CB290594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.965e-29 Identity = 61/146 (41.78%), Postives = 103/146 (70.55%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREI 670 N T+RQVTF KRR+GL KKA ELS+LCDAEV L+VFSS RLY++A++S+++ I+RY + D + + + +QQEA LR+Q+ +Q +R +LG+ LS L+ ++L+NLE++LE + +R +K+ +++ +I+ + ++ + Sbjct: 13 NATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKEDPHQTMN-ASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKVV 157
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.154e-28 Identity = 63/156 (40.38%), Postives = 107/156 (68.59%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSS---NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNM 691 ++T+RQVTF KRR GL+KKA EL++LCDAEV LI+FSS G+LY++A++S+++ IDRY K+ + NP S +F+Q+EA LR+++ +Q +R ++GE L+ L+ EL +LE ++E + +R +K ++L EI+ + ++ + +N+ Sbjct: 13 DSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQLLNPAS----EVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENL 164
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28 Identity = 64/155 (41.29%), Postives = 107/155 (69.03%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSS---NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 NT NRQVTF KRR GL+KKA EL++LCDA+V LIVFS GRLY+++++S+++ I+RY++A + NP S +F+Q+E T LR+Q++ + + NR +LGE +S ++L+ L+ ++E + +R+KK+++L EI + ++ +Q +N Sbjct: 13 NTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIERYQEAGEEHCRLLNPMS----EAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKEN 163
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28 Identity = 67/150 (44.67%), Postives = 102/150 (68.00%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQFY----QQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKRE 667 N NRQVTF KRRNGLLKKAYELSVLCDAEVALIVFS+RG+LYE+ + +S+ T++RY+K C + G++T QQE KL+ + +Q R+++GE L L+ K+L+ LE +L+ + ++RS + + +L ++ ++++E Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQK-CNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKE 161
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28 Identity = 64/153 (41.83%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EYAN+S + ++RY++ + + E KL+ ++ +Q +H +GE L +L+ KEL+NLE +L+ + +RS+KN+++ I ++K++ LQ N Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28 Identity = 67/153 (43.79%), Postives = 105/153 (68.63%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+ +++S+ T++RY+K D + + N+Q + E L R+I ++ R ++GE L + +EL+ LE +L++ + ++R+KK ++L E E ++++E L +N Sbjct: 13 NATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHKRND-NSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAEN 164
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28 Identity = 68/156 (43.59%), Postives = 103/156 (66.03%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKK---ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T++RY+K + + P A QQE KL+ + +Q R++LGE L L+ KEL++LE +L+ + ++R+ + + +L ++ ++ +E L N Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETN 168
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28 Identity = 64/154 (41.56%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRRNGLLKKAYELSVLCDAE+AL++FS+RG+LYE+ + + + T+D+Y+K + +P + + Q Q+ KL+ ++ +Q+ RH+LGE LS ++ EL++LE +++ + ++RS K +L ++ ++ +E L N Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPNQ-SAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28 Identity = 66/152 (43.42%), Postives = 103/152 (67.76%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N RQVTF KR++GLLKKAYELSVLCDAEV+LI+FS+ G+LYE++N V TI+RY + C D+ E +TQ +QE TKL+ + + +R+++GE L ++ KEL+ LE +LE + R +K ++++ ++E + ++E +L + N Sbjct: 13 NKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYR-CKDNLLDNDTLE-DTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDIN 162
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 5.725e-28 Identity = 66/156 (42.31%), Postives = 100/156 (64.10%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS----VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRR GLLKKA E+SVLCDAEV+LIVFS +G+L+EY++ S V +RY A P S A T + E ++L+ +I ++ RH LGE L ++ K+L+NLE +LE + +RS+KN+++ + ++++E ++Q +N Sbjct: 13 NKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTN-WSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEEN 167 The following BLAST results are available for this feature:
BLAST of CB290594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290594 ID=CB290594; Name=CB290594; organism=Citrus sinensis; type=EST; length=696bpback to top |