CB290597
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290597 vs. ExPASy Swiss-Prot
Match: ZIP6_ARATH (Zinc transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ZIP6 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.446e-37 Identity = 94/237 (39.66%), Postives = 127/237 (53.59%), Query Frame = 2 Query: 143 RDKTQALKYKLAAIASILVAGAIGVYLPVL-GKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTS-PCLDEHPWADFPFTGFAAMVAAIGTLMIDAFATSYATSYYRKSHFGEAEDNVSDEEKVGEXXXXXXXXXXXXXXXXXXSIEYAGESELLRHRVISLVLELGILVHSVIIGISLGTSESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFS 847 RD +A K+ A+ +I + GV+ PVL K K +IK FAAGVILST VHVLP+AFE+L HPW DFPF G M+ AI L++D A S + G D + VG+ E ++ R++S VLE+GI+ HSVIIG+++G S++ TI+PL+AAL+FHQ FEG+GLGGCI QA FK+ V + L F+ Sbjct: 18 RDGEEASHLKIVAVFAIFLTSVFGVWGPVLLAKYFHGKPLYDKAILVIKCFAAGVILSTSLVHVLPEAFESLADCQVSSRHPWKDFPFAGLVTMIGAITALLVDLTA-----SEHMGHGGGGGGDGGMEYMPVGKAVGGLEMKEGKCGADLEIQENSEEEIVKMKQRLVSQVLEIGIIFHSVIIGVTMGMSQNKCTIRPLIAALSFHQIFEGLGLGGCIAQAGFKAGTVVYMCLMFA 249
BLAST of CB290597 vs. ExPASy Swiss-Prot
Match: ZIP9_ARATH (Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.712e-30 Identity = 92/262 (35.11%), Postives = 127/262 (48.47%), Query Frame = 2 Query: 182 IASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPW-------------------ADFPFTGFAAM---------VAAIGTLMIDAFATSYATSYYRKSHFG----------EAEDNVSDEEKVGEXXXXXXXXXXXXXXXXXXSIEYA--GESELLRHRVISLVLELGILVHSVIIGISLGTSESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFS 847 +ASIL++GA GV +P++G +P + KAFAAGVIL+TGFVH+L + L+ PCL E PW ADF TG+ V ++GT + + + R G AE + E S + G +RH V+S +LE+GI+ HS+IIGISLG S SP TI+PL+ AL+FHQFFEG LGGC+ +A+ RG A++A FF+ Sbjct: 1 MASILISGAAGVSIPLVGTLLPL---NGGLMRGAKAFAAGVILATGFVHMLSGGSKALSDPCLPEFPWKMFPFPEFFAMVAALLTLLADFMITGYYERKQEKMMNQSVESLGTQVSVMSDPGLESGFLRDQEDGGALHIVGMRAHAEHHRHSLSMGAEGFEALSKRSGVSGHGHGHSHGHGDVGLDSGVRHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPLLLALSFHQFFEGFALGGCVAEARLTPRGSAMMAFFFA 259
BLAST of CB290597 vs. ExPASy Swiss-Prot
Match: IRT3_ARATH (Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 6.302e-25 Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 2 Query: 116 CTCDPEDDDRDKTQALKYKLAAIASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFTGFAAMVAAIGTLMIDAFATSYATSYYRKSHFGEAEDNV 517 C D RD + A K AIASIL+AGA GV +P++G+ L + +F KAFAAGVIL+TGFVH+L E L +PCL + PW+ FPF GF AM+AA+ TL +D T YY + EA ++V Sbjct: 10 CNASESDLCRDDSAAFLLKFVAIASILLAGAAGVTIPLIGRNRRFLQTDGNLFVTAKAFAAGVILATGFVHMLAGGTEALKNPCLPDFPWSKFPFPGFFAMIAALITLFVDFM----GTQYYERKQEREASESV 139 HSP 2 Score: 103.605 bits (257), Expect = 1.453e-21 Identity = 47/73 (64.38%), Postives = 62/73 (84.93%), Query Frame = 2 Query: 629 RHRVISLVLELGILVHSVIIGISLGTSESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFS 847 RH V+S VLELGI+ HS+IIG+SLG S+SP TI+PL+AAL+FHQFFEG LGGCI+QA+F+++ I+A FF+ Sbjct: 232 RHIVVSQVLELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFRNKSATIMACFFA 304 The following BLAST results are available for this feature:
BLAST of CB290597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290597 ID=CB290597; Name=CB290597; organism=Citrus sinensis; type=EST; length=849bpback to top |