CB290592

Overview
NameCB290592
Unique NameCB290592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.252e-20
Identity = 67/230 (29.13%), Postives = 112/230 (48.70%), Query Frame = 2
Query:  191 IPVVDLKEVRF-QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE-PLDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHC-----LLSNYYPACPQPELTMGTTKHSDPDFLTILLQD-HMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            IPV+D  ++   +RAE ++ +    EE GFFQ++NHG+  E+L  + + +   ++L  E  E   S+ V          D     + +W D        E P +P +      +   EY  ++ KL   + E++ E LG +  C+       G          ++YP CP+ +L  G   H+D   + +L QD  +GGLQ+    +WIDV PL+ A V+N GD ++++SN
Sbjct:    3 IPVIDFSKLDGKERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKLREERFEG--SKPVQLLDTLVKEGDGQRLDNVDWEDVFVLQDDNEWPSNPPDF----EETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSN 226          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.252e-20
Identity = 71/229 (31.00%), Postives = 121/229 (52.84%), Query Frame = 2
Query:  194 PVVDLKEVRF-QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEPLDPQ--ELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLN-MECAKGHCL---LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            P+++L+ +   +RA+ +  +  A E  GFF+++NHG+  EV+  + +  +G ++   +  E+ +   V  K   G      E +  +W  T F    P     Q  +L    R++  +++ ++ KL   L +L+ E LGL+   L N    +KG      +SNY P CP+P+L  G   H+D   + +L QD  + GLQ+    QWIDVPP+  + VVN+GD L++I+N
Sbjct:    5 PIINLENLNGDERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYK---KCMEQRFKELVASK---GLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNY-PPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITN 226          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.252e-20
Identity = 71/229 (31.00%), Postives = 121/229 (52.84%), Query Frame = 2
Query:  194 PVVDLKEVRF-QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEPLDPQ--ELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLN-MECAKGHCL---LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            P+++L+++   +RA  +  +  A E  GFF+++NHG+  EV+  + +  +G ++   +  E+ +   V  K   G      E +  +W  T F    P     Q  +L    R++  +++ ++ KL   L +L+ E LGL+   L N    +KG      +SNY P CP+P+L  G   H+D   + +L QD  + GLQ+    QWIDVPP+  + VVN+GD L++I+N
Sbjct:    5 PIINLEKLNGDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYK---KCMEQRFKELVASK---GLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNY-PPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITN 226          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.116e-20
Identity = 68/228 (29.82%), Postives = 119/228 (52.19%), Query Frame = 2
Query:  194 PVVDLKEVR-FQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEP--LDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECA-KGHCLLSNY--YPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            P+++L+++   +RA+ +  +  A E  GFF+++NHG+  EV+  + +  +G ++   +  E+ +   V  K   G      E +  +W  T F    P     +  +L    R++  +++ ++ KL   L +L+ E LGL+   L  +    KG    S    YP CP+P+L  G   H+D   + +L QD  + GLQ+    QWIDVPP+  + VVN+GD L++I+N
Sbjct:    5 PIINLEKLNGSERADTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYK---KCMEQRFKELVASK---GLEAVQAEVTDLDWESTFFLRHLPVSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITN 226          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.116e-20
Identity = 69/229 (30.13%), Postives = 120/229 (52.40%), Query Frame = 2
Query:  194 PVVDLKEVRFQRAEAVSGVLK-AAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEP--LDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLN-MECAKGHCL---LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            P+++L+++     +A   ++K A E  GFF+++NHG+  EV+  + +  +G ++   +  E+ +   V  K   G      E +  +W  T F    P     +  +L    R++  +++ ++ KL   L +L+ E LGL+   L      +KG      +SNY P CP+P+L  G   H+D   + +L QD  + GLQ+    QWIDVPP+  + VVN+GD L++I+N
Sbjct:    5 PIINLEKLNGSERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYK---KCMEQRFKELVASK---GLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNY-PPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITN 226          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.116e-20
Identity = 72/236 (30.51%), Postives = 119/236 (50.42%), Query Frame = 2
Query:  194 PVVDLKEVRFQRAEAVSGVLK-AAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDL-----YESSSANWRDTLFCVMGPEPLDPQ--ELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCL------LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            PV++++ ++  +  A   +L+ A E  G ++++NHG++ E L+  +E           V +E+Y R   ++ K  ++  L      E  + +W  T F    P     Q  +L   CR    E++ ++  L   L +L+ E LGL+   L  + C     L      +SNY P CP+PEL  G   H+D   + +L QD  + GLQ+    +WIDVPP+  + VVNIGD L++I+N
Sbjct:    7 PVINMELLQGSQRPAAMALLRDACENWGLYELLNHGISHE-LMNRVET----------VNKEHYRRFREQRFKEFASKTLDTVENVEPENLDWESTFFLRHLPTSNISQIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNY-PPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITN 230          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.384e-19
Identity = 72/230 (31.30%), Postives = 120/230 (52.17%), Query Frame = 2
Query:  194 PVVDLKEVRFQ-RAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEPLDPQELPFV---CRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMEC-AKGHCL---LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            PVVDL  V  + RA  +  +  A E  GFF+++NHG++TE+L  + +  +  ++   +  E+ +   V  K   G +    E    +W  T F    P   +  E+P +    R    E++ ++ KL   L +L+ E LGL+   L  +   +KG      +SNY P CP+P+L  G   HSD   + +L QD  + GLQ+    +W+DVPP+  + V+N+GD +++I+N
Sbjct:    5 PVVDLSLVNGEERAATLEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYK---KTMEQRFKEMVAAK---GLDDVQSEIHDLDWESTFFLRHLPSS-NISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNY-PPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITN 226          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.384e-19
Identity = 62/228 (27.19%), Postives = 115/228 (50.44%), Query Frame = 2
Query:  194 PVVDLKEVRFQ-RAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEP--LDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLS---NYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            P+++L+++  + RA  +  +  A E  GFF+ +NHG++ E+L  + +  +  ++   +  EE +   +  +   G +    E +  +W  T +    P     D  +L    R +  +++G++ KL   L +L+ E LGL+   L  +             + YP CP P+L  G   H+D   + +L QD  + GLQ+    +W+DVPP+  + VVN+GD L++I+N
Sbjct:    5 PIINLEKLNGEERAITMEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYK---KCMEERFKESIKNR---GLDSLRSEVNDVDWESTFYLKHLPVSNISDVPDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITN 226          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.808e-19
Identity = 69/235 (29.36%), Postives = 123/235 (52.34%), Query Frame = 2
Query:  194 PVVDLKEVRFQ-RAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKY-----GSNFDLYESSSANWRDTLFCVMGPEPLDPQELPFVCRD---ITLEYSGQVHKLGTLLFELISEALGLKPDCLLN-MECAKGHCL---LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            PV+D++++  + RA  +  +  A E  GFF+++NHG++ E++           +    + +E+Y++ + ++ K      G      E +  +W  T F    P   +  E+P + +D      E++ ++ KL   L +L+ E +GL+   L      +KG      +SNY P CP+PEL  G   H+D   + +L QD+ + GLQ+    +WIDVPP+  + V+NIGD L++I+N
Sbjct:    5 PVIDMEKLNGEERAPTMEKIKDACENWGFFELVNHGISHELM-----------DTVERLTKEHYNKCMEQRFKEMVATKGLEAVQSEINDLDWESTFFLRHLPVS-NISEIPDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNY-PPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITN 226          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.084e-19
Identity = 68/221 (30.77%), Postives = 109/221 (49.32%), Query Frame = 2
Query:  224 QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARG-FHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEPLDPQ--ELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCL------LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +R++A++ +  A E  GFF+++NHG++ E         +  + E     +E+ +     + +  G N D     + +W  T F    P     Q  +L   C     E++  + KL   L +L+ E LGL+   L  + C     L      +SNY P CP+PEL  G   H+D   + +L QD  + GLQ+    +WIDVPP+  + VVNIGD L++I+N
Sbjct:    8 RRSDAMAVLRDACENWGFFELLNHGISHEPNEQSETVNKEHYREHYRRFREQRFKEFAAKTLDSGENVD---GDNLDWESTFFLRHLPTSNISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNY-PPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITN 224          
The following BLAST results are available for this feature:
BLAST of CB290592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ACCO_MUSAC1.252e-2029.131-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
ACCO4_SOLLC1.252e-2031.001-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO1_SOLLC1.252e-2031.001-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_TOBAC8.116e-2029.821-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO3_PETHY8.116e-2030.131-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_DORSP8.116e-2030.511-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO1_MALDO1.384e-1931.301-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO1_ARATH1.384e-1927.191-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO_ACTDE1.808e-1929.361-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO_DENCR3.084e-1930.771-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290592 ID=CB290592; Name=CB290592; organism=Citrus sinensis; type=EST; length=857bp
GCACTTAGGTGAAGCTTCTTCCATAAATGAAAGATTTCAAGAACTGAAAG
CCTTTGATGAATCAAAAGCCGGTGTCAAAGGCCTAGTCGATGCTGGCATC
ACCAAGGTTCCAGGAATCTTCATCCGTTCATCAGAGGAGCTTGACAGACA
CCGCCAGAATTCCAACGAACCAACCAGAACCCACTTCAGAATTCCGGTCG
TCGACCTCAAAGAAGTTCGTTTCCAGAGAGCTGAAGCGGTCTCCGGAGTC
CTGAAGGCGGCAGAGGAGGTGGGATTCTTTCAGGTGATCAACCATGGGGT
GGCAACGGAAGTGCTGGTGGGGATGTTGGAGGCGGCGCGTGGCTTTCACG
AGCTTCCGGTGGAGGTCAAAGAGGAGTATTATAGTAGGGAAGTGAATAGG
AAGGTGAAGTATGGGAGTAACTTTGACTTGTATGAATCAAGTTCTGCTAA
TTGGAGGGATACTTTGTTTTGTGTTATGGGTCCTGAGCCTCTTGACCCTC
AGGAACTGCCTTTTGTTTGCAGGGATATTACACTGGAGTACTCTGGGCAA
GTCCATAAATTAGGGACACTGTTGTTTGAACTAATCTCTGAAGCACTTGG
GCTCAAGCCTGACTGCCTCTTGAACATGGAATGTGCAAAAGGGCATTGTC
TTTTGAGTAACTACTACCCAGCATGCCCCCAGCCTGAACTTACTATGGGC
ACTACCAAGCACTCCGACCCTGATTTCCTAACCATCCTTCTTCAAGACCA
TATGGGGGGACTTCAGGTTTTCCATCAAAATCAGTGGATTGATGTTCCTC
CTTTGTCCGGAGCGTTTGTTGTAAATATTGGGGATCTTTTGCAGCTTATA
TCTAATG
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