CB290649

Overview
NameCB290649
Unique NameCB290649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_CAEEL (Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1 SV=3)

HSP 1 Score: 271.937 bits (694), Expect = 2.873e-72
Identity = 133/149 (89.26%), Postives = 142/149 (95.30%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_TRYBG (Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 3.753e-72
Identity = 134/149 (89.93%), Postives = 144/149 (96.64%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVD DG+GTIDFPEFL LMARKM+D+DSEEE+KEAFRVFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    1 MADQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_TRYBB (Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 3.753e-72
Identity = 134/149 (89.93%), Postives = 144/149 (96.64%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVD DG+GTIDFPEFL LMARKM+D+DSEEE+KEAFRVFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    1 MADQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_PLECO (Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 3.753e-72
Identity = 132/149 (88.59%), Postives = 144/149 (96.64%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREAD+DGDGQINYEEFVK+M++K
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADIDGDGQINYEEFVKMMLSK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_STIJA (Calmodulin OS=Stichopus japonicus PE=1 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 4.901e-72
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_MYXGL (Calmodulin OS=Myxine glutinosa PE=2 SV=3)

HSP 1 Score: 271.166 bits (692), Expect = 4.901e-72
Identity = 132/149 (88.59%), Postives = 144/149 (96.64%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEV+ADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVNADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 6.401e-72
Identity = 132/149 (88.59%), Postives = 144/149 (96.64%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD +GFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_STRIE (Calmodulin OS=Strongylocentrotus intermedius PE=2 SV=3)

HSP 1 Score: 270.396 bits (690), Expect = 8.360e-72
Identity = 132/148 (89.19%), Postives = 142/148 (95.95%), Query Frame = -3
Query:  324 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 767
            ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    9 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 156          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 8.360e-72
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 270.396 bits (690), Expect = 8.360e-72
Identity = 132/149 (88.59%), Postives = 142/149 (95.30%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTCK 149          
The following BLAST results are available for this feature:
BLAST of CB290649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 474
Match NameE-valueIdentityDescription
CALM_CAEEL2.873e-7289.26Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1... [more]
CALM_TRYBG3.753e-7289.93Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV... [more]
CALM_TRYBB3.753e-7289.93Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2[more]
CALM_PLECO3.753e-7288.59Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 S... [more]
CALM_STIJA4.901e-7288.59Calmodulin OS=Stichopus japonicus PE=1 SV=2[more]
CALM_MYXGL4.901e-7288.59Calmodulin OS=Myxine glutinosa PE=2 SV=3[more]
CALM_RENRE6.401e-7288.59Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_STRIE8.360e-7289.19Calmodulin OS=Strongylocentrotus intermedius PE=2 ... [more]
CALM_PYUSP8.360e-7288.59Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]
CALMB_HALRO8.360e-7288.59Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cg06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cg06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290649 ID=CB290649; Name=CB290649; organism=Citrus sinensis; type=EST; length=811bp
TTTTTTTTTTTTTTTTTAACATGAAGTCATCACCTATCAATTTCTTATGC
ACAAAATCTCGAAATAAGAAATAAGGCAGATCAACGAGTCACTCATTTAA
CAGAAACAATGTTCACAGAAGAGCGGAAAAAAACTAAAACATTAAAAAAC
TGAAAAGTTGCTCCAGTCACAAGACAAATTGAAGCAGGAGACAACATGCT
TCCTTTAGCTTGACCTCAGAGTTATCAAATTAAAATTTATAAAAAAGGAA
ACTAGGGAACCAATTATATTAATCAACCAATTTCTTCTTTTTCCAGGAAG
TTTTGGTTGGGGGGAGTCACTTACTTAGCCATCATAACCTTGACAAATTC
CTCATAATTTATCTGGCCATCACCATCGACATCAGCTTCCCTTATCATCT
CATCGACTTCCTCATCAGTAAGCTTCTCCCCAAGGTTTGTCATCACATGA
CGCAGTTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAAAACCCG
GAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTGG
CCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTACCATCAGCA
TCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAGGGGGGTTCTGACC
CAGTGACCTCATAACAGTGCCAAGCTCCTTGGTGGTAATGCAACCGTCGC
CGTCCTTGTCGAACAAGCTGAAGGCTTCTTTAAACTCGGAGATCTGATCG
TCGGTGAGCTGATCCGCCATTTTCTTCTTTTTTTACACCGAAAACTAGGT
TTTTTTTTTCC
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