CB290592

Overview
NameCB290592
Unique NameCB290592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.611e-18
Identity = 68/235 (28.94%), Postives = 119/235 (50.64%), Query Frame = 2
Query:  194 PVVDLKEVRFQ-RAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKY-----GSNFDLYESSSANWRDTLFCVMGPEPLDPQELPFVCRDITL---EYSGQVHKLGTLLFELISEALGLKPDCLLN-MECAKGHCL---LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            PVVD+  +  + RA  +  +  A E  GFF+++NHG++TE+L           +   ++ +++Y + + ++ K      G      E    +W  T F    P   +  E+P +  D      E++ ++ KL   L +L+ E LGL+   L      +KG      +SNY P CP+P+L  G   H+D   + +L QD  + GLQ+    +W+DVPP+  + V+N+GD +++I+N
Sbjct:    5 PVVDMDLINGEERAATLEKINDACENWGFFELVNHGISTELL-----------DTVEKMNKDHYKKTMEQRFKEMVAAKGLEAVQSEIHYLDWESTFFLRHLPSS-NISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNY-PPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITN 226          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.453e-18
Identity = 68/235 (28.94%), Postives = 120/235 (51.06%), Query Frame = 2
Query:  194 PVVDLKEVRFQRAEAVSGVLK-AAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKY-----GSNFDLYESSSANWRDTLFCVMGPEPLDPQELPFV---CRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLN-MECAKGHCL---LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            P+VD+ ++  +  ++   ++K A E  GFF+ +NHG++ E++           +   ++ +E+Y + + ++ K      G      E    +W  T F    P      E+P +    R +  E++ ++ +L   L +L+ E LGL+   L      +KG      +SNY P CP+PEL  G   H+D   + +L QD  + GLQ+   +QWIDVPP+  + V+N+GD L++I+N
Sbjct:    5 PIVDMGKLNTEDRKSTMELIKDACENWGFFECVNHGISIEMM-----------DTVEKLTKEHYKKCMEQRFKEMVATKGLECVQSEIDDLDWESTFFLRHLPVS-SISEIPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNY-PPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITN 226          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.453e-18
Identity = 66/232 (28.45%), Postives = 115/232 (49.57%), Query Frame = 2
Query:  194 PVVDLKEVR----FQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEP--LDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLN-MECAKGHCL---LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            P++D++++      +R+  +  +  A    GFFQV+NH ++ E+   M +  R   E   + +E+ +   V  K    +   +   +  +W  T +    P     +  +L    R +  E++ Q+ +L   L +L+ E LGL+   L N    A G      +SNY P CP+P+L  G   H+D   + +L QD  + GLQ+     W+DVPP+  + VVN+GD L++I+N
Sbjct:    8 PIIDMEKLNNYNGVERSLVLDQIKDACHNWGFFQVVNHSLSHEL---MDKVERMTKEHYKKFREQKFKDMVQTKGLVSAESQV---NDIDWESTFYLRHRPTSNISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNY-PPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITN 232          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.816e-18
Identity = 65/233 (27.90%), Postives = 113/233 (48.50%), Query Frame = 2
Query:  194 PVVDLKEVRFQRAEAVSGVLK-AAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKY-----GSNFDLYESSSANWRDTLFCVMGPEP--LDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHCLLS---NYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            P+++L+ +  +  +A    +K A E  GFF++++HG+ TE L           +    + +E+Y + + ++ K      G      E +  +W  T +    P+    +  +L    R++  E++ ++ KL   L +L+ E LGL+   L                + YP CP PEL  G   H+D   L +L QD  + GLQ+    QWIDVPP+  + V+N+GD L++I+N
Sbjct:    5 PIINLEGLNGEGRKATMEKIKDACENWGFFELVSHGIPTEFL-----------DTVERLTKEHYRQCLEQRFKELVASKGLEAVKTEVNDMDWESTFYLRHLPKSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITN 226          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.692e-17
Identity = 73/241 (30.29%), Postives = 109/241 (45.23%), Query Frame = 2
Query:  191 IPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSN-----------FDLYESSSANWRDTLFCVMGPEPLDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMEC------AKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQ--NQWIDVPPLSGAFVVNIGDLLQLISN 856
            +PVVD+++       A   V  AA++ G F +  HGV  E+L G+  A  G   LP   K     R  +    YGS             + Y  S AN R  L  +    P    +    C  +  E+  ++  L   L EL   ALGL  + +  +E            +  N+YP CP P+  +G   H+D  F T +LQ  + GLQ+F    ++W+ VP + GA VVN+GDL Q+++N
Sbjct:   49 VPVVDMRDPC-----AAEAVALAAQDWGAFLLEGHGVPLELLAGVEAAIGGMFALPASEKMRAVRRPGD-SCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLW---PKAGHDYRHFCA-VMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTN 279          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.210e-17
Identity = 74/241 (30.71%), Postives = 113/241 (46.89%), Query Frame = 2
Query:  191 IPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSN-----------FDLYESSSANWRDTLFCVMGPEPLDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHC------LLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQ--NQWIDVPPLSGAFVVNIGDLLQLISN 856
            +PVVD+++     AEAV     AA++ G F ++ HGV  ++LV +  A  G   LP   K     R  +    YGS             + Y  S AN R  L  +    P    +    C  +  E+  ++  L   L EL   ALGL  + +  +E  +         +  N+YP CP P+  +G   H+D  F T +LQ  + GLQ+F    ++W+ VP + GA VVN+GDL Q+++N
Sbjct:   49 VPVVDMRDPF--AAEAVG---LAAQDWGAFLLVGHGVPLDLLVRVEAAIAGMFALPASEKMRAVRRPGD-SCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLW---PKAGHDYRHFCA-VMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTN 279          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.886e-17
Identity = 71/248 (28.63%), Postives = 123/248 (49.60%), Query Frame = 2
Query:  161 SNEPTRTHFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREV----NRKVKYGSNFDL----YESSSANWRDTLFCVMGPEPLDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLN--MECAKGHCLLS-NYYPACPQ----PELTMGTTKHSDPDFLTILLQDHMGGLQV-FHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            +N P      IP+VDL      + +A + ++KA E+ GFF+VINHG+  + +  +   A  F  LP   KE+          N+++  G N D+    Y   + N +D  F + G E +D        R +  +Y   +  +   + +L++E L ++P  + +  +   +  CL   N+YPACP+     E  +G  +H+DP  ++IL  ++  G Q+      WI VPP   +F +N+GD LQ+++N
Sbjct:   17 NNMPITFSSSIPLVDLS-----KPDAKTLIVKACEDFGFFKVINHGIPLDAISQLESEAFKFFSLPQTEKEKAGPANPFGYGNKRI--GLNGDIGWIEYLLLTTN-QDHNFSLYG-EDIDK------FRGLLKDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQIISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTN 249          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.886e-17
Identity = 64/229 (27.95%), Postives = 117/229 (51.09%), Query Frame = 2
Query:  194 PVVDLKEVRFQ-RAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGP--EPLDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMEC-AKGHCL---LSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            PV+++  +  + R   ++ +  A E  GFF+++NHG++ E++  + +  +  +    +  E+ +   V  K   G +    E +  +W  T F    P     +  +L    + +  E++ ++ KL   + +L+ E LGL+   L  +   +KG      +SNY P CP+PEL  G   H+D   L +L QD  + GL V    +W+DVPP+  + V+N+GD L++I+N
Sbjct:    6 PVINMNNLNGESRVSVLNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYR---KCMEQRFKEMVASK---GLDSVETEINDTDWESTFFLRHLPVSNMSEIGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNY-PPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITN 227          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.430e-17
Identity = 62/236 (26.27%), Postives = 109/236 (46.19%), Query Frame = 2
Query:  191 IPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPEPLDPQEL------PFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNM---ECAKGHCLLSNYYPACPQPELT----MGTTKHSDPDFLTILLQDHMGGLQV-FHQNQWIDVPPLSGAFVVNIGDLLQLISN 856
            IPVVDL        +A + ++ A  + GFF+++NHGV  E++  +   A  F +     K+     +      YGS   +  +    W + L     P+ + P+ L      P   R +   Y   V  +   + EL++E LG++    L+    +     C   N+YP CP+ +      +G  +H+DP  +++L  +   GLQ+      W+ VPP   +F +N+GD LQ+++N
Sbjct:   27 IPVVDLTH-----PDAKNLIVNACRDFGFFKLVNHGVPLELMANLENEALRFFKKSQSEKDRAGPPD---PFGYGSK-RIGPNGDVGWVEYLLLNTNPDVISPKSLCIFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTN 253          
BLAST of CB290592 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.398e-17
Identity = 72/241 (29.88%), Postives = 109/241 (45.23%), Query Frame = 2
Query:  191 IPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSN-----------FDLYESSSANWRDTLFCVMGPEPLDPQELPFVCRDITLEYSGQVHKLGTLLFELISEALGLKPDCLLNMECAKGHC------LLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQ--NQWIDVPPLSGAFVVNIGDLLQLISN 856
            +PVVD+++       A   V  AA++ G F +  HGV  E+L  +  A  G   LP   K     R  +    YGS             + Y  S AN R  L  +    P    +    C  +  E+  ++  L   L EL   ALGL  + +  +E  +         +  N+YP CP P+  +G   H+D  F T +LQ  + GLQ+F    ++W+ VP + GA VVN+GDL Q+++N
Sbjct:   49 VPVVDMRDPC-----AAEAVALAAQDWGAFLLEGHGVPLELLARVEAAIAGMFALPASEKMRAVRRPGD-SCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLW---PKAGHDYRHFCA-VMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTN 279          
The following BLAST results are available for this feature:
BLAST of CB290592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ACCO2_MALDO2.611e-1828.941-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO_PEA4.453e-1828.941-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO_DIACA4.453e-1828.45Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO_PRUMU5.816e-1827.901-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
G3O21_WHEAT1.692e-1730.29Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
G3O23_WHEAT2.210e-1730.71Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
G2OX1_PEA2.886e-1728.63Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum ... [more]
ACCO3_CUCME2.886e-1727.951-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
G2OX_PHACN6.430e-1726.27Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
G3O22_WHEAT8.398e-1729.88Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290592 ID=CB290592; Name=CB290592; organism=Citrus sinensis; type=EST; length=857bp
GCACTTAGGTGAAGCTTCTTCCATAAATGAAAGATTTCAAGAACTGAAAG
CCTTTGATGAATCAAAAGCCGGTGTCAAAGGCCTAGTCGATGCTGGCATC
ACCAAGGTTCCAGGAATCTTCATCCGTTCATCAGAGGAGCTTGACAGACA
CCGCCAGAATTCCAACGAACCAACCAGAACCCACTTCAGAATTCCGGTCG
TCGACCTCAAAGAAGTTCGTTTCCAGAGAGCTGAAGCGGTCTCCGGAGTC
CTGAAGGCGGCAGAGGAGGTGGGATTCTTTCAGGTGATCAACCATGGGGT
GGCAACGGAAGTGCTGGTGGGGATGTTGGAGGCGGCGCGTGGCTTTCACG
AGCTTCCGGTGGAGGTCAAAGAGGAGTATTATAGTAGGGAAGTGAATAGG
AAGGTGAAGTATGGGAGTAACTTTGACTTGTATGAATCAAGTTCTGCTAA
TTGGAGGGATACTTTGTTTTGTGTTATGGGTCCTGAGCCTCTTGACCCTC
AGGAACTGCCTTTTGTTTGCAGGGATATTACACTGGAGTACTCTGGGCAA
GTCCATAAATTAGGGACACTGTTGTTTGAACTAATCTCTGAAGCACTTGG
GCTCAAGCCTGACTGCCTCTTGAACATGGAATGTGCAAAAGGGCATTGTC
TTTTGAGTAACTACTACCCAGCATGCCCCCAGCCTGAACTTACTATGGGC
ACTACCAAGCACTCCGACCCTGATTTCCTAACCATCCTTCTTCAAGACCA
TATGGGGGGACTTCAGGTTTTCCATCAAAATCAGTGGATTGATGTTCCTC
CTTTGTCCGGAGCGTTTGTTGTAAATATTGGGGATCTTTTGCAGCTTATA
TCTAATG
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