CB290639
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290639 vs. ExPASy Swiss-Prot
Match: VATL2_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Schizosaccharomyces pombe GN=vma11 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19 Identity = 49/122 (40.16%), Postives = 77/122 (63.11%), Query Frame = -3 Query: 340 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 705 +G G+A++G RPE+VMKS++PVVM+G++G+YGL+++V+I+ ++P Y LF G+ G AIG+VGD GV++ +Q ++FV M LYGLIVG+IL ++ Sbjct: 36 AGRGIAAVGAFRPEIVMKSLIPVVMSGIIGVYGLVMSVLIAGDMSPD-NDYSLFSGFIHLSAGLAVGLTGVAAGYAIGVVGDRGVQSFMRQDRIFVSMVLILIFAEVLGLYGLIVGLILQTK 156
BLAST of CB290639 vs. ExPASy Swiss-Prot
Match: VATL_ENTHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Entamoeba histolytica GN=VMA3 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 53/126 (42.06%), Postives = 72/126 (57.14%), Query Frame = -3 Query: 328 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQS 705 S VG++S+GVM+PE +++S+ PVV AG++G+YGLI+ +++ IN Y L + GMAIGI GD GVR AQQPKLFVGM LYG IV +I++S S Sbjct: 44 SSVGISSVGVMKPEFIVRSVAPVVFAGIIGLYGLIVCILLF--INVTKSEYSLNRAFLDLGAGLTCGLCGLASGMAIGISGDCGVRGAAQQPKLFVGMLICLIFSEALALYGFIVALIMASTGENS 167
BLAST of CB290639 vs. ExPASy Swiss-Prot
Match: VATL2_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Neurospora crassa GN=vma-11 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 8.567e-19 Identity = 48/125 (38.40%), Postives = 75/125 (60.00%), Query Frame = -3 Query: 337 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINP--KAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRA 705 SG+G+A +G RP+L+MK ++PVVM+G++ +Y L++AV+I+ + P + Y LF+G+ G IGIVGD GVR+ Q ++FVGM LYGLIV +IL++++ Sbjct: 41 SGIGIAGVGTFRPDLIMKCLIPVVMSGIIAVYALVVAVLIAQDLGPPGSGQHYSLFNGFMHLACGLSVGLTGLAAGYCIGIVGDKGVRSFMLQSRIFVGMVLILIFGEVLGLYGLIVALILNTKS 165
BLAST of CB290639 vs. ExPASy Swiss-Prot
Match: VATL_ENTDI (V-type proton ATPase 16 kDa proteolipid subunit OS=Entamoeba dispar GN=VMA3 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18 Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = -3 Query: 328 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQS 705 S VG++S+GVM+PE +M+S+ PVV AGV+G+YGLI+ +++ IN Y L + GM+IGI GD GVR AQQPKLFV M LYG IV +I+++ S Sbjct: 42 SSVGISSVGVMKPEFIMRSLFPVVFAGVIGLYGLIVCIVLF--INVNKSEYSLNRAFLDLGAGLTCGLCGLASGMSIGISGDCGVRGAAQQPKLFVSMLICLIFSEALALYGFIVALIMAATGDNS 165 The following BLAST results are available for this feature:
BLAST of CB290639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290639 ID=CB290639; Name=CB290639; organism=Citrus sinensis; type=EST; length=707bpback to top |