CB290519

Overview
NameCB290519
Unique NameCB290519
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290519 vs. ExPASy Swiss-Prot
Match: CP2BJ_MOUSE (Cytochrome P450 2B19 OS=Mus musculus GN=Cyp2b19 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.016e-11
Identity = 44/164 (26.83%), Postives = 72/164 (43.90%), Query Frame = -1
Query:  294 LFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXEQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFPVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMFHLMLGSLINSF 785
            LF AG +TTS+T+ ++   +L  P          +Q +         D T++PY  AV+ E                 KD    G+ +PK  +V+  + +   D   ++ P +F PE FL +N   K  N   +PF  G+RIC G  +A     L   +++ +F
Sbjct:  296 LFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFTDLAPIGLPHKVTKDTLFRGYLIPKNTEVYPILSSALHDPRYFEQPDSFNPEHFLDANGALK-TNEAFMPFSTGKRICLGEGIARNELFLFFTTILQNF 458          
BLAST of CB290519 vs. ExPASy Swiss-Prot
Match: C513B_DICDI (Probable cytochrome P450 513B1 OS=Dictyostelium discoideum GN=cyp513b1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.016e-11
Identity = 53/198 (26.77%), Postives = 88/198 (44.44%), Query Frame = -1
Query:  234 LFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXE----QTVCKCNPIEESDI--------TRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFPVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMFHLMLGSLINSFDWKLDNHNMDMEDKF--GLTVQ 785
            +  AG+D+TSST  + + E+++NP               Q     + + ES +        + +PYL   +KE                 ++  I G+ + KG  +F N++A  R ++ +  P  FIPER+   N D   Q   LI FG G R C G  LA      ++ S++N +++   N ++  +D    GLT Q
Sbjct:  284 IITAGSDSTSSTALFFLIEMMNNPTIQTKVYNDIVVSFEQNQQADDYMNESMVILKYSKYRSLIPYLSLALKENYRKHPAAPFGAPHETTQETVIEGYTIAKGTMIFQNIYATQRSDTFYSQPDEFIPERW---NGDENSQT--LISFGTGIRDCIGKSLAYNEIFTIIASVLNRYEFINPNPSIPFDDNGIPGLTTQ 476          
The following BLAST results are available for this feature:
BLAST of CB290519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
CP2BJ_MOUSE8.016e-1126.83Cytochrome P450 2B19 OS=Mus musculus GN=Cyp2b19 PE... [more]
C513B_DICDI8.016e-1126.77Probable cytochrome P450 513B1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ca05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ca05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290519 ID=CB290519; Name=CB290519; organism=Citrus sinensis; type=EST; length=797bp
TTTTTTTTTTTTTTTTTCGCATGACTTTATAGTTTATTGAAGATCAACTC
TGTTAAGTTGCGTGTCTACATAAAAAAAAATAAGAGCGCCCACACCTGAG
AATGATTACACACACATATAACTAACCACCAAGCGCTTTATATAGTGGCT
ACCACCAAGCGCTTTATATATTGGCTACAAACTATAGTATAAAACTAGAT
GGCACCAGGGACAGCATGAAGGGGTTGAGCCTTCTGAACGGTGAGGCCAA
ATTTATCTTCCATGTCCATGTTGTGGTTATCAAGCTTCCAATCAAAAGAG
TTAATAAGGGAACCCAACATTAGATGGAACATTCTGATTGCCAATGGTAA
ACCAGGACAAATTCGTCGTCCAGCTCCGAAGGGAATTAGCTCAAAATTCT
GGCCTTTGAAATCAGCATTTGACCCTAAAAACCTTTCGGGAATAAAAGTG
TGAGGGTTGTCCCATGTGCTTTCATCTCTGCCAATAGCCCATACATTGAC
AAAAACTTGTGCACCTTTTGGCACTGGGAAGCCTGCAATTTCAACATCTT
TTGTGGCTTTGCGGGGAAGTAATAAGGGAGCTGCAGGGTGCAATCTCAAA
GTTTCTTTAACAACAGCTTGTAGATAAGGTAGCCGAGTGATGTCAGATTC
CTCAATTGGGTTACACTTGCAAACTGTTTGTTCTAGCTCCAATTTTGCTT
TCAATAAAGCCTCAGGGTTGTGGAGTAGTTCTGCCATTGCCCATTCCATT
GTACTTGAAGTTGTGTCATTCCCCGCAATAAACAAATCCGCCTCGTG
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