CB290580

Overview
NameCB290580
Unique NameCB290580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.994e-32
Identity = 73/234 (31.20%), Postives = 124/234 (52.99%), Query Frame = 3
Query:  135 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            DLL A  +F  F   +NK Y    E +RRF+IF+  L     + +L+ SA + + +F+DL+  E    Y GL   ++         I  P    P +FDWR++  V  +K+Q +CG+CW+F+T  ++E    +     + LSEQQ++DCD+          D GC+GGL+++AFE  ++ G L++E +YPY G ++    + D++ +      +  V   E+++   L   GP+
Sbjct:   23 DLLKAGDYFETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGLNMPVQTTNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY---------VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFREEKLKDLLRAVGPI 247          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.216e-32
Identity = 89/234 (38.03%), Postives = 123/234 (52.56%), Query Frame = 3
Query:  126 TNNDLLGAEHHFSLFKK--KFNKAYASQEEHDRRFTIFKANLRRAAR-RQKLDPSATHGVTQFSDLTPAEFRRTYLGL-----RRKLRLPKDADQAPILPTNDLPA-DFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQ 800
            T  DL   +  ++L++K    +      +E +RRF +FK N++      QK D      + +F D+T  EFR  Y G      R +  + K+           LPA   DWR KGAV  VKDQG CGSCW+FST  ++EG N + TG+LVSLSEQ+LVDCD         S + GCNGGLM+ AFE+ ++  G+  E+ YPY   D            A+++ N  VVS+D  Q
Sbjct:   26 TEKDLASEDSLWNLYEKWRTHHTVARDLDEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCD--------TSYNEGCNGGLMDYAFEF-IQKNGITTEDSYPYAEQD---------GTCASNLLNSPVVSIDGHQ 241          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.812e-32
Identity = 85/230 (36.96%), Postives = 115/230 (50.00%), Query Frame = 3
Query:  156 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHG----VTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            H+  +K    + Y   EE  RR  +++ N +      +      HG    +  F D+T  EFR+   G + +          P+L   D+P   DW +KG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC            + GCNGGLM++AF+Y    G L  EE YPY  TD  ++C +     AA+   F  +   E  +   +   GP+
Sbjct:   28 HWHQWKATHRRLYGMNEEEWRR-AVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLV--DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDT-NSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPI 246          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.162e-31
Identity = 96/258 (37.21%), Postives = 130/258 (50.39%), Query Frame = 3
Query:  102 EILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEH---DRRFTIFKANLRRAARRQKLD--PSATHGVTQFSDLTPAEFRRTYLG-LRRKLRLPKDADQAP-----ILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGH---ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            E+ S     + DL   E  + L+++ +  A+  +  H    RRF  FK+N        K    P   H + +F D+  AEFR T++G LRR    P      P      L  +DLP   DWR+KGAV  VKDQG CGSCW+FST  ++EG N + TG LVSLSEQ+L+DCD         + + GC GGLM++AFEY    GGL+ E  YPY    RG    A     S +   +     V  + ++  A  V N P+
Sbjct:   24 ELCSAIPMEDKDLESEEALWDLYER-WQSAHRVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLH-LNRFGDMDQAEFRATFVGDLRRDT--PSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD--------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAA-RGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPV 268          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.518e-31
Identity = 96/258 (37.21%), Postives = 130/258 (50.39%), Query Frame = 3
Query:  102 EILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEH---DRRFTIFKANLRRAARRQKLD--PSATHGVTQFSDLTPAEFRRTYLG-LRRKLRLPKDADQAP-----ILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGH---ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            E+ S     + DL   E  + L+++ +  A+  +  H    RRF  FK+N        K    P   H + +F D+  AEFR T++G LRR    P      P      L  +DLP   DWR+KGAV  VKDQG CGSCW+FST  ++EG N + TG LVSLSEQ+L+DCD         + + GC GGLM++AFEY    GGL+ E  YPY    RG    A     S +   +     V  + ++  A  V N P+
Sbjct:   24 ELCSAIPMEDKDLESEEALWDLYER-WQSAHRVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLH-LNRFGDMDQAEFRATFVGDLRRDT--PAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD--------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAA-RGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPV 268          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.518e-31
Identity = 84/236 (35.59%), Postives = 117/236 (49.58%), Query Frame = 3
Query:  150 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPL 833
            +HH++L+KK + K Y  + E   R  I++ NL+             H    G+    D+T  E     + L   LR+P    +     +N    LP   DWREKG V  VK QGSCG+CW+FS  GALE    L TGKLVSLS Q LVDC  +         + GCNGG M  AF+Y +   G+  E  YPY  TD+   C++D    AA+ + ++ +    + +    V N GP+
Sbjct:   25 DHHWNLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEV----MSLMSSLRVPNQWQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYG-------NKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQ--KCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPV 247          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 1.518e-31
Identity = 76/185 (41.08%), Postives = 102/185 (55.14%), Query Frame = 3
Query:  279 SATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            S T  +  F D+T  EFR+   G + +        Q  +LP  ++P   DWREKG + PVKDQG CGSCW+FS TGALEG  F  TGKL+SL+EQ LVDC     P+     + GCNGG M++ F Y  + GGL  E  YPY G  +   C+++    AA+   F  +   E  +A  +   GP+
Sbjct:   15 SFTMAMNAFGDMTNEEFRQVMNGFQYQKHRKGKQFQERLLP--EIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCS---GPQG----NEGCNGGFMDNPFRYVQENGGLDSEASYPYEG--KVKTCRYNPKYSAANDTGFVDIPSQEKDLAKAVATVGPI 188          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.518e-31
Identity = 74/181 (40.88%), Postives = 98/181 (54.14%), Query Frame = 3
Query:  177 KFNKAYASQEEHDRRFTIFKANLRRAARRQK-LDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 716
            K+ K+Y S  E +RRF IFK  LR         + S   G+ QF+DLT  EFR TYLG        K +++        LP+  DWR  GAV  +K QG CG CW+FS    +EG N + TG L+SLSEQ+L+DC    +         GCNGG +   F++ +  GG+  EE+YPYT  D
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQD 221          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.982e-31
Identity = 85/236 (36.02%), Postives = 120/236 (50.85%), Query Frame = 3
Query:  150 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPL 833
            +HH++L+KK ++K Y  + E   R  I++ NL+             H    G+    D+T  E     + L   LR+P    +     +N    LP   DWREKG V  VK QGSCG+CW+FS  GALE    L TGKLVSLS Q LVD    C  E+ G  + GCNGG M +AF+Y +   G+  E  YPY   +    C++D  K AA+ + ++ +    ED +   +   GP+
Sbjct:   25 DHHWNLWKKTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEV----ISLMGSLRVPSQWQRNVTYRSNSNQKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVD----CSTEKYG--NKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMN--GKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPV 248          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.982e-31
Identity = 85/227 (37.44%), Postives = 119/227 (52.42%), Query Frame = 3
Query:  168 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            +K    + Y   EE  RR  +++ N++      +      HG +     F D+T  EFR+   G + +K +  K   ++ +L   ++P   DWREKG V  VK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC            + GCNGGLM++AF+Y    GGL  EE YPY G +  ++C +     AA+   F  +   E  +   +   GP+
Sbjct:   32 WKATHGRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHESLVL---EVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRET-NSCTYKPECSAANDTGFVDIPQREKALMKAVATVGPI 246          
The following BLAST results are available for this feature:
BLAST of CB290580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CATV_NPVBS3.994e-3231.20Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CYSP_HEMSP5.216e-3238.03Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CATL2_BOVIN6.812e-3236.96Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CYSP2_HORVU1.162e-3137.21Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU1.518e-3137.21Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CATS_SAIBB1.518e-3135.59Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATL6_HUMAN1.518e-3141.08Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
ACTN_ACTDE1.518e-3140.88Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CATS_CANFA1.982e-3136.02Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATL1_PIG1.982e-3137.44Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd02_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290580 ID=CB290580; Name=CB290580; organism=Citrus sinensis; type=EST; length=835bp
GCACTTGGCTGGTCTCTCTCGTCGTCGTCTCCGCCGTTTCATCAGGGACG
TTGATCGACGATGTTGATCAGCTGATCAGGCAAGTAACGGACGGCGGTGA
CGAGATCCTAAGCCACCACGAGAGCACCAACAACGACCTCTTGGGCGCAG
AGCACCACTTCTCCCTATTCAAGAAGAAGTTCAATAAAGCGTACGCTTCG
CAGGAGGAGCACGACCGTAGGTTCACTATTTTCAAGGCCAACTTGCGACG
CGCCGCGCGTCGCCAGAAGCTCGACCCGAGCGCCACCCACGGCGTCACTC
AGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTC
AGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCC
TACGAATGATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAG
GCCCTGTTAAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACA
ACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAG
CCTCAGTGAGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGG
AACCAGGTTCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCT
TTTGAGTACACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCC
TTACACCGGCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGA
TTGCTGCCTCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAA
ATTGCTGCCAATCTTGTGAAAAATGGTCCCCTTGC
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