CB290594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19 Identity = 53/157 (33.76%), Postives = 97/157 (61.78%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKACADSSNPGSITEANTQFYQQEAT------KLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQ 679 N +RQVTF KRR GLLKKA+E++VLCD +VA IVFS++G L+ YA++ ++ +++Y + S I E F + E + KLR +I ++ R+++G+ L +L ++++ LE +++ + +RS+K ++L+ + +EK+ +L+ Sbjct: 13 NEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHELLSEGNNVIEE----FPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELE 165
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19 Identity = 53/140 (37.86%), Postives = 91/140 (65.00%), Query Frame = 2 Query: 275 GLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 GLLKKA EL++LCDA++ +I+FSS G+++E+++ S+R IDRY+K S N + + N Q Y E T+++ +I ++Q RH GE L++L E+ LE +LE + +VRS+K ++L +++ + ++E L+ N Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQKL---SGNCAPVYD-NQQVYC-EITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQN 136
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-19 Identity = 54/154 (35.06%), Postives = 95/154 (61.69%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRA--TIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNE---MLLAEIEFMEKREIQLQ 679 N++NRQVT+ KRRNG++KKA E++VLCDA+V+LI+F + G+++EY + S +D Y+K ++ + +A + E +++++ +Q RH+ GE +++LN KEL LE L G+ + +K++E M+ + +E+ QLQ Sbjct: 13 NSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQK-----TSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQSEILRMVRKNDQILEEEHKQLQ 161
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19 Identity = 59/166 (35.54%), Postives = 96/166 (57.83%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA--NNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVR---------SKKNEMLLAEIEFMEKREI--QLQNDNM 691 N NR VTF KRRNGL+KKA E++VLCDA+VALI+F+S G++ +Y + + A +D+Y+K + +A + E +++++ +Q RH+ GE + +LN K L +E +E G+ +VR ++NE ++AE E+R++ QLQ M Sbjct: 13 NANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGK-----KLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEILISKRRNEKMMAE----EQRQLTFQLQQQEM 169
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19 Identity = 52/153 (33.99%), Postives = 90/153 (58.82%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS--VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHI-------LGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKR 664 N TNRQVT+ KRR G++KKA EL+VLCDA+VA+I+FSS G+ +E+ + S ++ DRY++A T + ++ ++R + ++++NR++ +GE L L F EL+ LE ++ + VR +K ++ + E +K+ Sbjct: 13 NATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQA------------IGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKK 153
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 51/153 (33.33%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV--RATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHI-------LGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKR 664 N TNRQVT+ KRRNGL KKA EL+VLCDA+V++I+ SS G+L+E+ + S+ + D Y+K + K++ Q+R+++ +NR++ +GE+L+ LN+++L+ L ++ + +R +K +++ +IE +K+ Sbjct: 13 NQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKT------------VGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKK 153
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 60/155 (38.71%), Postives = 89/155 (57.42%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--ANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHI---LGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQN 682 N TNRQVT+ KRRNGL KKA+EL+VLCDA V++I+FSS +L+EY N + + +D Y+ + TQ+ + + TK R+ + +NL I LGE L L+ +EL+ LE +E VR +K + L +IE +K+ Q+ Sbjct: 13 NQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTI-------SDVDVWATQYERMQETK-RKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQD 159
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.345e-19 Identity = 58/155 (37.42%), Postives = 94/155 (60.65%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSIT-EANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N+TNRQVTF KRR+G+LKKA E+SVLCDAEV +++FSS G+LY+Y + S+ +++Y+ +N G I + + E +++++ +Q RH+ GE L++L KEL +E L+ GI V N+ L+ E + + L+++N Sbjct: 13 NSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQ------TNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNV----NDKLMDHWERHVRTDKMLEDEN 157
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 58/156 (37.18%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSITEANTQFYQ--QEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N T RQVTF KRR GL+KK ELS+LCDA + LIVFS+ G+L E+ + N + IDRY +N + + + Q E LRR+ ++ R G L+++ EL LE +LE + +VR +KNE++ ++E + ++ L+ DN Sbjct: 13 NQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYL-----HTNGLRLPDHHDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDN 163
BLAST of CB290594 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 52/153 (33.99%), Postives = 90/153 (58.82%), Query Frame = 2 Query: 233 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN-NSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDN 688 N ++RQVTF KRRNGL++KA +LSVLCDA VAL+V S+ G+LY +++ +++ +DRY K AD + +Q +A ++ ++ ++G + ++ L LE LE + R+KK E++L +E ++++E L+ +N Sbjct: 13 NKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHAD--------DLKALDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEEN 157 The following BLAST results are available for this feature:
BLAST of CB290594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290594 ID=CB290594; Name=CB290594; organism=Citrus sinensis; type=EST; length=696bpback to top |