CB290649

Overview
NameCB290649
Unique NameCB290649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALMA_ARBPU (Calmodulin-alpha (Fragment) OS=Arbacia punctulata PE=2 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 2.059e-70
Identity = 129/142 (90.85%), Postives = 138/142 (97.18%), Query Frame = -3
Query:  345 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 770
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEF
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_HALOK (Calmodulin OS=Halichondria okadai PE=2 SV=3)

HSP 1 Score: 265.388 bits (677), Expect = 2.689e-70
Identity = 129/149 (86.58%), Postives = 141/149 (94.63%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            M D L+++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    1 MTDALSEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_PHYPO (Calmodulin OS=Physarum polycephalum PE=2 SV=3)

HSP 1 Score: 264.618 bits (675), Expect = 4.587e-70
Identity = 128/149 (85.91%), Postives = 142/149 (95.30%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            M D LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFL +MARKM DTD+EEE++EAF+VFDKD NGFISAAELRHVMTNLGEKL+DEEVDEMIREADVDGDGQ+NY+EFVK+M++K
Sbjct:    1 MVDSLTEEQIAEFKEAFSLFDKDGDGNITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMADTDTEEEIREAFKVFDKDGNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQVNYDEFVKMMLSK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_PLAFA (Calmodulin OS=Plasmodium falciparum PE=3 SV=4)

HSP 1 Score: 263.462 bits (672), Expect = 1.022e-69
Identity = 129/149 (86.58%), Postives = 142/149 (95.30%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MAD+LT++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINE+D DGNGTIDFPEFL LMARK+KDTD+EEEL EAFRVFD+D +G+ISA ELRHVMTNLGEKLT+EEVDEMIREAD+DGDGQINYEEFVK+M+AK
Sbjct:    1 MADKLTEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMMIAK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_PLAF7 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 1.022e-69
Identity = 129/149 (86.58%), Postives = 142/149 (95.30%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MAD+LT++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINE+D DGNGTIDFPEFL LMARK+KDTD+EEEL EAFRVFD+D +G+ISA ELRHVMTNLGEKLT+EEVDEMIREAD+DGDGQINYEEFVK+M+AK
Sbjct:    1 MADKLTEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMMIAK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_BLAEM (Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE=3 SV=3)

HSP 1 Score: 263.077 bits (671), Expect = 1.335e-69
Identity = 129/149 (86.58%), Postives = 143/149 (95.97%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP EAEL  MINEVDADGNGTIDFPEFL +MARKMKD+DSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKL+++EV+EMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELLVMINEVDADGNGTIDFPEFLTMMARKMKDSDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLSEDEVEEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_PARTE (Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 SV=3)

HSP 1 Score: 260.381 bits (664), Expect = 8.651e-69
Identity = 127/149 (85.23%), Postives = 142/149 (95.30%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MA+QLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNP EAELQDMINEVDADGNGTIDFPEFL+LMARKMK+ DSEEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTD+EVDEMIREAD+DGDG INYEEFV++M++K
Sbjct:    1 MAEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALL3_HUMAN (Calmodulin-like protein 3 OS=Homo sapiens GN=CALML3 PE=1 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 8.651e-69
Identity = 121/149 (81.21%), Postives = 142/149 (95.30%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MADQLT++Q++EFKEAFSLFDKDGDGCITT+ELGTVMRSLGQNP EAEL+DM++E+D DGNGT+DFPEFL +MARKMKDTD+EEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEEVDEMIR AD DGDGQ+NYEEFV+V+++K
Sbjct:    1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALL3_RAT (Calmodulin-like protein 3 OS=Rattus norvegicus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.517e-68
Identity = 121/149 (81.21%), Postives = 141/149 (94.63%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MA+QLT++QI+EFKEAFSLFDKDGDGCITT+ELGTVMRSLGQNP EAELQDM+NE+D DGNGT+DFPEFL +M+RKMKDTDSEEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEEVDEMI+ AD DGDGQ+NYEEFV ++++K
Sbjct:    1 MANQLTEEQIAEFKEAFSLFDKDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIQAADTDGDGQVNYEEFVHMLVSK 149          
BLAST of CB290649 vs. ExPASy Swiss-Prot
Match: CALM_NEUCR (Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 9.565e-68
Identity = 124/149 (83.22%), Postives = 140/149 (93.96%), Query Frame = -3
Query:  324 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 770
            MAD LT++Q+SEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:    1 MADSLTEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
The following BLAST results are available for this feature:
BLAST of CB290649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 474
Match NameE-valueIdentityDescription
CALMA_ARBPU2.059e-7090.85Calmodulin-alpha (Fragment) OS=Arbacia punctulata ... [more]
CALM_HALOK2.689e-7086.58Calmodulin OS=Halichondria okadai PE=2 SV=3[more]
CALM_PHYPO4.587e-7085.91Calmodulin OS=Physarum polycephalum PE=2 SV=3[more]
CALM_PLAFA1.022e-6986.58Calmodulin OS=Plasmodium falciparum PE=3 SV=4[more]
CALM_PLAF71.022e-6986.58Calmodulin OS=Plasmodium falciparum (isolate 3D7) ... [more]
CALM_BLAEM1.335e-6986.58Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE... [more]
CALM_PARTE8.651e-6985.23Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 S... [more]
CALL3_HUMAN8.651e-6981.21Calmodulin-like protein 3 OS=Homo sapiens GN=CALML... [more]
CALL3_RAT2.517e-6881.21Calmodulin-like protein 3 OS=Rattus norvegicus GN=... [more]
CALM_NEUCR9.565e-6883.22Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cg06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cg06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290649 ID=CB290649; Name=CB290649; organism=Citrus sinensis; type=EST; length=811bp
TTTTTTTTTTTTTTTTTAACATGAAGTCATCACCTATCAATTTCTTATGC
ACAAAATCTCGAAATAAGAAATAAGGCAGATCAACGAGTCACTCATTTAA
CAGAAACAATGTTCACAGAAGAGCGGAAAAAAACTAAAACATTAAAAAAC
TGAAAAGTTGCTCCAGTCACAAGACAAATTGAAGCAGGAGACAACATGCT
TCCTTTAGCTTGACCTCAGAGTTATCAAATTAAAATTTATAAAAAAGGAA
ACTAGGGAACCAATTATATTAATCAACCAATTTCTTCTTTTTCCAGGAAG
TTTTGGTTGGGGGGAGTCACTTACTTAGCCATCATAACCTTGACAAATTC
CTCATAATTTATCTGGCCATCACCATCGACATCAGCTTCCCTTATCATCT
CATCGACTTCCTCATCAGTAAGCTTCTCCCCAAGGTTTGTCATCACATGA
CGCAGTTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAAAACCCG
GAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTGG
CCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTACCATCAGCA
TCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAGGGGGGTTCTGACC
CAGTGACCTCATAACAGTGCCAAGCTCCTTGGTGGTAATGCAACCGTCGC
CGTCCTTGTCGAACAAGCTGAAGGCTTCTTTAAACTCGGAGATCTGATCG
TCGGTGAGCTGATCCGCCATTTTCTTCTTTTTTTACACCGAAAACTAGGT
TTTTTTTTTCC
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