTFVYSEVKTL---KVGKGAL----ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTP 580 LD VI T P F+YS VGK + +CAVCL EFE+ + +R +P C H FH ECID WL SH CP+CR+ + G TP Sbjct: 121 LDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTP 210
BLAST of CB290516 vs. ExPASy Swiss-Prot
Match: ATL3E_ARATH (Putative RING-H2 finger protein ATL3E OS=Arabidopsis thaliana GN=ATL3E PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-14 Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 2 Query: 401 KGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQND 631 K LEC VCL+E D + R++P CDH FH ECID+WL+S++TCP+CR + + T P ELG + +D Sbjct: 83 KYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQSRTRP---ELGGRDKSFNQNHD 156
BLAST of CB290516 vs. ExPASy Swiss-Prot
Match: ATL5N_ARATH (Putative RING-H2 finger protein ATL5N OS=Arabidopsis thaliana GN=ATL5N PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.842e-14 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 332 LDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNL 553 +D+ ID P Y + L+ +CAVCL EF ++ LRL+PKC H FH ECID WL +++TCP+CR NL Sbjct: 96 IDQSFIDALPLLHYKTMIGLR--HDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNL 167
BLAST of CB290516 vs. ExPASy Swiss-Prot
Match: ATL4E_ARATH (RING-H2 finger protein ATL4E OS=Arabidopsis thaliana GN=ATL4E PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.842e-14 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 332 LDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPG-ETTPQPSELGSS 604 L +++ + P +Y E +K +C+VCL +++ +E L+ +P C H FH ECID WL SHTTCP+CR +L +P + + Q +E+ SS Sbjct: 87 LSKDIREMLPVVIYKESFIVKDS----QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSLDLSHQSTEIVSS 174
BLAST of CB290516 vs. ExPASy Swiss-Prot
Match: ATL4H_ARATH (Putative RING-H2 finger protein ATL4H OS=Arabidopsis thaliana GN=ATL4H PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.104e-14 Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 2 Query: 413 ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQP 586 +C++CL EF +DE+LRL+PKC+H FH CID WL+SH+ CP+CR+ + TT QP Sbjct: 180 DCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIV---PTTQQP 234 The following BLAST results are available for this feature:
BLAST of CB290516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290516 ID=CB290516; Name=CB290516; organism=Citrus sinensis; type=EST; length=748bpback to top |