CB290594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26 Identity = 61/153 (39.87%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N NRQVTF KRR+GLLKKA+E+SVLCDAEVAL++FSS+G+L+EY+ +S + ++RY + + ++ + E KL+ ++ ++ R+ +GE L +L+ KEL++LE +L I +RS+KN+ + I ++K++ LQ+ N Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24 Identity = 66/158 (41.77%), Postives = 102/158 (64.56%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKA---CADSSNPGSITEANTQFYQQEATKLRRQIREIQ-NLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N T+RQVTF KRR+GL+KK +ELSVLCDA++ LIVFS++G+L EY S++ IDRY KA + N N Q +E T+++ + +Q NL R+ G+ LST+ F+EL LE L++ + +VR++K E+L ++E +++ E L+ +N Sbjct: 13 NNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVI-KELTRMKEETLNLQLNLQRY-KGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKEN 168
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24 Identity = 62/155 (40.00%), Postives = 98/155 (63.23%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIE--FMEKREIQLQNDNM 691 N +RQVTF KRR GLLKKA+ELSVLCDAEVA+IVFS G+L+E+++ S++ T+ RY S PG + Q E L+ +I +Q + H+ G+ L+ L+ KEL++LE +L + VR +K +L ++E ++++ +L+N+ + Sbjct: 13 NANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTSMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQRAELENETL 167
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24 Identity = 62/155 (40.00%), Postives = 98/155 (63.23%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLN---RHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N T RQVTF KRR GL KKA ELSVLCDA+VALI+FSS G+L+E+ ++S++ ++R+ S N + + + + E + R +EI + + R + GE L L+ +EL+ LE LE G+ RV K++ +++EI ++K+ +QL ++N Sbjct: 13 NATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLERHN---LQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDEN 164
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.117e-23 Identity = 61/154 (39.61%), Postives = 95/154 (61.69%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N T+RQVTF KRR GLLKK +ELSVLCDA++ LI+FSS+G+L+EY + +S+ I RY + S + + Q Y E K+RR +Q + G+ LS ++EL LE +LE + ++R++K E++ ++E ++K E L+ +N Sbjct: 16 NKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASL---PVEDNRVQLY-DEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKEN 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.906e-23 Identity = 60/155 (38.71%), Postives = 90/155 (58.06%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYK--KACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNM 691 N RQVTF KRR GL KKA ELS+LCDAEV L+VFS+ G+L+++A+ S+ IDRY + P + +L+ ++ E R + GE L LN ++L+ LE LE G+G V K++ +L EI+ +E++ +QL +N+ Sbjct: 32 NLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRYNSHSKTLQRAEPSQLDLQGED--SSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENL 184
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.906e-23 Identity = 61/155 (39.35%), Postives = 97/155 (62.58%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQE---ATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N+T RQVTF KRR GL KKA ELSVLCDA+VALI+FSS G+L++Y+++S++ ++R S N + + + + E ++L ++I E + R + GE L LN +EL+ LE LE G+ RV +K + ++ EI ++++ + L +N Sbjct: 13 NSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILERRD---LHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEEN 164
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.242e-23 Identity = 58/151 (38.41%), Postives = 97/151 (64.24%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNE---MLLAEIEFMEKREIQL 676 N++NRQVT+ KRRNG+LKKA E+SVLCDA V++I+F+S G+++E+++ S+ +D+Y K + +A + E K+++ +Q RH+ GE +++LN +EL LE LE G+ +R+K+NE M+ + + ME+ + QL Sbjct: 13 NSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHKLTG-----RRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQNEVLRMMRKKTQSMEEEQDQL 158
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.242e-23 Identity = 60/155 (38.71%), Postives = 97/155 (62.58%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIE--FMEKREIQLQNDNM 691 N +RQVTF KRR+GLLKKA ELSVLCDAEVA+IVFS G+L+EY++ ++ T+ RY N S + + + E L+ Q+ ++Q + + G+ L+ L FKEL++LE +L + VR +K +L ++E ++++ +L+N+ + Sbjct: 13 NANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLSRY-------GNHQSSSASKAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETL 160
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23 Identity = 62/162 (38.27%), Postives = 91/162 (56.17%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSSNPGSITEANTQFYQ-------QEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMY 694 N +RQVTFCKRR GLLKKA ELSVLCDAE+ +++FS +G+L+E A ++ ID+Y K S T + Q E L+++I +Q ++ G +N +EL LE LE I ++RS K +++L EI+ + +E L+N N Y Sbjct: 13 NPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKY 174 The following BLAST results are available for this feature:
BLAST of CB290594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290594 ID=CB290594; Name=CB290594; organism=Citrus sinensis; type=EST; length=696bpback to top |