CB290520

Overview
NameCB290520
Unique NameCB290520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP2DB_MOUSE (Cytochrome P450 2D11 OS=Mus musculus GN=Cyp2d11 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 56/204 (27.45%), Postives = 86/204 (42.16%), Query Frame = 1
Query:    4 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXD-VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADF-KGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTVQKAQP------LHAVPGA 591
            DLF AG  TTS+T+ WA+  ++ +P             + +    E +D  R+PY  AV+ E                     ++  F V KG+ +  N+ ++ + E+ W+ P  F PE FL +   F K + F  +PF AG R C G  LA   L L    L+                +F ++V   QP      +HA+P A
Sbjct:  304 DLFTAGMVTTSTTLSWALLLMILHPDVQRRVQQEIDAVIGQVQHPEMADQARMPYTNAVIHEVQRFGTLLHCLCHASQVVTFTQVQDFLVTKGSTLIPNLSSVLKGETVWEKPLRFHPEHFLDAQGHFVKPEAF--MPFSAGHRSCLGEALARMELFLFFTCLL---------------QRFSISVPDGQPQPSNYRVHAIPVA 490          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP2G1_RAT (Cytochrome P450 2G1 OS=Rattus norvegicus GN=Cyp2g1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 44/165 (26.67%), Postives = 68/165 (41.21%), Query Frame = 1
Query:    4 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSF 498
            +LF AG +T SST+ +    L+  P           Q +         D  ++PY  AV+ E                  D    G+ +PKG  V+  + ++ +D   +  P  F P+ FL     FK +N   + F +G+RIC G  LA   L L   S++  F
Sbjct:  297 NLFFAGTETVSSTLRYGFLLLMKYPEVEAKIHEEINQVIGTHRTPRVDDRAKMPYTDAVIHEIQRLTDIVPLGVPHNVIRDTHFRGYFLPKGTDVYPLIGSVLKDPKYFRYPEAFYPQHFLDEQGRFK-KNDAFVAFSSGKRICVGEALARMELFLYFTSILQRF 460          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP2F5_GORGO (Cytochrome P450 2F5 OS=Gorilla gorilla gorilla GN=CYP2F5 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 46/165 (27.88%), Postives = 68/165 (41.21%), Query Frame = 1
Query:    4 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSF 498
            +L   G +T  +T+ +A   L+  P             V +       D   +PY  AV+ E                  D    GF +PKG  +   +  +  D S +  P  F PE FL +N  FK ++   +PF AGRR+C G  LA   L L L +++ SF
Sbjct:  294 NLLFGGTETVGTTLRYAFLALMKYPKVQARVQEEIDLVVGRARLPALKDRAAMPYTDAVIHEVQRFADIIPMSLPHRVTRDTAFRGFLIPKGTDIITLLNTVHYDPSQFLTPQEFNPEHFLDANQSFK-KSPAFMPFSAGRRLCLGESLARMELFLYLTAILQSF 457          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP2F2_RAT (Cytochrome P450 2F2 OS=Rattus norvegicus GN=Cyp2f2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 46/165 (27.88%), Postives = 67/165 (40.61%), Query Frame = 1
Query:    4 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSF 498
            +L   G +T  +T+  A   L+  P             V +       D   +PY  AV+ E                  D    GF +PKG  V   +  +  D   +  P  F PE FL +N  FK ++   +PF AGRR+C G PLA   L + L S++ +F
Sbjct:  294 NLLFGGTETVGTTLRHAFLILMKYPKVQARVQEEIDCVVGRSRMPTLEDRASMPYTDAVIHEVQRFADVIPMNLPHRVIRDTPFRGFLIPKGTDVITLLNTVHYDSDQFKTPQEFNPEHFLDANQSFK-KSPAFMPFSAGRRLCLGEPLARMELFIYLTSILQNF 457          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP2E1_MACFA (Cytochrome P450 2E1 (Fragment) OS=Macaca fascicularis GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 44/169 (26.04%), Postives = 73/169 (43.20%), Query Frame = 1
Query:    1 ADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK 507
            ADLF AG +TTS+T+ + +  L+  P           + +         D   +PY+ AVV E                  D    G+ +PKG  +   + ++      + +P  F PE  +  +  FK  ++   PF AG+R+C G  LA   L L+L +++  F+ K
Sbjct:  250 ADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMHAVVHEIQRFITLVPSNLPHEATRDTIFRGYIIPKGTVIVPTLDSVLYHNQEFPDPEKFKPEHLVDESGKFKYSDY-FKPFSAGKRVCAGEGLARMELFLLLSAILQHFNLK 417          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP2B6_HUMAN (Cytochrome P450 2B6 OS=Homo sapiens GN=CYP2B6 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 44/164 (26.83%), Postives = 70/164 (42.68%), Query Frame = 1
Query:    7 LFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSF 498
            LF AG +TTS+T+ +    +L  P           Q +    P E  D  ++PY +AV+ E                       G+ +PK  +VF+ +     D   ++ P  F P+ FL +N   K +    IPF  G+RIC G  +A   L L   +++ +F
Sbjct:  295 LFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALK-KTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNF 457          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: C513B_DICDI (Probable cytochrome P450 513B1 OS=Dictyostelium discoideum GN=cyp513b1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 54/198 (27.27%), Postives = 89/198 (44.95%), Query Frame = 1
Query:    7 LFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXX----QTVCKCNPIEESDI--------TRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKF--GLTVQ 558
            +  AG+D+TSST  + + E+++NP               Q     + + ES +        + +PYL   +KE                  +  I G+T+ KG  +F N++A  R ++ +  P  FIPER+   N D   Q   LI FG G R C G  LA   +  ++ S++N +++   N ++  +D    GLT Q
Sbjct:  284 IITAGSDSTSSTALFFLIEMMNNPTIQTKVYNDIVVSFEQNQQADDYMNESMVILKYSKYRSLIPYLSLALKENYRKHPAAPFGAPHETTQETVIEGYTIAKGTMIFQNIYATQRSDTFYSQPDEFIPERW---NGDENSQT--LISFGTGIRDCIGKSLAYNEIFTIIASVLNRYEFINPNPSIPFDDNGIPGLTTQ 476          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11
Identity = 48/164 (29.27%), Postives = 71/164 (43.29%), Query Frame = 1
Query:   16 AGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK 507
            AG +TTS+T+ + +  L  +P            T     P     + ++ YL  VV E                  DVEI G ++PKG  V V ++ + RD   W  P  F PERF   N D     +  +PFG G R C G+  AI  + L +  ++ +F +K
Sbjct:  305 AGYETTSNTLSFLLYILATHPDVQQKLQEEIDATFPNKAPPTYDVLAQMEYLDMVVNETLRMFPIAVRLDRLCKK-DVEIHGVSIPKGTAVTVPIFVLHRDPQLWPEPEEFRPERFSKKNKD-SINPYVYLPFGTGPRNCIGMRFAIMNMKLAIVRVLQNFSFK 466          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP2F3_CAPHI (Cytochrome P450 2F3 OS=Capra hircus GN=CYP2F3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11
Identity = 47/165 (28.48%), Postives = 69/165 (41.82%), Query Frame = 1
Query:    4 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSF 498
            +L   G +T  +T+  A   L+  P           + V +       D   +PY  AV+ E                  D    GFT+P+G  V   +  +  D S +  P  F PE FL +N  FK ++   +PF AGRR+C G  LA   L L L +++ SF
Sbjct:  294 NLLFGGTETVGTTLRHAFRLLMKYPEVQVRVQEEIDRVVGRERLPTVEDRAEMPYTDAVIHEVQRFADIIPMSLPHRVTRDTNFRGFTIPRGTDVITLLNTVHYDPSQFLKPKEFNPEHFLDANMSFK-KSPAFMPFSAGRRLCLGEALARMELFLYLTAILQSF 457          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP2C1_RABIT (Cytochrome P450 2C1 OS=Oryctolagus cuniculus GN=CYP2C1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11
Identity = 41/166 (24.70%), Postives = 78/166 (46.99%), Query Frame = 1
Query:    1 ADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSF 498
            +D+F AG +TTS+T+ + +  L+ +P           + + +       D +R+PY  A V E                  +V+   + +PKG  V  ++ ++  ++  + NP  F P  FL ++  F+  ++  +PF  G+R+C G  LA   L L L +++ +F
Sbjct:  292 SDVFGAGTETTSTTLRYGLLLLMKHPEVIAKVQEEIERVIGRHRSPCMQDRSRMPYTDATVHEIQRYINLIPNNVPRATTCNVKFRSYLIPKGTAVITSLTSMLYNDKEFPNPDRFDPGHFLDASGKFRKSDY-FMPFSTGKRVCVGEVLARMELFLFLTAILQNF 456          
The following BLAST results are available for this feature:
BLAST of CB290520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 387
Match NameE-valueIdentityDescription
CP2DB_MOUSE7.154e-1227.45Cytochrome P450 2D11 OS=Mus musculus GN=Cyp2d11 PE... [more]
CP2G1_RAT9.343e-1226.67Cytochrome P450 2G1 OS=Rattus norvegicus GN=Cyp2g1... [more]
CP2F5_GORGO9.343e-1227.88Cytochrome P450 2F5 OS=Gorilla gorilla gorilla GN=... [more]
CP2F2_RAT9.343e-1227.88Cytochrome P450 2F2 OS=Rattus norvegicus GN=Cyp2f2... [more]
CP2E1_MACFA9.343e-1226.04Cytochrome P450 2E1 (Fragment) OS=Macaca fascicula... [more]
CP2B6_HUMAN9.343e-1226.83Cytochrome P450 2B6 OS=Homo sapiens GN=CYP2B6 PE=1... [more]
C513B_DICDI9.343e-1227.27Probable cytochrome P450 513B1 OS=Dictyostelium di... [more]
CP3AO_SHEEP1.220e-1129.27Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
CP2F3_CAPHI1.220e-1128.48Cytochrome P450 2F3 OS=Capra hircus GN=CYP2F3 PE=2... [more]
CP2C1_RABIT1.220e-1124.70Cytochrome P450 2C1 OS=Oryctolagus cuniculus GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ca05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ca05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290520 ID=CB290520; Name=CB290520; organism=Citrus sinensis; type=EST; length=790bp
GCGGATTTGTTTATTGCGGGGAATGACACAACTTCAAGTACAATGGAATG
GGCAATGGCAGAACTACTCCACAACCCTGAGGCTTTATTGAAAGCAAAAT
TGGAGCTAGAACAAACAGTTTGCAAGTGTAACCCAATTGAGGAATCTGAC
ATCACTCGGCTACCTTATCTACAAGCTGTTGTTAAAGAAACTTTGAGATT
GCACCCTGCAGCTCCCTTATTACTTCCCCGCAAAGCCACAAAAGATGTTG
AAATTGCAGGCTTCACAGTGCCAAAAGGTGCACAAGTTTTTGTCAATGTA
TGGGCTATTGGCAGAGATGAAAGCACATGGGACAACCCTCACACTTTTAT
TCCCGAAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGCCAGAATTTTG
AGCTAATTCCCTTCGGAGCTGGACGACGAATTTGTCCTGGTTTACCATTG
GCAATCAGAATGTTACATCTAATGTTGGGTTCACTTATTAACTCTTTTGA
TTGGAAGCTTGATAACCACAACATGGACATGGAAGATAAATTTGGCCTCA
CCGTACAGAAGGCTCAACCCCTTCATGCTGTCCCTGGTGCCATCTAGTTC
TATACTATAGTTCGTAGCCAATATATAAAGCGCTTGGTGGTAGCCACTAT
ATAAAGCGCTTGGTGGTTAGTTATATGTGTGTGTAATCATTCTCAGGTGT
GGGCGCTCTTATTTTTTTTTATGTAGACACGCAACTTAACAGAGTTAATC
TTCAATAAACTATAAAGTCATGCGAAAAAAAAAAAAAAAA
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