CB290594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28 Identity = 65/153 (42.48%), Postives = 104/153 (67.97%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N +RQVTF KRRNGLLKKAYELS+LCDAEVAL++FS GRLY+++++S + T++RY++ S + + T Q QE L+ + +Q R++LGE L+ L EL+ LE+++ + + ++RS+K ++LL E+ ++++E LQ+ N Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDAN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 68/156 (43.59%), Postives = 102/156 (65.38%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKK---ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T++RY+K + + P A QQE KL+ + +Q R++LGE L L+ KEL+ LE +L+ + ++R+ + + +L ++ ++ +E L N Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETN 168
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 62/156 (39.74%), Postives = 107/156 (68.59%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSS---NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNM 691 ++T+RQVTF KRR GL+KKA EL++LCDAEV LI+FS+ +LY++A++SV++TI+R+ A + NP S +F+Q+EA LR+++ +Q R + G L+ L+ KEL+N+E++LE + +R K+ ++L EI+ + ++ + ++N+ Sbjct: 13 DSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIERFNTAKMEEQELMNPAS----EVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENL 164
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27 Identity = 68/153 (44.44%), Postives = 98/153 (64.05%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRRNGLLKKAYELSVLCDAEV+LIVFS+RG+LYE+ + S + T++RY+K S + + +E KL+ + +Q R++LGE L LN KEL+ LE +L+ + +VR K + +L ++ ++ +E L + N Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDAN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27 Identity = 64/156 (41.03%), Postives = 104/156 (66.67%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQ---FYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ + S+ T+++Y+K C+ + ++ ++ + E KL+ ++ +Q R++LGE L +L KEL++LE +L+ + VR+ + + L+ ++ ++++E + N Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQK-CSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEAN 167
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27 Identity = 64/156 (41.03%), Postives = 104/156 (66.67%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQ---FYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ + S+ T+++Y+K C+ + ++ ++ + E KL+ ++ +Q R++LGE L +L KEL++LE +L+ + VR+ + + L+ ++ ++++E + N Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQK-CSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEAN 167
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27 Identity = 68/161 (42.24%), Postives = 102/161 (63.35%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK--------ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EYA +S + ++RY++ D ++PGS T N KL+ ++ +Q + +GE L +LN KEL+NLE +L + +RS+KN+++ I ++K++ LQ N Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLEN--------AKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27 Identity = 63/153 (41.18%), Postives = 101/153 (66.01%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFSS+G+L+EY+ +S + ++RY + + ++ + E KL+ ++ ++ R+ +GE L +L+ KEL++LE +L+ I +RS+KN+ + I ++K++ LQ+ N Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27 Identity = 64/154 (41.56%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK-ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS +G+L+EY+ +S + ++RY++ + A+ ++ NT + E +L+ +I ++ RH LGE L ++ KEL+NLE +L+ + +R++KN+++ I ++K+E +Q N Sbjct: 13 NKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.330e-27 Identity = 64/154 (41.56%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK-ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS +G+L+EY+ +S + ++RY++ + A+ ++ NT + E +L+ +I ++ RH LGE L ++ KEL+NLE +L+ + +RS+KN+++ I ++++E +Q N Sbjct: 13 NKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQN 165 The following BLAST results are available for this feature:
BLAST of CB290594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290594 ID=CB290594; Name=CB290594; organism=Citrus sinensis; type=EST; length=696bpback to top |