CB290592

Overview
NameCB290592
Unique NameCB290592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.634e-28
Identity = 86/276 (31.16%), Postives = 139/276 (50.36%), Query Frame = 2
Query:   74 VKGLVDAGITKVPGIFIRSSEELDRHRQN--SNEPTRTHFRIPVVDLKEVRFQ----RAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVK-YGSNFDLYESSSANWRDTLF-CVMGPEPLDPQELPFVCRDI---TLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLS----NYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            V+ L  +G+  +P  ++R  EEL     N  + E +    ++P +DL+E+  +    R +    + KAA + G   +INHG+  E++  +  A + F ELPVE KE Y + +    V+ YGS      S    W D  F CV      D    P    D    T EY+ Q+  L T +  ++S  LGL+    L  E      L+     N+YP CPQPEL +G   H+D   LT +L + + GLQ+F++++W+    +  + +++IGD L+++SN
Sbjct:   12 VEELARSGLDTIPKDYVRPEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKG-RLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILHNMVPGLQLFYEDKWVTAKCVPNSIIMHIGDTLEILSN 286          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 4.747e-28
Identity = 74/234 (31.62%), Postives = 120/234 (51.28%), Query Frame = 2
Query:  173 TRTHFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEPLDPQ-----ELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLS-NYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            T+    +P++DL      R E    +L+A +E+GFFQV+NHGV+ +V+  M      F  LP   K   YS E ++  +  S           WRD L     P P+D       + P   RD+  +++ Q   +G  L  L+ E +G++ D     + + G+ +L+ N+YP+CP P+  +G   H D + +T+LL   + GL+V ++  WI V P   AFVVN G  L++++N
Sbjct:   29 TKAVVSLPIIDLS---CGRDEVRRSILEAGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGEKYWRDCLRLAC-PFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQAD-YFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLPGAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTN 257          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.057e-27
Identity = 81/256 (31.64%), Postives = 129/256 (50.39%), Query Frame = 2
Query:  119 FIRSSEELDRHRQNSNEPTRTHFRIPVVDLKEVRF----QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTL----FCVMGPEPLDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQ--NQWIDVPPLSGAFVVNIGDLLQLISN 856
            F+R  +E  +   N          IPV+ L  +      +R++    +++A E+ G FQV++HG+  +++  M   AR F  LP E K  +      +K  +  +  L   +  +WR+ +    + +   +     + P   R IT  YS ++  L   L E++SEA+GL+ + L          ++ NYYP CPQP LT+G  +H+DP  +T+LLQD +GGLQ        WI V P+ GAFVVN+GD    +SN
Sbjct:   19 FVRDEDERPKIAYNKFSD-----EIPVISLAGIDDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRF-DMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACVDMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSN 268          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.018e-27
Identity = 78/238 (32.77%), Postives = 118/238 (49.58%), Query Frame = 2
Query:  191 IPVVDLKEVRFQRAEAVSG---VLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTL---FCVMGPEPLDPQEL----------PFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +P++DL+ +    +  +     + +A ++ GFF V+NHG++ E++    E    F ++P+  K+    R+    V Y S+F    S+   W++TL   FC         Q+           PF    +  EY   +  L   + EL+  +LG+K D            +  NYYP C +P+LT+GT  H DP  LTIL QDH+ GLQVF +NQW  + P   AFVVNIGD    +SN
Sbjct:   61 VPLIDLQNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSEKQRVL-RKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQPF--GKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSN 295          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.248e-27
Identity = 82/239 (34.31%), Postives = 123/239 (51.46%), Query Frame = 2
Query:  191 IPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEY--------YSREVNRKVK-YGSNFDLYESSSANWRDTLFCVMGPEPLDPQ------ELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQ--VFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +P++DL++        V  + KA ++ G FQVINHG   E+++  +E  + F  LP E KE++        +   + +K K Y     L       W+DTL    G  PLD        E P   R++  +YS +V KL   + + I E LGLK     N E ++   +L+NYYP CP P  T+G+  H D + +T+L QD + GLQ  +     WI V P+  AFVVN+G  L++I+N
Sbjct:   35 VPIIDLQQ---HHHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTL--AHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGYFDN-ELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQD-LPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITN 266          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.952e-27
Identity = 82/246 (33.33%), Postives = 121/246 (49.19%), Query Frame = 2
Query:  152 RQNSNEPTRTHFR----IPVVDLKEVR-FQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEPLDPQ----ELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQ--NQWIDVPPLSGAFVVNIGDLLQLISN 856
            R     P   H R    +P++ L  +   +RA+    V  A E+ G FQVI+HGV  +++  M   AR F  LP E K  Y      +K  +  +  L   +  +WR+ +     P          E P     +   YS ++  L   L  ++SEA+GL+ + L          ++ N+YP CPQP+LT+G  +H+DP  +T+LLQD +GGLQ        WI V P+SGAFVVN+GD    +SN
Sbjct:   26 RDEDERPKVAHDRFSDAVPLISLHGIDGARRAQIRDRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRY-DMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSN 270          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.578e-26
Identity = 85/266 (31.95%), Postives = 133/266 (50.00%), Query Frame = 2
Query:  107 VPGIFIRSSEELDRHRQNSNEPTRTHFR-----IPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRK--VKYGSNFDLYESSSANWRDTLFC-VMGPEPLD----PQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKG----HCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +P  FIR  +E         +P  T +      IP +DL +    R   V  + +A+ E G FQV NHG+ ++++  +    + F ELP E KE  YSR  + K    YG+          +W D LF  V  P  ++    P+  P   R +  EY+  + ++   LF  +S  LG++   L   E A G    + L  NYYP CP+P+L +G   H+D   LT+L+ + + GLQVF  ++WID   +  A V++IGD ++++SN
Sbjct:   19 IPAEFIRPEKE---------QPASTTYHGPAPEIPTIDLDDPVQDRL--VRSIAEASREWGIFQVTNHGIPSDLICKLQAVGKEFFELPQEEKE-VYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPKNPPSY-RAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVL--KEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSN 269          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.898e-26
Identity = 74/267 (27.72%), Postives = 131/267 (49.06%), Query Frame = 2
Query:   68 AGVKGLVDAGITKVPGIFIRSSEELDRHRQNSNEPTRTHFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYS--REVNRKVKYGSNFD-LYESSSANWRDTLFCVMGPEPLDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLS-NYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            A V  L     + +P  F+  ++ L         P  T   +P++D+   R +  +A+   L + +E GF QV+NHG++  +L  M      F ++P E K E++S  R    K+  GS F+ L E    +  + L+ +   +  D    P + R++   Y+     +   +  L+ E LGL+PD  +  + + G  ++  NYYP  P P  T+G   H D D +T+LL   + GL++ ++  WI V P+  + V+N G  L++++N
Sbjct:    2 AKVMNLTPVHASSIPDSFLLPADRL--------HPATTDVSLPIIDMSRGRDEVRQAI---LDSGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAFETLGEKYWIDVLELLYPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVG-DISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPGAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTN 256          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.912e-25
Identity = 73/250 (29.20%), Postives = 122/250 (48.80%), Query Frame = 2
Query:  152 RQNSNEPTRTHFR-----IPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVK-YGSNFDLYESSSANWRDTLFCVMGPEPLDPQEL----PFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKG-----HCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            R  S +P  T  +     +PV+DL          V  + +A+ E G FQV+NHG+  + +  + +  + F ELP + KE     E  + V+ YG+           W D LF ++ P+           P + R+   EY+  +  +   LFE +S  +GL+      ++ A G     + L  NYYP CP+P+L +G   H+D   +TIL+ + + GLQV   + W DV  +  A +++IGD ++++SN
Sbjct:   25 RSESEQPAVTTMQGVVLQVPVIDLGSSNNTEENLVELIAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKH---ELKKASGGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQGLQVHKDDHWYDVKYIPNALIIHIGDQIEIMSN 271          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.184e-24
Identity = 85/293 (29.01%), Postives = 134/293 (45.73%), Query Frame = 2
Query:   68 AGVKGLVDAGITKVPGIFIRSSEE-------LDRHRQNSNEPTRTHFRIPVVDLKEV------RFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVK-YGSNFDLYESSSANWRDTLFCVMGPEPLDPQEL-PFVCRDI---TLEYSGQVHKLGTLLFELIS---------EALGLKPDCLLNMECAKGHCLLS---NYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            A V+ L  +G++ +P  ++R ++E        D  R ++N+ T    RIPVVD+         + QR E V  V  AA + G   +  HG+  E++  +  A   F  LPV+ KE Y +     +++ YGS           W D LF ++ P+ L    L P    D    T ++  +   L + L  ++S         +AL            A    LL    NYYP CPQPEL +G   H+D   L+ +L + + GLQV H  +W+      G  +V++GD L+++SN
Sbjct:   12 ARVEALSLSGLSAIPPEYVRPADERAGLGDAFDLARTHANDHTAP--RIPVVDISPFLDSSSQQQQRDECVEAVRAAAADWGVMHIAGHGIPAELMDRLRAAGTAFFALPVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGLLGTDRGDALEKALTTTTTRTAADDDLLLQLKINYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSN 302          
The following BLAST results are available for this feature:
BLAST of CB290592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
LDOX_PERFR3.634e-2831.16Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
IDS3_HORVU4.747e-2831.622'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
FL3H_PETCR1.057e-2731.64Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
GAOX1_ARATH4.018e-2732.77Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
HY6H_HYONI5.248e-2734.31Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
FL3H_HORVU8.952e-2733.33Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
FLS_CITUN7.578e-2631.95Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
IDS2_HORVU9.898e-2627.72Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
FLS_PETCR4.912e-2529.20Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
LDOX_MAIZE3.184e-2429.01Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290592 ID=CB290592; Name=CB290592; organism=Citrus sinensis; type=EST; length=857bp
GCACTTAGGTGAAGCTTCTTCCATAAATGAAAGATTTCAAGAACTGAAAG
CCTTTGATGAATCAAAAGCCGGTGTCAAAGGCCTAGTCGATGCTGGCATC
ACCAAGGTTCCAGGAATCTTCATCCGTTCATCAGAGGAGCTTGACAGACA
CCGCCAGAATTCCAACGAACCAACCAGAACCCACTTCAGAATTCCGGTCG
TCGACCTCAAAGAAGTTCGTTTCCAGAGAGCTGAAGCGGTCTCCGGAGTC
CTGAAGGCGGCAGAGGAGGTGGGATTCTTTCAGGTGATCAACCATGGGGT
GGCAACGGAAGTGCTGGTGGGGATGTTGGAGGCGGCGCGTGGCTTTCACG
AGCTTCCGGTGGAGGTCAAAGAGGAGTATTATAGTAGGGAAGTGAATAGG
AAGGTGAAGTATGGGAGTAACTTTGACTTGTATGAATCAAGTTCTGCTAA
TTGGAGGGATACTTTGTTTTGTGTTATGGGTCCTGAGCCTCTTGACCCTC
AGGAACTGCCTTTTGTTTGCAGGGATATTACACTGGAGTACTCTGGGCAA
GTCCATAAATTAGGGACACTGTTGTTTGAACTAATCTCTGAAGCACTTGG
GCTCAAGCCTGACTGCCTCTTGAACATGGAATGTGCAAAAGGGCATTGTC
TTTTGAGTAACTACTACCCAGCATGCCCCCAGCCTGAACTTACTATGGGC
ACTACCAAGCACTCCGACCCTGATTTCCTAACCATCCTTCTTCAAGACCA
TATGGGGGGACTTCAGGTTTTCCATCAAAATCAGTGGATTGATGTTCCTC
CTTTGTCCGGAGCGTTTGTTGTAAATATTGGGGATCTTTTGCAGCTTATA
TCTAATG
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