CB290649

Overview
NameCB290649
Unique NameCB290649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM2_ORYSJ (Calmodulin-2 OS=Oryza sativa subsp. japonica GN=CAM2 PE=2 SV=3)

HSP 1 Score: 291.967 bits (746), Expect = 2.683e-78
Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTD+QI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM2_ORYSI (Calmodulin-2 OS=Oryza sativa subsp. indica GN=CAM2 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.683e-78
Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTD+QI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_WHEAT (Calmodulin OS=Triticum aestivum PE=1 SV=3)

HSP 1 Score: 291.197 bits (744), Expect = 4.577e-78
Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTD+QI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQ+GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQDGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM1_ARATH (Calmodulin-1/4 OS=Arabidopsis thaliana GN=CAM1 PE=1 SV=3)

HSP 1 Score: 291.197 bits (744), Expect = 4.577e-78
Identity = 144/149 (96.64%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTD+QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV+EMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEEFVKIMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_SPIOL (Calmodulin OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 5.977e-78
Identity = 144/149 (96.64%), Postives = 148/149 (99.33%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MA++LTD+QI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MAZZLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_MAIZE (Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 5.977e-78
Identity = 145/149 (97.32%), Postives = 147/149 (98.66%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTD+QI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPE LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPELLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_FAGSY (Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3)

HSP 1 Score: 287.345 bits (734), Expect = 6.609e-77
Identity = 146/149 (97.99%), Postives = 146/149 (97.99%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMINEVD DGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDRDGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD-EVDEMIREADVDGDGQINYEEFVKVMMAK 148
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 280.411 bits (716), Expect = 8.079e-75
Identity = 138/149 (92.62%), Postives = 146/149 (97.99%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNG+ISAA+ RHVMTNLGEKLTDEEVDEMIREADVDGDGQ+NYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADWRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVKMMMAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_SOLLC (Calmodulin OS=Solanum lycopersicum GN=CALM1 PE=2 SV=2)

HSP 1 Score: 279.641 bits (714), Expect = 1.378e-74
Identity = 136/149 (91.28%), Postives = 147/149 (98.66%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MA+QLT++QI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMI+EVDAD NGTIDFPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M+AK
Sbjct:    1 MAEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVRMMLAK 149
[Close]
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM1_SOLTU (Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 4.009e-74
Identity = 135/149 (90.60%), Postives = 146/149 (97.99%), Query Frame = -3 
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MA+QLT++QI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP EAELQDMI+E DAD NGTIDFPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M+AK
Sbjct:    1 MAEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEADADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVRMMLAK 149
The following BLAST results are available for this feature:
BLAST of CB290649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 474
Match NameE-valueIdentityDescription
CALM2_ORYSJ2.683e-7897.32Calmodulin-2 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM2_ORYSI2.683e-7897.32Calmodulin-2 OS=Oryza sativa subsp. indica GN=CAM2... [more]
CALM_WHEAT4.577e-7897.32Calmodulin OS=Triticum aestivum PE=1 SV=3[more]
CALM1_ARATH4.577e-7896.64Calmodulin-1/4 OS=Arabidopsis thaliana GN=CAM1 PE=... [more]
CALM_SPIOL5.977e-7896.64Calmodulin OS=Spinacia oleracea PE=1 SV=2[more]
CALM_MAIZE5.977e-7897.32Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2[more]
CALM_FAGSY6.609e-7797.99Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3[more]
CALM_MOUSC8.079e-7592.62Calmodulin OS=Mougeotia scalaris PE=2 SV=3[more]
CALM_SOLLC1.378e-7491.28Calmodulin OS=Solanum lycopersicum GN=CALM1 PE=2 S... [more]
CALM1_SOLTU4.009e-7490.60Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cg06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cg06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290649 ID=CB290649; Name=CB290649; organism=Citrus sinensis; type=EST; length=811bp
TTTTTTTTTTTTTTTTTAACATGAAGTCATCACCTATCAATTTCTTATGC
ACAAAATCTCGAAATAAGAAATAAGGCAGATCAACGAGTCACTCATTTAA
CAGAAACAATGTTCACAGAAGAGCGGAAAAAAACTAAAACATTAAAAAAC
TGAAAAGTTGCTCCAGTCACAAGACAAATTGAAGCAGGAGACAACATGCT
TCCTTTAGCTTGACCTCAGAGTTATCAAATTAAAATTTATAAAAAAGGAA
ACTAGGGAACCAATTATATTAATCAACCAATTTCTTCTTTTTCCAGGAAG
TTTTGGTTGGGGGGAGTCACTTACTTAGCCATCATAACCTTGACAAATTC
CTCATAATTTATCTGGCCATCACCATCGACATCAGCTTCCCTTATCATCT
CATCGACTTCCTCATCAGTAAGCTTCTCCCCAAGGTTTGTCATCACATGA
CGCAGTTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAAAACCCG
GAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTGG
CCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTACCATCAGCA
TCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAGGGGGGTTCTGACC
CAGTGACCTCATAACAGTGCCAAGCTCCTTGGTGGTAATGCAACCGTCGC
CGTCCTTGTCGAACAAGCTGAAGGCTTCTTTAAACTCGGAGATCTGATCG
TCGGTGAGCTGATCCGCCATTTTCTTCTTTTTTTACACCGAAAACTAGGT
TTTTTTTTTCC
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