CB290592

Overview
NameCB290592
Unique NameCB290592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.158e-24
Identity = 77/263 (29.28%), Postives = 120/263 (45.63%), Query Frame = 2
Query:  101 TKVPGIFIRSSEELDRHRQNSNEPTRTHFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEPLDPQELPFVCRD-----------ITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +++P  FI   EE    + + + P      +P +DL   +    EA   + +A  + GFF V+NHGV+  ++         F ++P+  K++   R+      Y S+F    S+   W++TL      +    + +     D           +  +Y   +  L   + EL+  +LG+  D            +  N+YP C  P+LT+GT  H DP  LTIL QDH+ GLQVF  NQW  + P   AFVVNIGD    +SN
Sbjct:   40 SQIPNQFIWPDEE----KPSIDIP---ELNVPFIDLSS-QDSTLEAPRVIAEACTKHGFFLVVNHGVSESLIADAHRLMESFFDMPLAGKQKA-QRKPGESCGYASSFTGRFSTKLPWKETLSFQFSNDNSGSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSN 293          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.158e-24
Identity = 78/269 (29.00%), Postives = 132/269 (49.07%), Query Frame = 2
Query:  107 VPGIFIRSSEELDRHRQNSNEPTRTHF-----RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHE-LPVEVKEEYYSREVNRKVK-YGSNFDLYESSSANWRDTLFCVMGPE--------PLDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKG----HCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +P  +IRS  E         +P  T       ++PV+DL++      + V  +  A++E G FQ+INHG+  E +  + +  + F E +P E KE       +  ++ YG++          W D LF  + P         P +P       R+   EY  ++ ++   +F+ +S  LGL+   ++  E A G    + L  NYYP CP+P+L +G   H+D  ++TIL+ + + GLQVF    W DV  +  A +V+IGD ++++SN
Sbjct:   31 IPSEYIRSENE---------QPAATTLHGVVLQVPVIDLRDP--DENKMVKLIADASKEWGIFQLINHGIPDEAIADLQKVGKEFFEHVPQEEKELIAKTPGSNDIEGYGTSLQKEVEGKKGWVDHLFHKIWPPSAVNYRYWPKNPPSY----REANEEYGKRMREVVDRIFKSLSLGLGLEGHEMI--EAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVPNEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSN 282          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.093e-24
Identity = 78/262 (29.77%), Postives = 132/262 (50.38%), Query Frame = 2
Query:   98 ITKVPGIFIRSSEELDRHRQNSNEPTRTHFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVK-YGSNFDLYESSSANWRDTLF-CVMGPEPLDPQ---ELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKG----HCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            I  +P  +IRS  E    +   +        +PV+DL +      + V  V +A++E G FQV+NHG+  EV+  + E  + F ELP E KE     E ++ ++ YG+           W D LF  +  P  ++ Q   + P   R+   EY+ ++  +   LF+ +S  L L+P+     + A G    + +  NYYP CP+P+L +G   H+D   +T+L+ + + GLQV+    W D   +  A +V+IGD ++++SN
Sbjct:   16 IDTIPAEYIRSENE----QPVISTVHGVVLEVPVIDLSDS--DEKKIVGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFELPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQFWPKNPPAYREANEEYAKRLQLVVDNLFKYLSLGLDLEPNSF--KDGAGGDDLVYLMKINYYPPCPRPDLALGVA-HTDMSAITVLVPNEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSN 268          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.210e-23
Identity = 76/221 (34.39%), Postives = 104/221 (47.06%), Query Frame = 2
Query:  230 AEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEPLDPQEL--PFVCRD----------ITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +EA   V KAA + GFF + NHGV   +L         F + P   K++   R+      Y S+F    SS   W++TL     PE     +    FV +           +  EY+  ++ L   + EL+  +LG++                 NYYP C QPEL +GT  H DP  LTIL QD +GGLQVF  N+W  +PP   AFVVNIGD    ++N
Sbjct:   75 SEATRLVSKAATKHGFFLITNHGVDESLLSRAYLHMDSFFKAPACEKQKA-QRKWGESSGYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQDQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTN 294          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.210e-23
Identity = 75/267 (28.09%), Postives = 131/267 (49.06%), Query Frame = 2
Query:  107 VPGIFIRSSEELDRHRQNSNEPTRTHFR-----IPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARG-FHELPVEVKEEYYSREVNRKVK-YGSNFDLYESSSANWRDTLFCVMGPE--------PLDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKG--HCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +P  +IRS  E         +P  T  +     +PV+D+  V     + V  +++A++E G FQVINHG+  EV+  + +  +  F E+P E KE    +   + ++ YG++          W D LF  + P         P +P       R+   EY+  + K+   +F  +S  LGL+   ++    ++   + L  NYYP CP+P+L +G   H+D  ++T+L+ +    +QVF    W DV  +  A +V+IGD ++++SN
Sbjct:   33 IPSEYIRSENE---------QPAATTLQGVVLEVPVIDISNVDDDEEKLVKEIVEASKEWGIFQVINHGIPDEVIENLQKVGKEFFEEVPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSY----REANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVPNE---VQVFKDGHWYDVNYIPNAIIVHIGDQVEILSN 283          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.580e-23
Identity = 82/272 (30.15%), Postives = 125/272 (45.96%), Query Frame = 2
Query:   92 AGITKVPGIFIRSSEELDRHRQNSNEPTRTHFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTL---FCVMGPEPLDPQELPFVCRDITLE--------YSGQVHKLGTL---LFELISEALGLKPD---CLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +G T++P  FI  +EE      +          + ++D+     +R+  V  V +A E  GFF V+NHG+   +L         F  LP+  K+    R       Y S+F    +S   W++TL   +   G E  +     ++ R +  E        YS   H++  L   L E++ E+LG+  D               +  NYYPAC +P  T+GT  H DP  LTIL QDH+GGL+V+ + +W  + P  GA VVN+GD    +SN
Sbjct:   19 SGQTEIPSQFIWPAEE------SPGSVAVEELEVALIDVG-AGAERSSVVRQVGEACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRA-QRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSN 282          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.064e-23
Identity = 73/243 (30.04%), Postives = 123/243 (50.62%), Query Frame = 2
Query:  170 PTRTHFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYG-SNFDLYESSSANWRDTLFCVMGPEPLDP------QELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKP-DCLLNM--ECAKGHCLLSNYYPACPQPE---LTMGTTKHSDPDFLTILLQDHMGGLQV-FHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            P  T   IPVV+L +      EA + ++KA EE GFF+V+NHGV  E++  + + A GF  LP  +K      E      YG  N  +  +    W + L     P+   P      ++ P + R+   EY  ++ ++   + E+++E LG++P D L  M  +     CL  N+YPA  +     + +G  +H+DP  +++L  ++  GLQ+      W+ VPP   +F +N+GD LQ+++N
Sbjct:   24 PVLTSHSIPVVNLAD-----PEAKTRIVKACEEFGFFKVVNHGVRPELMTRLEQEAIGFFGLPQSLKNRAGPPE-----PYGYGNKRIGPNGDVGWIEYLLLNANPQLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTN 256          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.520e-23
Identity = 81/239 (33.89%), Postives = 111/239 (46.44%), Query Frame = 2
Query:  191 IPVVDLKEVRFQRAE----AVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVK-YGSNFDLYESSSANWRDTL---FCVMGPEP---------LDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +PVVD+  +R   AE    A + V  A    GFFQV  HGV   +    L+ A  F  LP+  K    +R V   V  Y S      +S   W++TL   F      P         L P   P     +  +Y  ++ +L   + EL+  +LG++              +  NYYP CP+PE T+GT  H DP  LTILLQD +GGL+V    +W  V P+ GA V+NIGD    +SN
Sbjct:   63 MPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRR--ARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPM--GRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSN 297          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.520e-23
Identity = 81/239 (33.89%), Postives = 111/239 (46.44%), Query Frame = 2
Query:  191 IPVVDLKEVRFQRAE----AVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVK-YGSNFDLYESSSANWRDTL---FCVMGPEP---------LDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +PVVD+  +R   AE    A + V  A    GFFQV  HGV   +    L+ A  F  LP+  K    +R V   V  Y S      +S   W++TL   F      P         L P   P     +  +Y  ++ +L   + EL+  +LG++              +  NYYP CP+PE T+GT  H DP  LTILLQD +GGL+V    +W  V P+ GA V+NIGD    +SN
Sbjct:   63 MPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRR--ARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPM--GRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSN 297          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.598e-23
Identity = 70/218 (32.11%), Postives = 103/218 (47.25%), Query Frame = 2
Query:  230 AEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLF---CVMGPEPLDPQELPFVCRD------ITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            AE    V +A E  GFFQV+NHG+  E+L         F  +P+  K+    R       Y S+F    +S   W++TL    C   P  +    +  +  D      +   Y  ++ +L   + E++ E+LG+               +  NYYP C +P  T+GT  H DP  LTIL QD++GGLQV  + +W  + P + AFVVNIGD    +SN
Sbjct:   56 AEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRP-GESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSN 272          
The following BLAST results are available for this feature:
BLAST of CB290592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
GAOX2_ARATH4.158e-2429.28Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
FLS_PETHY4.158e-2429.00Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
FLS_EUSGR7.093e-2429.77Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
GAOX3_ARATH1.210e-2334.39Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
FLS_SOLTU1.210e-2328.09Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
GAOX1_ORYSJ1.580e-2330.15Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
G2OX2_ARATH2.064e-2330.04Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
GAOX2_ORYSJ3.520e-2333.89Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI3.520e-2333.89Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
GAO1B_WHEAT4.598e-2332.11Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290592 ID=CB290592; Name=CB290592; organism=Citrus sinensis; type=EST; length=857bp
GCACTTAGGTGAAGCTTCTTCCATAAATGAAAGATTTCAAGAACTGAAAG
CCTTTGATGAATCAAAAGCCGGTGTCAAAGGCCTAGTCGATGCTGGCATC
ACCAAGGTTCCAGGAATCTTCATCCGTTCATCAGAGGAGCTTGACAGACA
CCGCCAGAATTCCAACGAACCAACCAGAACCCACTTCAGAATTCCGGTCG
TCGACCTCAAAGAAGTTCGTTTCCAGAGAGCTGAAGCGGTCTCCGGAGTC
CTGAAGGCGGCAGAGGAGGTGGGATTCTTTCAGGTGATCAACCATGGGGT
GGCAACGGAAGTGCTGGTGGGGATGTTGGAGGCGGCGCGTGGCTTTCACG
AGCTTCCGGTGGAGGTCAAAGAGGAGTATTATAGTAGGGAAGTGAATAGG
AAGGTGAAGTATGGGAGTAACTTTGACTTGTATGAATCAAGTTCTGCTAA
TTGGAGGGATACTTTGTTTTGTGTTATGGGTCCTGAGCCTCTTGACCCTC
AGGAACTGCCTTTTGTTTGCAGGGATATTACACTGGAGTACTCTGGGCAA
GTCCATAAATTAGGGACACTGTTGTTTGAACTAATCTCTGAAGCACTTGG
GCTCAAGCCTGACTGCCTCTTGAACATGGAATGTGCAAAAGGGCATTGTC
TTTTGAGTAACTACTACCCAGCATGCCCCCAGCCTGAACTTACTATGGGC
ACTACCAAGCACTCCGACCCTGATTTCCTAACCATCCTTCTTCAAGACCA
TATGGGGGGACTTCAGGTTTTCCATCAAAATCAGTGGATTGATGTTCCTC
CTTTGTCCGGAGCGTTTGTTGTAAATATTGGGGATCTTTTGCAGCTTATA
TCTAATG
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