CB290658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.333e-67 Identity = 126/213 (59.15%), Postives = 162/213 (76.06%), Query Frame = 1 Query: 205 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLAESTTDEDLKKFFGEYG 837 S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++KN E DE LK+ FG++G Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFG 215 HSP 2 Score: 140.584 bits (353), Expect = 1.066e-32 Identity = 82/224 (36.61%), Postives = 126/224 (56.25%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA++ +N LN++ + + R+ + R N++IKN + +D + L + F FG LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +K KF N++VKNL + DE L+K F +GTI Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI 320 HSP 3 Score: 108.612 bits (270), Expect = 4.489e-23 Identity = 68/197 (34.52%), Postives = 107/197 (54.31%), Query Frame = 1 Query: 199 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 738 GA +F T++Y+ + ++ D +L +LF + G LSV+V D S + S G+G+V++ DA +A+D +N LN K I + + + D R G N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 184 GARAKEF--TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.741e-67 Identity = 126/214 (58.88%), Postives = 162/214 (75.70%), Query Frame = 1 Query: 202 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-FNNVFVKNLAESTTDEDLKKFFGEYG 837 A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE + K K F NV++KN E DE LK+ F ++G Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFG 215 HSP 2 Score: 125.176 bits (313), Expect = 4.634e-28 Identity = 73/224 (32.59%), Postives = 124/224 (55.36%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD ++ + LYD FS G +LS +V D S GY +V++ A +A++ +N LN++ + + + R + G N++IKN + +D ++L + FS FG LS K+ D +G+SKGFGFV +E E A A++++NG I+ K +FVG +K ER+ +K KF N+++KNL ++ DE L+K F +G+I Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQ-AELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSI 320 HSP 3 Score: 109.768 bits (273), Expect = 2.015e-23 Identity = 71/213 (33.33%), Postives = 112/213 (52.58%), Query Frame = 1 Query: 199 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLA 789 GA +F T++Y+ + V D L +LFSQ G+ LSV+V RD +S G+G+V+Y DA +A++ +N ++ K I R + I + N++IKNLD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER K N +++ +A Sbjct: 184 GAKAKEF--TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER-----KAHLTNQYMQRVA 387
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 256.144 bits (653), Expect = 1.741e-67 Identity = 126/213 (59.15%), Postives = 161/213 (75.59%), Query Frame = 1 Query: 205 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLAESTTDEDLKKFFGEYG 837 S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++KN E DE LK FG++G Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFG 215 HSP 2 Score: 141.739 bits (356), Expect = 4.785e-33 Identity = 83/224 (37.05%), Postives = 126/224 (56.25%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA++ +N LN++ + + R+ + R N++IKN + +D + L D F FG LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +K KF N++VKNL + DE L+K F +GTI Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI 320 HSP 3 Score: 110.153 bits (274), Expect = 1.543e-23 Identity = 69/197 (35.03%), Postives = 107/197 (54.31%), Query Frame = 1 Query: 199 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 738 GA +F T++Y+ + ++ D +L DLF + G LSV+V D S + S G+G+V++ DA +A+D +N LN K I + + + D R G N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 184 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.741e-67 Identity = 126/213 (59.15%), Postives = 161/213 (75.59%), Query Frame = 1 Query: 205 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLAESTTDEDLKKFFGEYG 837 S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++KN E DE LK FG++G Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFG 215 HSP 2 Score: 141.739 bits (356), Expect = 4.785e-33 Identity = 83/224 (37.05%), Postives = 126/224 (56.25%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA++ +N LN++ + + R+ + R N++IKN + +D + L D F FG LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +K KF N++VKNL + DE L+K F +GTI Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI 320 HSP 3 Score: 110.153 bits (274), Expect = 1.543e-23 Identity = 69/197 (35.03%), Postives = 107/197 (54.31%), Query Frame = 1 Query: 199 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 738 GA +F T++Y+ + ++ D +L DLF + G LSV+V D S + S G+G+V++ DA +A+D +N LN K I + + + D R G N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 184 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_ASPNC (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.274e-67 Identity = 122/215 (56.74%), Postives = 163/215 (75.81%), Query Frame = 1 Query: 205 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 + NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++ +K F NV++KNL D++ +K F ++G I Sbjct: 47 AANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEI 261 HSP 2 Score: 127.102 bits (318), Expect = 1.220e-28 Identity = 76/223 (34.08%), Postives = 120/223 (53.81%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE------------TVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + S +D + K+ N++IKNLD ID F FG I S ++ D G+S+GFGFV F ESAQ A++++N I ++++VG +K ERE A K + N++VKNL + DE L++ FG YGTI Sbjct: 143 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLRELFGPYGTI 364
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.878e-67 Identity = 120/209 (57.42%), Postives = 163/209 (77.99%), Query Frame = 1 Query: 223 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+AQNAI +NGML+NDK+VFVGH + K++R++ +K F NV+VKN+ + TT+E+ + F ++G I Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEI 262 HSP 2 Score: 114.775 bits (286), Expect = 6.264e-25 Identity = 69/224 (30.80%), Postives = 120/224 (53.57%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE------------TVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + + +D + K+ N+++KN+D+ + D F FG I S +A D SG+S+GFGFV F + ++A A++ LN ++++VG +K ERE A K + N+++KNL++ DE L++ F YGTI Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTI 366 HSP 3 Score: 81.6481 bits (200), Expect = 5.876e-15 Identity = 59/241 (24.48%), Postives = 102/241 (42.32%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQS-----------------------------------------------------KGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 741 T++YV ++D + T+ + DLF + G++ S + RD + +S G+G+VN+ + +AA A++ LN + + R H R+ +RK N++IKNL ID + L + FSS+G I S K+ D + +S KGFGFV F + + A A+ ++N +++ K ++V RK R + Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKDNKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRKDVRRS 476
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.065e-67 Identity = 122/218 (55.96%), Postives = 166/218 (76.15%), Query Frame = 1 Query: 196 AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 A S +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++ +K F NV++KNL + ++E+ ++ F ++G I Sbjct: 38 AAPSTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDQEISEEEFRQMFEKFGEI 255 HSP 2 Score: 122.865 bits (307), Expect = 2.300e-27 Identity = 72/223 (32.29%), Postives = 120/223 (53.81%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE------------TVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + S +D + K+ N++IKNLD+ I + F FG I S ++ D G+S+GFGFV + +SAQ A+D++N + ++++VG +K ERE A K + N++VKNL + DE L++ F YGTI Sbjct: 137 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQEGKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLREMFAPYGTI 358
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.065e-67 Identity = 119/209 (56.94%), Postives = 162/209 (77.51%), Query Frame = 1 Query: 223 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++ +K F NV++KN+ + T+E+ ++ F ++G I Sbjct: 48 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEI 256 HSP 2 Score: 127.102 bits (318), Expect = 1.220e-28 Identity = 74/223 (33.18%), Postives = 122/223 (54.71%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE------------TVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + S +D + K+ N++IKN+D+ + + + F FG I S ++ D G+S+GFGFV F ESAQ A+D++N I ++++VG +K ERE A K + N++VKNL + DE L++ FG YGTI Sbjct: 138 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTI 359
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.065e-67 Identity = 125/213 (58.69%), Postives = 160/213 (75.12%), Query Frame = 1 Query: 205 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLAESTTDEDLKKFFGEYG 837 S + SLYVGDL + T++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++KN E DE LK FG++G Sbjct: 4 SAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFG 215 HSP 2 Score: 141.739 bits (356), Expect = 4.785e-33 Identity = 83/224 (37.05%), Postives = 126/224 (56.25%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA++ +N LN++ + + R+ + R N++IKN + +D + L D F FG LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +K KF N++VKNL + DE L+K F +GTI Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI 320 HSP 3 Score: 110.153 bits (274), Expect = 1.543e-23 Identity = 69/197 (35.03%), Postives = 107/197 (54.31%), Query Frame = 1 Query: 199 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 738 GA +F T++Y+ + ++ D +L DLF + G LSV+V D S + S G+G+V++ DA +A+D +N LN K I + + + D R G N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 184 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.474e-66 Identity = 122/220 (55.45%), Postives = 165/220 (75.00%), Query Frame = 1 Query: 190 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 V A A+ +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY + A RALD LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++ +K F N+++KN+ DE+ +K F ++G I Sbjct: 30 VEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEI 249 HSP 2 Score: 123.635 bits (309), Expect = 1.348e-27 Identity = 72/223 (32.29%), Postives = 121/223 (54.26%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE------------TVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + S +D + K+ NI+IKN+D ++ + F FG I S ++ D G+S+GFGFV F ESAQ A++++N + ++++VG +K ERE A K + N++VKNL + D+ L++ FG YGTI Sbjct: 131 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVDDDKLRELFGPYGTI 352 The following BLAST results are available for this feature:
BLAST of CB290658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290658 ID=CB290658; Name=CB290658; organism=Citrus sinensis; type=EST; length=845bpback to top |