CB290527

Overview
NameCB290527
Unique NameCB290527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.086e-41
Identity = 83/120 (69.17%), Postives = 99/120 (82.50%), Query Frame = -2
Query:  413 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDA 772
            KMKGDY+RY+AEFK GDE+K AA ++M           AD+ PTHPIRLGLALNFSVFYYEI+NS ++AC++AKQAF+EAI+ELDTL EESYKDSTLIMQL RDNLTLWTSD+ E  ++A
Sbjct:  129 KMKGDYHRYMAEFKSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDEA 248          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 143BB_XENLA (14-3-3 protein beta/alpha-B OS=Xenopus laevis GN=ywhab-B PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.852e-41
Identity = 84/125 (67.20%), Postives = 96/125 (76.80%), Query Frame = -2
Query:  398 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQKANG 772
            KMKGDYYRYL+E   GD K+E  ANS +          +++ PTHPIRLGLALNFSVFYYEI+NSP++AC LAK AFDEAI+ELDTLNEESYKDSTLIMQL RDNLTLWTS+    GE+A    G
Sbjct:  120 KMKGDYYRYLSEVASGDSKQETVANSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPDKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSE--TQGEEADNVEG 242          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 143BA_XENLA (14-3-3 protein beta/alpha-A OS=Xenopus laevis GN=ywhab-A PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.419e-41
Identity = 84/125 (67.20%), Postives = 96/125 (76.80%), Query Frame = -2
Query:  398 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQKANG 772
            KMKGDYYRYL+E   GD K+E  A+S +          +++ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLNEESYKDSTLIMQL RDNLTLWTS+    GE+A    G
Sbjct:  120 KMKGDYYRYLSEVASGDSKQETVASSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSE--NQGEEADNVEG 242          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433_SPIOL (14-3-3-like protein (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.419e-41
Identity = 83/119 (69.75%), Postives = 98/119 (82.35%), Query Frame = -2
Query:  416 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGED 772
            KMKGDY+RYLAEFK G ++KEAA +++           A+L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAF EAI+ELDTL E+SYKDSTLIMQL RDNLTLWTSD+ ++  D
Sbjct:   82 KMKGDYHRYLAEFKTGAQRKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFVEAIAELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDEAAD 200          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.419e-41
Identity = 84/130 (64.62%), Postives = 101/130 (77.69%), Query Frame = -2
Query:  398 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDI-----PEDGEDAQKANG 772
            KMKGDY+RYLAEF  G+ +K +A +S+            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC+LAK AFD+AI+ELDTL+E+SYKDSTLIMQL RDNLTLWTSD+      +DG+D Q   G
Sbjct:  122 KMKGDYFRYLAEFATGNPRKTSAESSLIAYKAASDIAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKTAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSDVHNMEKNQDGDDDQNEPG 251          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.159e-41
Identity = 87/136 (63.97%), Postives = 100/136 (73.53%), Query Frame = -2
Query:  365 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQKANGTAKVGGGEDAE 772
            KMKGDYYRYLAEF  G+  KEAA +S++          A+LPPT P+RLGLALNFSVFYYEI++SPE ACHLAKQ FDEAISELD+L+EESYKDSTLIMQL RDNLTLWTSD   +    ++A   A     E  E
Sbjct:  124 KMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDAEYNQSAKEEAPAAAAASENEHPE 259          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.159e-41
Identity = 88/135 (65.19%), Postives = 103/135 (76.30%), Query Frame = -2
Query:  368 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQKANGTAKVGGGEDA 772
            KMKGDYYRYLAEF  G++++ +A  S++          A+L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELD+L+EESYKDSTLIMQL RDNLTLWTS    D E +  A G    G  E+A
Sbjct:  125 KMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTS----DAEYSAAAAGGNTEGAQENA 255          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.159e-41
Identity = 80/115 (69.57%), Postives = 95/115 (82.61%), Query Frame = -2
Query:  428 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPE 772
            K+KGDY+RYLAEF  GD +K++A  S++           +LPPTHPIRLGLALNFSVFYYEI+N+P++ACHLAKQAFD+AI+ELDTL+EESYKDSTLIMQL RDNLTLWTS   E
Sbjct:  122 KIKGDYHRYLAEFAIGDRRKDSADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSSEAE 236          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.159e-41
Identity = 84/112 (75.00%), Postives = 94/112 (83.93%), Query Frame = -2
Query:  437 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSD 772
            KMKGDY+RYLAEFK G E+KEAA N++           A+L PTHPIRLGLALNFSVFYYEI+NS +RAC+LAKQAFD+AI+ELDTL EESYKDSTLIMQL RDNLTLWTSD
Sbjct:  127 KMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSSDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 238          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.159e-41
Identity = 82/115 (71.30%), Postives = 94/115 (81.74%), Query Frame = -2
Query:  428 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPE 772
            KMKGDY+RYLAEFK GDE+K A  ++M           ADLPPTHPIRLGLALNFSVFYYEI+N  ++AC +AKQAF+EAI+ELDTL EESYKDSTLIMQL RDNLTLWTSD+ +
Sbjct:  128 KMKGDYHRYLAEFKVGDERKTATEDTMLSYKAAQDIASADLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQD 242          
The following BLAST results are available for this feature:
BLAST of CB290527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14336_ARATH1.086e-4169.1714-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
143BB_XENLA1.852e-4167.2014-3-3 protein beta/alpha-B OS=Xenopus laevis GN=y... [more]
143BA_XENLA2.419e-4167.2014-3-3 protein beta/alpha-A OS=Xenopus laevis GN=y... [more]
1433_SPIOL2.419e-4169.7514-3-3-like protein (Fragment) OS=Spinacia olerace... [more]
1433_DICDI2.419e-4164.6214-3-3-like protein OS=Dictyostelium discoideum GN... [more]
RAD25_SCHPO3.159e-4163.97DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
RAD24_SCHPO3.159e-4165.19DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
1433_TRIHA3.159e-4169.5714-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
1433E_TOBAC3.159e-4175.0014-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
1433B_SOYBN3.159e-4171.3014-3-3-like protein B (Fragment) OS=Glycine max GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ca09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ca09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290527 ID=CB290527; Name=CB290527; organism=Citrus sinensis; type=EST; length=773bp
TTTTTTTTTATTTTTTCATGTGAACTTCAACATTAAAAACATACCAGTGA
TGTCCAAATAGCAGAAATCCTCCTGTGGCATTTACACCTAAATAAGAAAA
ACACCTTGTGCAATCAGACCAAATAATCCTCTACTACACTCCATCCATCA
TGACAGGAGGGAAACAATGGGAGGCAGGACAAGTACGACCAATCGGGTTT
GGACAACCATGCTATAAAGTAAGCCATACCACAATATGGCACTATTAAAA
TGAAAATACAGCAAGCAAAAGACAATGGCACTTTAAGCAAACACTAAGTT
TGATTAACAAGTCTCATCCTTTCTCCCCCAATCACATAGCAACTCCTCGA
TGCTCTCCTTGTCACTCTGCATCTTCTCCCCCACCAACTTTGGCAGTGCC
ATTAGCCTTCTGGGCATCTTCTCCATCTTCTGGAATGTCAGAAGTCCATA
AGGTAAGGTTGTCCCTAAAAAGCTGCATAATTAAGGTGCTGTCTTTGTAG
GACTCCTCGTTGAGGGTGTCCAGCTCGGAAATAGCTTCATCAAAAGCTTG
TTTTGCAAGATGGCAAGCCCTTTCAGGAGAATTCATGATCTCATAATAAA
AGACAGAGAAATTCAGAGCCAAACCCAATCGGATGGGATGTGTAGGTGGC
AAATCAGCCTCTGCAGCAGTGGTAGCTGTCTCATATGCTTTCATTGAATT
AGCAGCAGCCTCTTTCTTCTCATCGCCAAACTTGAATTCAGCAAGGTACC
GATAATAATCTCCTTTCATCTTA
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