CB290594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 71/156 (45.51%), Postives = 103/156 (66.03%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATI----DRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRR+GLLKKA E+SVLCDAEVALI+FS++G+LYEYA +S I +RY A + S T+ N + E KL+ ++ IQ +H++GE L +LN KEL+ LE +LE + +RS+K++++L I ++++E LQ +N Sbjct: 13 NKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGN---WCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEEN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 70/153 (45.75%), Postives = 102/153 (66.67%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRR LLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++ S+ T+++Y+K C S +I TQ QQE KL+ ++ +Q R++LGE L L KEL+ LE +L+ + ++RS + + +L ++ +++RE L N Sbjct: 13 NKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQK-CNFGSPESTIISRETQSSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEAN 164
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.043e-29 Identity = 71/151 (47.02%), Postives = 104/151 (68.87%), Query Frame = 2 Query: 242 NRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPG-SITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T++RY+K + P S EA QQE KL+ + +Q R++LGE L LN KEL++LE +L+ + ++RS + +++L ++ +++E L N Sbjct: 16 NRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNISTREALEISSQQEYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEAN 166
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29 Identity = 72/156 (46.15%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS----VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRRNGLLKKA+E+SVLCDAEVA IVFS +G+LYEYA +S + +RY A + S +E N + E KL+ +I IQ ++H++GE L +LN KEL+ LE +LE + + S+K+ ++L I ++K+E LQ +N Sbjct: 13 NKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKALISAESESEGN---WCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEEN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.324e-29 Identity = 72/155 (46.45%), Postives = 105/155 (67.74%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKA--CADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RGRL+E++ +S + T++RY+ +S + E Y QE KL+ ++ +Q R++LGE L L+ KEL+ LE ++E + +RS KN+ LL ++ ++++E QLQ+ N Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNY-QEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDAN 166
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.324e-29 Identity = 72/155 (46.45%), Postives = 105/155 (67.74%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKA--CADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RGRL+E++ +S + T++RY+ +S + E Y QE KL+ ++ +Q R++LGE L L+ KEL+ LE ++E + +RS KN+ LL ++ ++++E QLQ+ N Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNY-QEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDAN 166
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.324e-29 Identity = 70/161 (43.48%), Postives = 105/161 (65.22%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK--------ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EYAN+S + ++RY++ D ++PGS T E KL+ ++ +Q +H +GE L +LN KEL+NLE +L+ + +RS+KN+++ I ++K++ LQ N Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWT--------LEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.965e-29 Identity = 70/153 (45.75%), Postives = 99/153 (64.71%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++S + T+DRY+K S + + +E KL+ + +Q R++LGE L LN KEL+ LE +L+ + +VRS K + +L ++ ++ +E L N Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.965e-29 Identity = 69/155 (44.52%), Postives = 100/155 (64.52%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEAN--TQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ + S+ T++RY+K + + N Q + E KL+ ++ +Q R++LGE L TL KEL+ LE +L+ + +RS + + +L ++ +++RE L N Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEAN 167
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.965e-29 Identity = 64/152 (42.11%), Postives = 105/152 (69.08%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A+ S + TI+RY+ ++ ++ + + + + +A L +++ ++ R +LGE L + +EL +LE +LE+ + +R +K ++L ++ + ++E++L+ DN Sbjct: 13 NPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTKENIGNKTV-QQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDN 163 The following BLAST results are available for this feature:
BLAST of CB290594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290594 ID=CB290594; Name=CB290594; organism=Citrus sinensis; type=EST; length=696bpback to top |