CB290592

Overview
NameCB290592
Unique NameCB290592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.598e-23
Identity = 76/268 (28.36%), Postives = 129/268 (48.13%), Query Frame = 2
Query:  107 VPGIFIRSSEELDRHRQNSNEP--TRTH---FRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVK-YGSNF----DLYESSSANWRDTLFCVMGPEPLDPQEL----PFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKG----HCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +P  FIRS  E         +P  T  H     +P++D  +      + +  + +A+   G +Q++NH + +EV+  +    + F ELP E KE Y     +  ++ YG+         +++   W D LF  + P  +   +     P   R+   EY+  +H +   LF L+S  LGL+   L   + A G    + L  NYYP CP+P+L +G   H+D   +TIL+ + + GLQ     +W DV  +  A V++IGD ++++SN
Sbjct:   17 IPAEFIRSENE---------QPGITTVHGKVLEVPIIDFSDP--DEEKLIVQITEASSNWGMYQIVNHDIPSEVISKLQAVGKEFFELPQEEKEAYAKPPDSASIEGYGTKLFKEISEGDTTKKGWVDNLFNKIWPPSVVNYQFWPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQEL--KKAAGGDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVPNDVQGLQACKDGRWYDVKYIPNALVIHIGDQMEIMSN 271          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.005e-23
Identity = 70/218 (32.11%), Postives = 103/218 (47.25%), Query Frame = 2
Query:  230 AEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLF---CVMGPEPLDPQELPFVCRD------ITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            AE    V +A E  GFFQV+NHG+  E+L         F  +P+  K+    R       Y S+F    +S   W++TL    C   P  +    +  +  D      +   Y  ++ +L   + E++ E+LG+               +  NYYP C +P  T+GT  H DP  LTIL QD++GGLQV  + +W  + P + AFVVNIGD    +SN
Sbjct:   56 AEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRAL-RHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSN 272          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.005e-23
Identity = 70/218 (32.11%), Postives = 103/218 (47.25%), Query Frame = 2
Query:  230 AEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLF---CVMGPEPLDPQELPFVCRD------ITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            AE    V +A E  GFFQV+NHG+  E+L         F  +P+  K+    R       Y S+F    +S   W++TL    C   P  +    +  +  D      +   Y  ++ +L   + E++ E+LG+               +  NYYP C +P  T+GT  H DP  LTIL QD++GGLQV  + +W  + P + AFVVNIGD    +SN
Sbjct:   56 AEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRP-GESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSN 272          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.083e-22
Identity = 77/235 (32.77%), Postives = 118/235 (50.21%), Query Frame = 2
Query:  191 IPVVDLKEV----RFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGML-EAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSA------NWRDTLFCVMGPEPLDPQELPFVCRDITLE-YSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLS-NYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +PV+D+  +      +R +    + +A+ E GFFQVINHG++ +VL  M  E  R F E P + K        ++  K+ +    + + SA      +W +  F V   +  D ++  F     T+E ++ +   L  +L E+++E  G +        C +  C L  N YP CP+P    G   H+D DFLTIL QD +GGLQ+   N+WI V P   A ++NIGDL Q  SN
Sbjct:   42 LPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFRE-PFDKK--------SKSEKFSAGSYRWGTPSATSIRQLSWSEA-FHVPMTDISDNKD--FTTLSSTMEKFASESEALAYMLAEVLAEKSG-QNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSN 263          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.132e-21
Identity = 71/232 (30.60%), Postives = 116/232 (50.00%), Query Frame = 2
Query:  188 RIPVVDLKEVRFQRAEAVSG-VLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE--------PLDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            ++PVVDL        E V+  V+KA+E+ G FQV+NHG+ TE++  + +  R F ELP E ++   +RE      YG   +L         D ++    P         P  P +     R++  EY+  V  L   + E +SE LGL  + +  +     + +  N+YP  P  +   G   H+D + LT+++ + + GLQVF  + WI+V  +  A +VNIGD + ++SN
Sbjct:    1 QVPVVDLS---CPDEELVARTVVKASEDWGVFQVVNHGIPTELIQRLQKVGREFFELP-EAEKRSCAREAGSVEGYGRRIELDIKKRKGIVDQIYLSTWPPSSVNYRYWPKSPPDY----REVNEEYARHVKTLSEKIMEWLSEGLGLGREAIKEVNGC-WYVMNINHYPPYPHSDSFNGLEPHTDINGLTLIITNEIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSN 223          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.523e-21
Identity = 68/239 (28.45%), Postives = 126/239 (52.72%), Query Frame = 2
Query:  170 PTRTHFRIPVVDLKEVRFQ-RAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEP--LDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNY------YPACPQPELTMGTTKHSDPDFLTILLQD-HMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            PT T    PV++++ +  + R  A+  +  A E  GFF+++NHG++TE++  + +  +  ++    V+E+ +    ++ +K G + D+ ++   +W  T F    PE    D  +L    R +   ++ ++  L   L +L+ E LGL+   L   +  +G      +      YP CP+P+L  G   H+D   + +L QD  +GGLQ+    +W+DVPP+  + VVN+GD L++I+N
Sbjct:    3 PTST---FPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYK---RVREQRFLEFASKTLKEGCD-DVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLT--KAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITN 232          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.523e-21
Identity = 68/239 (28.45%), Postives = 126/239 (52.72%), Query Frame = 2
Query:  170 PTRTHFRIPVVDLKEVRFQ-RAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEP--LDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLSNY------YPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            PT T    PV++++ +  + R  A+  +  A E  GFF+++NHG++TE++  + +  +  ++    V+E+ +    ++ +K G + D+ ++   +W  T F    PE    D  +L    R +   ++ ++  L   L +L+ E LGL+   L   +  +G      +      YP CP+P+L  G   H+D   + +L QD  +GGLQ+    +W+DVPP+  + VVN+GD L++I+N
Sbjct:    3 PTST---FPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYK---RVREQRFLEFASKTLKEGCD-DVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLT--KAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITN 232          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.303e-21
Identity = 72/231 (31.17%), Postives = 119/231 (51.52%), Query Frame = 2
Query:  194 PVVDLKEVRFQRAEAVSGVLK-AAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEPLDPQ--ELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCL------LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            PV++++ ++  +  A   +L+ A E  GFF+++NHG++ E L+  +EA    H      +E+ +    ++ +    N D     + +W  T F    P     Q  +L   CR    E++ ++ KL   L +L+ E LGL+   L  + C     L      +SNY P CP+P+L  G   H+D   + +L QD  + GLQ+    +WI+VPPL  + VVNIGD L++I+N
Sbjct:    7 PVINMELLQGSQRPAAMALLRDACENWGFFELLNHGISHE-LMNRVEAVNKEHYR--RFREQRFKEFASKTLDSVENVD---PDNLDWESTFFLRHLPTSNISQIPDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNY-PPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITN 230          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.303e-21
Identity = 70/229 (30.57%), Postives = 120/229 (52.40%), Query Frame = 2
Query:  194 PVVDLKEVR-FQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGP--EPLDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLN-MECAKGHCL---LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            P++ L +V   +RA  +  +  A E  GFF+++NHG+  EV+  + +  +G ++   +  E+ +   V  K   G   ++   +  +W  T F    P     +  +L    R++  +++ ++ KL   L +L+ E LGL+   L N    +KG      +SNY P CP+P+L  G   H+D   + +L QD  + GLQ+    QWIDVPP+  + VVN+GD L++I+N
Sbjct:    5 PIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYK---KCMEQRFKELVASKALEGVQAEV---TDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNY-PPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITN 226          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21
Identity = 69/229 (30.13%), Postives = 122/229 (53.28%), Query Frame = 2
Query:  194 PVVDLKEVR-FQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEPLDPQ--ELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLN-MECAKGHCL---LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            P+++L+++   +R   +  +  A E  GFF+++NHG+  EV+  + +  +G ++   +  E+ +   V +K   G   ++   +  +W  T F    P     Q  +L  V R++  ++  ++ KL   L +L+ E LGL+   L N    +KG      +SNY P CP+P+L  G   H+D   + +L QD  + GLQ+    +WIDVPP+  + VVN+GD L++I+N
Sbjct:    5 PIINLEKLNGAERVATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYK---KCMEQRFKELVAKKGLEGVEVEV---TDMDWESTFFLRHLPSSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNY-PPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITN 226          
The following BLAST results are available for this feature:
BLAST of CB290592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
FLS_MALDO4.598e-2328.36Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
GAO1D_WHEAT6.005e-2332.11Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
GAO1A_WHEAT6.005e-2332.11Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
G2OX8_ARATH5.083e-2232.77Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
FLS_MATIN1.132e-2130.60Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
ACCO1_ORYSJ2.523e-2128.451-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSI2.523e-2128.451-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO2_DORSP4.303e-2131.171-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO1_PETHY4.303e-2130.571-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO2_SOLLC7.340e-2130.131-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290592 ID=CB290592; Name=CB290592; organism=Citrus sinensis; type=EST; length=857bp
GCACTTAGGTGAAGCTTCTTCCATAAATGAAAGATTTCAAGAACTGAAAG
CCTTTGATGAATCAAAAGCCGGTGTCAAAGGCCTAGTCGATGCTGGCATC
ACCAAGGTTCCAGGAATCTTCATCCGTTCATCAGAGGAGCTTGACAGACA
CCGCCAGAATTCCAACGAACCAACCAGAACCCACTTCAGAATTCCGGTCG
TCGACCTCAAAGAAGTTCGTTTCCAGAGAGCTGAAGCGGTCTCCGGAGTC
CTGAAGGCGGCAGAGGAGGTGGGATTCTTTCAGGTGATCAACCATGGGGT
GGCAACGGAAGTGCTGGTGGGGATGTTGGAGGCGGCGCGTGGCTTTCACG
AGCTTCCGGTGGAGGTCAAAGAGGAGTATTATAGTAGGGAAGTGAATAGG
AAGGTGAAGTATGGGAGTAACTTTGACTTGTATGAATCAAGTTCTGCTAA
TTGGAGGGATACTTTGTTTTGTGTTATGGGTCCTGAGCCTCTTGACCCTC
AGGAACTGCCTTTTGTTTGCAGGGATATTACACTGGAGTACTCTGGGCAA
GTCCATAAATTAGGGACACTGTTGTTTGAACTAATCTCTGAAGCACTTGG
GCTCAAGCCTGACTGCCTCTTGAACATGGAATGTGCAAAAGGGCATTGTC
TTTTGAGTAACTACTACCCAGCATGCCCCCAGCCTGAACTTACTATGGGC
ACTACCAAGCACTCCGACCCTGATTTCCTAACCATCCTTCTTCAAGACCA
TATGGGGGGACTTCAGGTTTTCCATCAAAATCAGTGGATTGATGTTCCTC
CTTTGTCCGGAGCGTTTGTTGTAAATATTGGGGATCTTTTGCAGCTTATA
TCTAATG
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