CB290630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_RICRO (ATP synthase subunit beta OS=Rickettsia rickettsii (strain Iowa) GN=atpD PE=3 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.648e-56 Identity = 113/169 (66.86%), Postives = 135/169 (79.88%), Query Frame = 2 Query: 296 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 IG++ Q+I AVVDV+F LP IL ALE + + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKA Sbjct: 5 IGKITQIISAVVDVKFTNNGKLPEILNALECYNDTRRVVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKA 173
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_RICPR (ATP synthase subunit beta OS=Rickettsia prowazekii GN=atpD PE=3 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.648e-56 Identity = 113/169 (66.86%), Postives = 135/169 (79.88%), Query Frame = 2 Query: 296 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 IG++ QVI AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGL+RG V++TG+PI +PVG TLGRIMNV+GEPID KG++K+ I++ AP F+ Q+TE+ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKA Sbjct: 5 IGKITQVISAVVDVKFTNNGKLPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLIRGLEVIDTGNPIRIPVGTETLGRIMNVVGEPIDGKGEIKSATISSIYKPAPDFINQSTERDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKA 173
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_RICAE (ATP synthase subunit beta OS=Rickettsia africae (strain ESF-5) GN=atpD PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.648e-56 Identity = 113/169 (66.86%), Postives = 134/169 (79.29%), Query Frame = 2 Query: 296 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKA Sbjct: 5 IGKITQIISAVVDVKFTNNGELPEILNALECYNDKHRIVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKA 173
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_CAUCR (ATP synthase subunit beta OS=Caulobacter crescentus GN=atpD PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 2.153e-56 Identity = 110/172 (63.95%), Postives = 135/172 (78.49%), Query Frame = 2 Query: 287 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 +GA G++ Q+IGAVVD+ FD LP IL A+E V+ + RLV EVAQH+G+ VR IAMD TEGLVRGQ V +TG PI VPVG TLGRIMNVIGEPIDE+G ++++ IHR+AP+F EQ ++LVTGIKV+DL+ PY +GGKIGLFGGAGVGKTV + ELINN+AKA Sbjct: 61 EGATGRLVQIIGAVVDIEFDGALPAILNAVETVNTATGQRLVFEVAQHLGQSTVRAIAMDATEGLVRGQPVRDTGEPIRVPVGPGTLGRIMNVIGEPIDEQGPIRSDISRTIHRDAPSFAEQTNTAEVLVTGIKVIDLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKA 232
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSM (ATP synthase subunit beta OS=Geobacter sp. (strain M21) GN=atpD PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.812e-56 Identity = 115/171 (67.25%), Postives = 132/171 (77.19%), Query Frame = 2 Query: 299 GQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ+V + G I+VPVG+ TLGRI+NVIGEP+DE G + E IHREAPAFV Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINN+AK Sbjct: 6 GKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVRTIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIGNEKEYGIHREAPAFVNQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAK 176
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_RICCN (ATP synthase subunit beta OS=Rickettsia conorii GN=atpD PE=3 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 3.672e-56 Identity = 113/169 (66.86%), Postives = 133/169 (78.70%), Query Frame = 2 Query: 296 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKA Sbjct: 5 IGKITQIISAVVDVKFTNNGELPKILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTHQSTECNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKA 173
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_DESVM (ATP synthase subunit beta OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=atpD PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.796e-56 Identity = 109/171 (63.74%), Postives = 137/171 (80.12%), Query Frame = 2 Query: 296 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 IG++ QVIGAVVDV F G LP IL+AL++ + + +LV EVAQH+G+ VVRTIAMD TEGLVRG ++TG PI VPVG+ +LGRIMNV+G P+DE G +KT+ YLPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV++ME+INN+AK Sbjct: 5 IGKIVQVIGAVVDVEFPSGNLPNILSALDIKNPNNSDAPQLVCEVAQHLGDNVVRTIAMDATEGLVRGMEAVDTGKPIMVPVGKASLGRIMNVVGRPVDEMGPIKTDKYLPIHRPAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAK 175
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_RICBR (ATP synthase subunit beta OS=Rickettsia bellii (strain RML369-C) GN=atpD PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.068e-55 Identity = 112/172 (65.12%), Postives = 136/172 (79.07%), Query Frame = 2 Query: 287 KGAIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 K IG++ Q+I AVVDV+F LP IL ALE + R+VLE+AQH+G+ VR IAM+ TEGLVRG V++TGSPI++PVG TLGRIMNV+GEPID KG +K I++ AP+F +Q+T++ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKA Sbjct: 2 KKNIGKITQIISAVVDVKFTNKGKLPQILNALECYNDKQRIVLEIAQHIGDDTVRCIAMNSTEGLVRGMEVVDTGSPISIPVGIETLGRIMNVVGEPIDGKGKIKGSSISSIYKSAPSFTQQSTDRNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKA 173
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_RICB8 (ATP synthase subunit beta OS=Rickettsia bellii (strain OSU 85-389) GN=atpD PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.068e-55 Identity = 112/172 (65.12%), Postives = 136/172 (79.07%), Query Frame = 2 Query: 287 KGAIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 K IG++ Q+I AVVDV+F LP IL ALE + R+VLE+AQH+G+ VR IAM+ TEGLVRG V++TGSPI++PVG TLGRIMNV+GEPID KG +K I++ AP+F +Q+T++ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKA Sbjct: 2 KKNIGKITQIISAVVDVKFTNKGKLPQILNALECYNDKQRIVLEIAQHIGDDTVRCIAMNSTEGLVRGMEVVDTGSPISIPVGIETLGRIMNVVGEPIDGKGKIKGSSISSIYKSAPSFTQQSTDRNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKA 173
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_GEOBB (ATP synthase subunit beta OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=atpD PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.068e-55 Identity = 114/171 (66.67%), Postives = 131/171 (76.61%), Query Frame = 2 Query: 299 GQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ+V + G I+VPVG+ TLGRI+NVIGEP+DE G + E IHREAP FV Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINN+AK Sbjct: 6 GKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVRTIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIGNEKEYGIHREAPLFVNQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAK 176 The following BLAST results are available for this feature:
BLAST of CB290630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290630 ID=CB290630; Name=CB290630; organism=Citrus sinensis; type=EST; length=798bpback to top |