CB290528

Overview
NameCB290528
Unique NameCB290528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290528 vs. ExPASy Swiss-Prot
Match: 1433_ENCCU (14-3-3 protein homolog OS=Encephalitozoon cuniculi GN=ECU03_1010 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.256e-53
Identity = 118/241 (48.96%), Postives = 153/241 (63.49%), Query Frame = 1
Query:   13 SSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE----LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAG---ESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTS 714
            +SK+ E  +  A L++ AERYD+M   M+    L  E    L V  RNL SV YKN++ +RR+SWR+L S  QK E K   V    I E  + VE EL   C++++ +I  +++    A    E  +FF KMKGDYYRY AE   G E  E + ++ +            LPPT+PI+LGLALN+SVF+YEI+N  E+AC +AK AFDEAI ELDTL+EE Y+DSTLIMQLLRDNLTLWTS
Sbjct:    2 ASKQYEEALQKANLSDMAERYDDMAKEMRLAVTLAHEDKHILNVMARNLFSVAYKNLVSSRRSSWRMLCSERQKLEGKDPSV-VHVINEKIKVVEEELLRFCDEVLDIITTYILSLEEAQKNIEYNIFFLKMKGDYYRYKAEVVTGPEHSEVSKHAAESYKEATEKAKT-LPPTNPIKLGLALNYSVFHYEILNDSEKACSIAKGAFDEAIKELDTLSEEHYRDSTLIMQLLRDNLTLWTS 240          
BLAST of CB290528 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.984e-43
Identity = 103/213 (48.36%), Postives = 121/213 (56.81%), Query Frame = 1
Query:   91 AMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPED 729
            AMKNV +L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK                                                T F+ KMKGDYYRYLAE   G+++     +S K            + PTHPIRLGLALN+SVFYYEI             AFD+AI+ELDTLNE+SYKDSTLIMQLLRDNLTLWTSD  +D
Sbjct:    3 AMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQK------------------------------------------------TSFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEI------------TAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDD 155          
BLAST of CB290528 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.153e-21
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 1
Query:  565 IMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 747
            I+NSP+RAC+LAKQAFDEAISELD+L EESYKDSTLIMQLL DNLTLWTSD  EDG D  K
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNEDGGDEIK 61          
BLAST of CB290528 vs. ExPASy Swiss-Prot
Match: U4976_SOYBN (UPF0497 membrane protein 6 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.229e-14
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = 1
Query:    7 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEER 141
            MA+SK+RENFVY+AKLAEQAERY+EMV++MKNVA LDVELTVEER
Sbjct:    1 MAASKDRENFVYIAKLAEQAERYEEMVESMKNVANLDVELTVEER 45          
The following BLAST results are available for this feature:
BLAST of CB290528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
1433_ENCCU9.256e-5348.9614-3-3 protein homolog OS=Encephalitozoon cuniculi... [more]
1433G_SHEEP2.984e-4348.3614-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]
1433X_MAIZE7.153e-2181.9714-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]
U4976_SOYBN2.229e-1484.44UPF0497 membrane protein 6 OS=Glycine max PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ca09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ca09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290528 ID=CB290528; Name=CB290528; organism=Citrus sinensis; type=EST; length=838bp
GCGGCCATGGCTTCCTCTAAAGAACGCGAAAACTTCGTCTACGTCGCCAA
GCTCGCTGAACAAGCCGAGCGCTACGACGAGATGGTGGATGCGATGAAAA
ATGTTGCGAAGCTTGATGTGGAATTGACGGTTGAGGAGCGCAACTTGCTC
TCTGTTGGCTACAAGAATGTAATTGGTGCTCGAAGAGCATCGTGGAGGAT
ACTTTCGTCAATTGAGCAAAAGGAAGAAGCGAAAGGGAATGAAGTGAATG
CAAAGCGGATCAAGGAGTATAGGCAAAAGGTTGAATCTGAATTGTCGGAC
ATTTGCAATGATATCATGACTGTCATTGATGAGCATCTTATTCCTTCAGC
AAGTGCTGGTGAATCAACTGTGTTCTTCTATAAGATGAAAGGAGATTATT
ATCGGTACCTTGCTGAATTCAAGTTTGGCGATGAGAAGAAAGAGGCTGCT
GCTAATTCAATGAAAGCATATGAGACAGCTACCACTGCTGCAGAGGCTGA
TTTGCCACCTACACATCCCATCCGATTGGGTTTGGCTCTGAATTTCTCTG
TCTTTTATTATGAGATCATGAATTCTCCTGAAAGGGCTTGCCATCTTGCA
AAACAAGCTTTTGATGAAGCTATTTCCGAGCTGGACACCCTCAACGAGGA
GTCCTACAAAGACAGCACCTTAATTATGCAGCTTCTTAGGGACAACCTTA
CCTTATGGACTTCTGACATTCCAGAAGATGGAGAAGATGCCCAGAAGGCT
AATGGCACTGCCAAAGTTGGTGGGGGAGAAGATGCAGAGTGACAAGGAGA
GCATCGAGGAGTTGCTATGTGATTGGGGGAGAAAGGAT
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