CB290649

Overview
NameCB290649
Unique NameCB290649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSJ (Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CAM1-1 PE=1 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 4.140e-79
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSI (Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1-1 PE=2 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 4.140e-79
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_MEDSA (Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2)

HSP 1 Score: 294.278 bits (752), Expect = 5.406e-79
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTD+QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_HELAN (Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3)

HSP 1 Score: 294.278 bits (752), Expect = 5.406e-79
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLT+DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM6_ARATH (Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 SV=2)

HSP 1 Score: 294.278 bits (752), Expect = 5.406e-79
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL+DEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM3_PETHY (Calmodulin-related protein OS=Petunia hybrida GN=CAM53 PE=2 SV=2)

HSP 1 Score: 293.893 bits (751), Expect = 7.061e-79
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = -3 
Query:  327 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 770
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148

HSP 2 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -3 
Query:  324 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 554
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76

HSP 3 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = -3 
Query:  474 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 770
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+   + E+ +MI E D DG+G I++ EF+ +M    +    EE  +       +  NG
Sbjct:   73 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMANRRRRRIEESKRSVNSNISRSNNG 172
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSI (Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3 PE=2 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 9.222e-79
Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM5_SOLTU (Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE=1 SV=3)

HSP 1 Score: 293.123 bits (749), Expect = 1.204e-78
Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLT+DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:    1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_MALDO (Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 2.683e-78
Identity = 147/149 (98.66%), Postives = 147/149 (98.66%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPE LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEPLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSJ (Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CAM3 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.683e-78
Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV+EMIREADVDGDGQINY+EFVKVMMAK
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYDEFVKVMMAK 149
The following BLAST results are available for this feature:
BLAST of CB290649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 474
Match NameE-valueIdentityDescription
CALM1_ORYSJ4.140e-7998.66Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM1_ORYSI4.140e-7998.66Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1... [more]
CALM_MEDSA5.406e-7998.66Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2[more]
CALM_HELAN5.406e-7998.66Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3[more]
CALM6_ARATH5.406e-7998.66Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 ... [more]
CALM3_PETHY7.061e-7999.32Calmodulin-related protein OS=Petunia hybrida GN=C... [more]
CALM3_ORYSI9.222e-7997.99Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3... [more]
CALM5_SOLTU1.204e-7897.99Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE... [more]
CALM_MALDO2.683e-7898.66Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2[more]
CALM3_ORYSJ2.683e-7897.32Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CA... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cg06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cg06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290649 ID=CB290649; Name=CB290649; organism=Citrus sinensis; type=EST; length=811bp
TTTTTTTTTTTTTTTTTAACATGAAGTCATCACCTATCAATTTCTTATGC
ACAAAATCTCGAAATAAGAAATAAGGCAGATCAACGAGTCACTCATTTAA
CAGAAACAATGTTCACAGAAGAGCGGAAAAAAACTAAAACATTAAAAAAC
TGAAAAGTTGCTCCAGTCACAAGACAAATTGAAGCAGGAGACAACATGCT
TCCTTTAGCTTGACCTCAGAGTTATCAAATTAAAATTTATAAAAAAGGAA
ACTAGGGAACCAATTATATTAATCAACCAATTTCTTCTTTTTCCAGGAAG
TTTTGGTTGGGGGGAGTCACTTACTTAGCCATCATAACCTTGACAAATTC
CTCATAATTTATCTGGCCATCACCATCGACATCAGCTTCCCTTATCATCT
CATCGACTTCCTCATCAGTAAGCTTCTCCCCAAGGTTTGTCATCACATGA
CGCAGTTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAAAACCCG
GAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTGG
CCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTACCATCAGCA
TCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAGGGGGGTTCTGACC
CAGTGACCTCATAACAGTGCCAAGCTCCTTGGTGGTAATGCAACCGTCGC
CGTCCTTGTCGAACAAGCTGAAGGCTTCTTTAAACTCGGAGATCTGATCG
TCGGTGAGCTGATCCGCCATTTTCTTCTTTTTTTACACCGAAAACTAGGT
TTTTTTTTTCC
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