CB290520

Overview
NameCB290520
Unique NameCB290520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP2BF_RAT (Cytochrome P450 2B15 OS=Rattus norvegicus GN=Cyp2b15 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 43/164 (26.22%), Postives = 71/164 (43.29%), Query Frame = 1
Query:    7 LFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSF 498
            LF  G +TTS+T+ ++   +L  P           Q +         D T++PY  AV+ E                  D    G+ +PK  +V+  + +   D   +D+P TF PE FL  N   K ++   +PF  G+RIC G  +A   L +   +++ +F
Sbjct:  296 LFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLK-KSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNF 458          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: C97B2_SOYBN (Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 55/211 (26.07%), Postives = 84/211 (39.81%), Query Frame = 1
Query:    7 LFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDV-------EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL--GSNADFKG-------------------QNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTV 555
            + IAG++TT++ + WA+  L  NP             +    P  ES +  L Y++ +V E                  DV       E  G+ +P G  VF++V+ + R    WD P  F PERFL    N + +G                    +F  +PFG G R C G   A+    + L  L+ +FD +L      +E   G T+
Sbjct:  350 MLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEVDLVLGTGRPTFES-LKELQYIRLIVVEALRLYPQPPLLIRRSLKSDVLPGGHKGEKDGYAIPAGTDVFISVYNLHRSPYFWDRPDDFEPERFLVQNKNEEIEGWAGLDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGATI 559          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.550e-11
Identity = 50/164 (30.49%), Postives = 68/164 (41.46%), Query Frame = 1
Query:   16 AGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK 507
            AG +TTSS +     EL  +P            T     P     + ++ YL  VV E                  DVEI G  VPKG  V V V+ + RD   W  P  F PERF   + D     +  +PFG G R C G+  A+  + L L  ++ +F +K
Sbjct:  305 AGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKAPPTYDALAQMEYLDMVVNETLRLYPIAARLERACKK-DVEIHGVFVPKGTVVVVPVFVLHRDPDLWPEPEEFRPERFSKKHKDTINP-YTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP2AC_MOUSE (Cytochrome P450 2A12 OS=Mus musculus GN=Cyp2a12 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.550e-11
Identity = 45/181 (24.86%), Postives = 80/181 (44.20%), Query Frame = 1
Query:    4 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFEL---IPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMED 537
            +LF AG++T SST+ +    L+ +P           + + +    +  D  ++PY QAV+ E                  +    GF +PK  +VF  + ++  D   + +P  F P+ FL    D KGQ  ++   +PF  G+R C G  LA   L  +  +++ +F +K      D+ +
Sbjct:  295 NLFFAGSETVSSTLRYGFLLLMKHPDVEAKVHEEIDRVIGRNRQPQYEDHMKMPYTQAVINEIQRFSNFAPLGIPRRITKNTSFRGFFLPKATEVFPILGSLMTDPKFFSSPKDFNPQHFL----DDKGQLKKIPAFLPFSTGKRFCLGDSLAKMELFFLFTTILQNFRFKFPRKLEDINE 471          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: C97B3_ARATH (Cytochrome P450 97B3 OS=Arabidopsis thaliana GN=CYP97B3 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.550e-11
Identity = 56/211 (26.54%), Postives = 84/211 (39.81%), Query Frame = 1
Query:    7 LFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDV-------EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSN--------ADFKGQ-------------NFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTV 555
            + IAG++TT++ + WA+  L  NP             + +  P  ES + +L Y++ +V E                  +        E  G  VPKG  +F++V+ + R    WDNPH F PERFL +         A F                +F  +PFG G R C G   A+    + L  L   FD +L      +E   G T+
Sbjct:  356 MLIAGHETTAAVLTWAVFLLSQNPEKIRKAQAEIDAVLGQGPPTYES-MKKLEYIRLIVVEVLRLFPQPPLLIRRTLKPETLPGGHKGEKEGHKVPKGTDIFISVYNLHRSPYFWDNPHDFEPERFLRTKESNGIEGWAGFDPSRSPGALYPNEIIADFAFLPFGGGPRKCIGDQFALMESTVALAMLFQKFDVELRGTPESVELVSGATI 565          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP4V2_PONAB (Cytochrome P450 4V2 OS=Pongo abelii GN=CYP4V2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.637e-11
Identity = 46/161 (28.57%), Postives = 71/161 (44.10%), Query Frame = 1
Query:   19 GNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCN-PIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSF 498
            G+DTT++ + W++  L  NP               K + P    D+ +L YL+ V+KE                  D E+AG+ V KG +  +  +A+ RD   + NP  F PERF   NA  +   +  +PF AG R C G   A+     +L  ++  F
Sbjct:  330 GHDTTAAAINWSLYLLGCNPEVQQKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSE-DCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQGR-HPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHF 488          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP3A6_RABIT (Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CYP3A6 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.637e-11
Identity = 50/168 (29.76%), Postives = 71/168 (42.26%), Query Frame = 1
Query:    7 LFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 510
            +  AG +TTSST+ + M  L  +P             +          + ++ YL  VV E                  DV+I G  +PKG  V +  +A+ RD   W  P  F PERF   N D     +   PFGAG R C G+  A+  + L L  L+ +F +KL
Sbjct:  300 ILFAGYETTSSTLSFIMHLLATHPDVQQKLQEEIDTLLPNKELATYDTLVKMEYLDMVVNETLRLYPIAGRLERVCKK-DVDINGTFIPKGTIVMMPTYALHRDPQHWTEPDEFRPERFSKKNKD-NINPYIYHPFGAGPRNCLGMRFALMNIKLALVRLMQNFSFKL 465          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP2BC_RAT (Cytochrome P450 2B12 OS=Rattus norvegicus GN=Cyp2b12 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.637e-11
Identity = 43/164 (26.22%), Postives = 70/164 (42.68%), Query Frame = 1
Query:    7 LFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSF 498
            LF AG +TTS+T+      +L  P           Q +         D T++PY  AV+ E                  D    G+ +PK  +V+  + +   D   ++ P TF PE FL +N   K ++   +PF  G+RIC G  +A   L +   +++ +F
Sbjct:  296 LFFAGTETTSTTLRCTFLIMLKYPHVAEKVQKEIDQVIGSHRLPTPDDRTKMPYTDAVIHEIQRFADLTPIGLPHRVTKDTVFRGYLLPKNTEVYPILSSALHDPRYFEQPDTFNPEHFLDANGALK-KSEAFLPFSTGKRICLGEGIARNELFIFFTAILQNF 458          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: CP24A_HUMAN (1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial OS=Homo sapiens GN=CYP24A1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.637e-11
Identity = 48/191 (25.13%), Postives = 83/191 (43.46%), Query Frame = 1
Query:    4 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK-LDNHNMDMEDKFGLTVQKAQPL 573
            +L +A  +TT++++ W +  L  NP             + +       D+  +PYL+A +KE                   V +  + +PKG  + +N   +G  E  +++   F PER+L      K   F  +PFG G+R+C G  LA   LHL L  ++  +D +  DN  ++M     L   +  P+
Sbjct:  322 ELQLAAVETTANSLMWILYNLSRNPQVQQKLLKEIQSVLPENQVPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKATV-LGEYALPKGTVLMLNTQVLGSSEDNFEDSSQFRPERWLQEKE--KINPFAHLPFGVGKRMCIGRRLAELQLHLALCWIVRKYDIQATDNEPVEMLHSGTLVPSRELPI 509          
BLAST of CB290520 vs. ExPASy Swiss-Prot
Match: C554A_DICDI (Probable cytochrome P450 554A1 OS=Dictyostelium discoideum GN=cyp554a1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.637e-11
Identity = 45/169 (26.63%), Postives = 77/169 (45.56%), Query Frame = 1
Query:    4 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVCKCN--PIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXXDVEIAG--FTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSF 498
            D  +AG DTT ST+EW + +L++NP           Q + K N   I  +D    P+L + +KE                  ++ I    + +P    + ++V     DE+ + +P+ F P+RFL S         + + FG G R C G  +A+  +H+ L +LI ++
Sbjct:  311 DFLMAGTDTTGSTIEWIILKLVNNP----EFQELIFQELKKLNKSEITANDKINTPFLNSFIKETNRLYPIAPLSLPRKSINEMIIGDNKYYIPANTNILMDVKGFSLDENNYKDPNEFKPDRFLNSKVS------DTLNFGIGPRNCIGQTIAMNQIHIFLSNLILNY 469          
The following BLAST results are available for this feature:
BLAST of CB290520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 387
Match NameE-valueIdentityDescription
CP2BF_RAT2.718e-1126.22Cytochrome P450 2B15 OS=Rattus norvegicus GN=Cyp2b... [more]
C97B2_SOYBN2.718e-1126.07Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=... [more]
CP3AT_PIG3.550e-1130.49Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
CP2AC_MOUSE3.550e-1124.86Cytochrome P450 2A12 OS=Mus musculus GN=Cyp2a12 PE... [more]
C97B3_ARATH3.550e-1126.54Cytochrome P450 97B3 OS=Arabidopsis thaliana GN=CY... [more]
CP4V2_PONAB4.637e-1128.57Cytochrome P450 4V2 OS=Pongo abelii GN=CYP4V2 PE=2... [more]
CP3A6_RABIT4.637e-1129.76Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP2BC_RAT4.637e-1126.22Cytochrome P450 2B12 OS=Rattus norvegicus GN=Cyp2b... [more]
CP24A_HUMAN4.637e-1125.131,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho... [more]
C554A_DICDI4.637e-1126.63Probable cytochrome P450 554A1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ca05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ca05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290520 ID=CB290520; Name=CB290520; organism=Citrus sinensis; type=EST; length=790bp
GCGGATTTGTTTATTGCGGGGAATGACACAACTTCAAGTACAATGGAATG
GGCAATGGCAGAACTACTCCACAACCCTGAGGCTTTATTGAAAGCAAAAT
TGGAGCTAGAACAAACAGTTTGCAAGTGTAACCCAATTGAGGAATCTGAC
ATCACTCGGCTACCTTATCTACAAGCTGTTGTTAAAGAAACTTTGAGATT
GCACCCTGCAGCTCCCTTATTACTTCCCCGCAAAGCCACAAAAGATGTTG
AAATTGCAGGCTTCACAGTGCCAAAAGGTGCACAAGTTTTTGTCAATGTA
TGGGCTATTGGCAGAGATGAAAGCACATGGGACAACCCTCACACTTTTAT
TCCCGAAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGCCAGAATTTTG
AGCTAATTCCCTTCGGAGCTGGACGACGAATTTGTCCTGGTTTACCATTG
GCAATCAGAATGTTACATCTAATGTTGGGTTCACTTATTAACTCTTTTGA
TTGGAAGCTTGATAACCACAACATGGACATGGAAGATAAATTTGGCCTCA
CCGTACAGAAGGCTCAACCCCTTCATGCTGTCCCTGGTGCCATCTAGTTC
TATACTATAGTTCGTAGCCAATATATAAAGCGCTTGGTGGTAGCCACTAT
ATAAAGCGCTTGGTGGTTAGTTATATGTGTGTGTAATCATTCTCAGGTGT
GGGCGCTCTTATTTTTTTTTATGTAGACACGCAACTTAACAGAGTTAATC
TTCAATAAACTATAAAGTCATGCGAAAAAAAAAAAAAAAA
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