CB290533

Overview
NameCB290533
Unique NameCB290533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290533 vs. ExPASy Swiss-Prot
Match: MPPA_YEAST (Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces cerevisiae GN=MAS2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 55/188 (29.26%), Postives = 96/188 (51.06%), Query Frame = 2
Query:  287 HTHILAAPETKITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYT 850
            +++I      K+++L NGL+VAT SN     + +G++IDAGSRFE     G  H L+ + FK TE    R + E +E +GG+    +SRE   Y A V ++DV   L ++++ ++     +  +  ++                V+ + LH  A+    LG  ++ P + I +I+K +L +Y +  YT
Sbjct:   10 YSNIARTDNFKLSSLANGLKVAT-SNTPGHFSALGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVEGRAMAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSETVRFPKITEQELQEQKLSAEYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRELIPSISKYYLLDYRNKFYT 196          
BLAST of CB290533 vs. ExPASy Swiss-Prot
Match: MPPA2_ARATH (Probable mitochondrial-processing peptidase subunit alpha-2 OS=Arabidopsis thaliana GN=At3g16480 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 60/194 (30.93%), Postives = 93/194 (47.94%), Query Frame = 2
Query:  272 PTLTSHTHILAAPETKITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTA 853
            P L+ H       + K TTLPNGL +ATE +     A++G+++D GS +ET +  G  H LE M FK T  R+   L  EIE +GG+ +A  SREQ  Y    L   V   +++L D ++N  F    +  E   +              + + +H+  +    L   +  P   I  +T E L+N++  +YTA
Sbjct:   63 PPLSDHVE---PSKLKTTTLPNGLTIATEMS-PNPAASIGLYVDCGSIYETPQFRGATHLLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELRKVKVEIGEFATNPMGFLLEAVHSAGYS-GALANPLYAPESAITGLTGEVLENFVFENYTA 251          
BLAST of CB290533 vs. ExPASy Swiss-Prot
Match: MPPA_PONAB (Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii GN=PMPCA PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.427e-18
Identity = 57/183 (31.15%), Postives = 95/183 (51.91%), Query Frame = 2
Query:  311 ETKITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARD-LEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADIL--QNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYT 850
            ETK+TTL NGLRVA++ N   +  TVG+ I++GSR+E    +G AHFLE + F  T +  ++D +   +E  GG  +  TSR+ T Y      K ++  + +LAD++     T ++  +TR                  ++ + +H  A++   +G     P +NI  I +E L +Y+  +YT
Sbjct:   66 ETKVTTLDNGLRVASQ-NKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLQPRLTDEEVEMTRMTVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENIAKINREVLHSYLRNYYT 247          
BLAST of CB290533 vs. ExPASy Swiss-Prot
Match: MPPA_SOLTU (Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.782e-18
Identity = 52/181 (28.73%), Postives = 94/181 (51.93%), Query Frame = 2
Query:  311 ETKITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTA 853
            +T+ITTL NGL+VA+E+++    A++G+++D GS +ET  + G  H LE M FK T  R+   +  EIE +GG++ A  SRE   Y    L   V   +++LAD ++N  F    +  + + +             ++ + +H+  +   P G +++     I  +    L+ ++  +YTA
Sbjct:   74 KTQITTLANGLKVASEASVNP-AASIGLYVDCGSIYETPASYGATHLLERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLADCVRNPAFLDWEVKEQLEKVKAEISEYSKNPQHLLLEAVHSAGYA-GPYGNSLMATEATINRLNSTVLEEFVAENYTA 252          
BLAST of CB290533 vs. ExPASy Swiss-Prot
Match: YL233_MIMIV (Putative zinc protease L233 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L233 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.551e-18
Identity = 55/176 (31.25%), Postives = 87/176 (49.43%), Query Frame = 2
Query:  326 TLPNGLR-VATESNLAAKTATVGVWIDAGSRFETDE-TNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHY 847
            TL NGL+ V    N       +G ++  GSR E     NG +HFLEHM+FK T  +++ +L  E+++ G + NA T+ + T Y+       ++  LDI+ DI  +  F    I RER VI+             +   +H   F+ T L + ++G  ++IK I K  L+ +  T Y
Sbjct:    7 TLKNGLKLVFVPMNNDIPLVAMGFYVGVGSRNEFGAYKNGISHFLEHMMFKRTTNKSSDELFSELDSTGANYNAITTTQNTCYFLSGNSNYIDKLLDIMLDIFLHPNFVSDDIERERKVIMEEMKIRADQPQSSMTYQIHEVYFKNTSLSQKVIGSIESIKNIDKNDLEKFYSTFY 182          
BLAST of CB290533 vs. ExPASy Swiss-Prot
Match: MPPA_HUMAN (Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens GN=PMPCA PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.551e-18
Identity = 56/183 (30.60%), Postives = 95/183 (51.91%), Query Frame = 2
Query:  311 ETKITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARD-LEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADIL--QNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYT 850
            ETK+TTL NGLRVA++ N   +  TVG+ I++GSR+E    +G AHFLE + F  T +  ++D +   +E  GG  +  TSR+ T Y      K ++  + +LAD++     T ++  +TR                  ++ + +H  A++   +G     P +N+  I +E L +Y+  +YT
Sbjct:   66 ETKVTTLDNGLRVASQ-NKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYT 247          
BLAST of CB290533 vs. ExPASy Swiss-Prot
Match: MPPA_RAT (Mitochondrial-processing peptidase subunit alpha OS=Rattus norvegicus GN=Pmpca PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.862e-18
Identity = 57/183 (31.15%), Postives = 96/183 (52.46%), Query Frame = 2
Query:  311 ETKITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARD-LEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNS--TFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYT 850
            ETK+TTL NGLRVA++ N   +  T+G+ I++GSR+E    +G AHFLE + F  T +  ++D +   +E  GG  +  TSR+ T Y      K ++  + +LAD++ +   T ++  +TR                  ++ + +H  AF+   +G     P +NI  I +E L +Y+  +YT
Sbjct:   65 ETKVTTLDNGLRVASQ-NKFGQFCTLGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHPRLTDEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIGKIDREVLHSYLKNYYT 246          
BLAST of CB290533 vs. ExPASy Swiss-Prot
Match: MPPA_BOVIN (Mitochondrial-processing peptidase subunit alpha OS=Bos taurus GN=PMPCA PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.869e-17
Identity = 55/183 (30.05%), Postives = 94/183 (51.37%), Query Frame = 2
Query:  311 ETKITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARD-LEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVIL--RXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYT 850
            ETK+TTL NGLRVA++ N   +  TVG+ I++GSR+E    +G AHFLE + F  TE+  ++D +   +E  GG  +  TSR+ T Y      K ++  + +LAD++ +       I   R  +               ++ + +H  A++   +G     PA+N+  + ++ L  Y+  +YT
Sbjct:   66 ETKVTTLDNGLRVASQ-NKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTERFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHPRLTDEEIEMARMAVQFELEDLNMRPDPEPLLTEMVHEAAYRENTVGLHRFCPAENVGKMDRDVLHAYLRNYYT 247          
BLAST of CB290533 vs. ExPASy Swiss-Prot
Match: MPPA_SCHPO (Probable mitochondrial-processing peptidase subunit alpha OS=Schizosaccharomyces pombe GN=mas2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.392e-17
Identity = 49/182 (26.92%), Postives = 88/182 (48.35%), Query Frame = 2
Query:  302 AAPETKITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHY 847
            A  E +   L NG+    +       + +GV++ AGSR+ET + +G +HF++ + F+ TE+    +++ ++EN+GG+    TSRE   Y A V + DV +   +LA+ +      +  +   RD I+            ++ +  H TAFQ   LG  +L     +  IT   ++ Y+   Y
Sbjct:   42 ALNEVRTEKLKNGVTYVCDPR-PGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQATERTPVGEMKAKLENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPKIQEDDLVHYRDSIIYENSELWTKPDALLGEFAHVTAFQNNTLGNCLLCTPDKVNGITATSIREYLKYFY 222          
BLAST of CB290533 vs. ExPASy Swiss-Prot
Match: MPPA1_ARATH (Probable mitochondrial-processing peptidase subunit alpha-1 OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.392e-17
Identity = 53/179 (29.61%), Postives = 89/179 (49.72%), Query Frame = 2
Query:  317 KITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTA 853
            +ITTLPNGL++A+E+      A++G+++D GS +E    +G  H LE M FK T  RT   L  EIE +GG+ +A  SREQ +Y    L   V   +++L D ++N  F    +  E   +              + + +H+  +   PL   +  P   +  +  E L+ ++  ++TA
Sbjct:   79 QITTLPNGLKIASETT-PNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTLNRTHFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELRKMKVEIAELAKNPMGFLLEAIHSAGYS-GPLASPLYAPESALDRLNGELLEEFMTENFTA 255          
The following BLAST results are available for this feature:
BLAST of CB290533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
MPPA_YEAST8.920e-1929.26Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA2_ARATH8.920e-1930.93Probable mitochondrial-processing peptidase subuni... [more]
MPPA_PONAB4.427e-1831.15Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_SOLTU5.782e-1828.73Mitochondrial-processing peptidase subunit alpha O... [more]
YL233_MIMIV7.551e-1831.25Putative zinc protease L233 OS=Acanthamoeba polyph... [more]
MPPA_HUMAN7.551e-1830.60Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_RAT9.862e-1831.15Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_BOVIN2.869e-1730.05Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_SCHPO6.392e-1726.92Probable mitochondrial-processing peptidase subuni... [more]
MPPA1_ARATH6.392e-1729.61Probable mitochondrial-processing peptidase subuni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ca12_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ca12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290533 ID=CB290533; Name=CB290533; organism=Citrus sinensis; type=EST; length=855bp
GCACTAGGATCATCAGTGAGTCCAAACGATGGCGTTTAAGCATCTTTTAA
CCCTAGCTCGCCGGTCTCACAGGCCTTCGTCCACGGCCCTCTTTACCGCC
ATCCGATCCTCCTCCTCCGCCTCACCCCTCGCCACGTCACCATCGTCTCC
GCCGCCGTCCCCGCCTCCCCCAAATGTCATGATCTACGACCGTCTCGCCG
AAGCCGTCAAAGCCAAGCTCAAAAACCTAGAAAACCCCGACCCGAAGTTC
TTAAAGTACGGATCCCCGCACCCGACCCTTACTTCCCACACGCACATCCT
CGCCGCGCCGGAGACCAAAATCACGACTTTGCCTAACGGACTCCGCGTCG
CCACCGAGTCGAACCTCGCCGCGAAGACGGCCACAGTTGGAGTTTGGATT
GACGCCGGCTCGAGGTTCGAGACTGATGAGACGAACGGGACGGCTCATTT
CTTGGAGCATATGATATTCAAGGGGACGGAGAAGCGGACTGCGAGAGATT
TGGAGGAGGAGATCGAGAATATGGGGGGGCATTTGAATGCTTACACTAGC
AGGGAACAGACGACCTATTATGCCAAGGTGTTGGATAAGGATGTGAATAA
TGCTTTGGATATTTTGGCTGATATTTTGCAGAACTCGACGTTTGATCAAG
CGAGGATCACCAGGGAACGGGATGTTATTTTGAGAGAAATGGAGGAGGTT
GAGGGGCAAACAGAGGAAGTCATTTTTGATCATTTGCATGCAACTGCATT
CCAGTACACTCCTTTGGGGAGAACTATTCTCGGTCCTGCTCAGAATATCA
AGACAATCACAAAAGAACATCTGCAGAACTATATTCACACTCACTATACT
GCTCC
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