CB290594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 56/156 (35.90%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMY 694 N+TNRQVTF KRR GLLKKA EL+VLCDA V +++FSS G+++EY + S+R I++Y+ A +N + Q E T+++ ++ +++ R G+ LS+L ++ +LE +LE + +VR++K+++L +++ + ++E L++ N + Sbjct: 13 NSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHA----TNSHFEEINHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTF 164
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.752e-22 Identity = 62/151 (41.06%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 245 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEA--TKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNM 691 RQVTF KRR GL KKA ELSVLCDA+VALIVFSS G+L +A++S+ ID+Y S+N G + + + + L Q+ E R + GE L L+ EL+ LE LE G+ RV K++ + +I ++++ QL +NM Sbjct: 17 RQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIIDKYN---THSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENM 164
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.594e-22 Identity = 56/151 (37.09%), Postives = 97/151 (64.24%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNE---MLLAEIEFMEKREIQL 676 N++NRQVT+ KRRNG+LKKA E+SVLCDA V++I+F+S G+++E+++ S+ +D+Y K + +A + E K+++ +Q RH+ GE +++LN +EL LE L+ G+ +R+K+N+ M+ + + ME+ + QL Sbjct: 13 NSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHKLTG-----RRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQNDLLRMMRKKTQSMEEEQDQL 158
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 58/164 (35.37%), Postives = 97/164 (59.15%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKACADSSNPGSITEANTQFYQ--------QEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMY 694 N TNRQVTF KRR GLLKKA EL+VLCDA V +++FSS G+++EY + S+R I+ Y+ T NT F + E T++R ++ ++ R G+ LS L ++ +LE +LE + +VR++K+++L +++ + ++E L++ N + Sbjct: 13 NATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQ------------TVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSF 164
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 62/154 (40.26%), Postives = 90/154 (58.44%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSS-NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N +RQVTFCKRR GLLKKA ELSVLCDA+V +I+FSS+G+L+E A N ++ ++RY+ A PG++ Q +Q LR +I +Q R G + +L LE LE I ++R+ K +M+ EI+F+ +E L+ N Sbjct: 13 NPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGAL--QRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEAN 164
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 63/171 (36.84%), Postives = 93/171 (54.39%), Query Frame = 2 Query: 245 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY---KKACADSSNPGSI-----------TEANTQFY--------QQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNM 691 RQVTF KRR GL KKA EL+VLCDA+VAL+VFSS G+L ++A++++ ID+Y K + SI T N+ Y + + L Q+ E R + GE L L+ +EL+ +E LE G+ RV K++ + EI ++++ IQL +NM Sbjct: 17 RQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENM 187
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 59/154 (38.31%), Postives = 94/154 (61.04%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILG-EALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N +RQVTFCKRR GLLKKA ELS+LC+A++ +I+FS+ G+LY+ A ++ I+RYK A + +N + +QEA L+++I +Q R+I G A + +EL LE LE + +RS K ++++ EI+ ++ +E L+ N Sbjct: 13 NPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMDP---KQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAAN 163
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 59/154 (38.31%), Postives = 94/154 (61.04%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILG-EALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N +RQVTFCKRR GLLKKA ELS+LC+A++ +I+FS+ G+LY+ A ++ I+RYK A + +N + +QEA L+++I +Q R+I G A + +EL LE LE + +RS K ++++ EI+ ++ +E L+ N Sbjct: 13 NPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMDP---KQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAAN 163
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.738e-20 Identity = 55/146 (37.67%), Postives = 89/146 (60.96%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRAT--IDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKR 664 N TNRQVTF KRR GLLKKA EL++LCDA++ +IVFS G++YEY++ R DRY KA + + Q QE T+++ + ++ + R +G+ L++L +++ NLE ++E + +VR +K ++L ++ M R Sbjct: 13 NPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLKAPSTRFEEMDV----QQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQLLEMHSR 154
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20 Identity = 53/154 (34.42%), Postives = 90/154 (58.44%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRAT--IDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N++NRQVT+ KRRNG++KKA E+SVLCDA V++I+F+S G+++E+ + S +D Y K + + + E +++++ +Q RH+ GE ++TLN+KEL LE LE G +++K+ E + M K ++ +N Sbjct: 13 NSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLSGK-----RLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEF----VRMMRKHNEMVEEEN 157 The following BLAST results are available for this feature:
BLAST of CB290594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290594 ID=CB290594; Name=CB290594; organism=Citrus sinensis; type=EST; length=696bpback to top |