CB290658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 9.885e-63 Identity = 118/217 (54.38%), Postives = 163/217 (75.12%), Query Frame = 1 Query: 193 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLAESTTD---EDLKKFFG 828 AA A G ++ SLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RAL+ LN++ + +S RIM+S RDP++RK+G GNIFIKNLD+SID+KALHDTF++FG+ILSCK+ TD +G+S+GF FV + E+A AI +NGML+NDK+V+VGH + K+ER + ++ +F NV++KN+ TD EDL K FG Sbjct: 35 AAAAPGGNTVSASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELRAQFTNVYIKNVDLEVTDAEFEDLVKPFG 251 HSP 2 Score: 109.768 bits (273), Expect = 2.015e-23 Identity = 68/224 (30.36%), Postives = 115/224 (51.34%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYS-------HRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN------------NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD ++ + L+D F+ G +LS +V D +S G+ +V+Y+ A A+ +N LN+K + + + + +R T N++IKN+D + D FG +S ++ D G SKGFGFV +EN ESA+ A+D+LN +N K+++ G K ERE K+ N++VKNL + D+ L+ F +GTI Sbjct: 135 NIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTD-ENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELRAQFT-NVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGTI 356 HSP 3 Score: 107.071 bits (266), Expect = 1.306e-22 Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI-------------RIMYSHRDPSIR---KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 735 T++Y+ ++D VTD++ DL G +SV + RD S G+G+VNY N A +A+D LN +N K + + SH + + KS N+++KNLD D L F +FG I S K+ D SG S+GFGFV + + + A A+ ++NG +I K ++V RK R Sbjct: 227 TNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRD-EKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQRKDVR 411
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_CHAGB (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.291e-62 Identity = 110/209 (52.63%), Postives = 160/209 (76.56%), Query Frame = 1 Query: 223 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 + SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + +D +AL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D +G SKG+GFV +E E+A AI +N ML+N+K+V+VG+ + K++R++ +K F N++VKN++ TDE+ + F +YG + Sbjct: 64 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNIYVKNISLEATDEEFRDLFAKYGDV 272 HSP 2 Score: 122.094 bits (305), Expect = 3.923e-27 Identity = 71/223 (31.84%), Postives = 119/223 (53.36%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYS--HRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT-------KFN-----NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y AA+A+ +N LN K + + Y +D + K+ NI++KN+ + D F+ +G++ S +A D G+S+GFGFV F E A A+++LNG + ++VG +K ERE K+ K N N+++KNLA+ D+ L++ F EYG I Sbjct: 154 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDIDDDKLRQMFSEYGPI 375 HSP 3 Score: 82.0333 bits (201), Expect = 4.499e-15 Identity = 66/232 (28.45%), Postives = 99/232 (42.67%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKI----ATDGS-----------------------------------------GQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 738 T++YV ++ TD + DLF++ G V S + RD S +S G+G+VN+ AA+A++ LN + + R H R+ +RKS N++IKNL ID L FS +G I S K+ T+GS G+SKGFGFV F N + A A+ ++N +I K ++V RK R+ Sbjct: 246 TNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARD-SEGKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDIDDDKLRQMFSEYGPITSAKVMRDAVTEGSAEEETEGKDKENKKEGEQAAEAEGEAEGAEKKTEKKGDRRLGKSKGFGFVCFSNPDDATKAVAEMNQRMIEGKPLYVALAQRKDVRK 476
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_YARLI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia lipolytica GN=PAB1 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.756e-62 Identity = 116/215 (53.95%), Postives = 158/215 (73.49%), Query Frame = 1 Query: 199 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYG 837 G+ +Q SLYVG+LD +VT++ L+++F+ +G V SVRVCRD TRRSLGY YVN+ N AD RAL+ LN++P+ + RIM+S RDP++RK+G GNI+IKNLD +ID+KALHDTFS+FG ILSCKIATD G S+GFGFV +E+ ESA++AI +NGML+NDK+VFVG + K +R K F NVF+KNL T+ + ++ ++G Sbjct: 37 GSKEDQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALEELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDRMQSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKFG 251 HSP 2 Score: 99.3673 bits (246), Expect = 2.723e-20 Identity = 67/223 (30.04%), Postives = 110/223 (49.33%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----RIMYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK-------TKFN-----NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++Y+ +LD + + L+D FS GQ+LS ++ D S G+G+V+Y + A A+ +N LN+K + + S R S +K+ N+FIKNL I + + FG S ++T+ G+ GFGFV ++ + A AID L+ ++F G +K ER K K N N+++KNL ++ D+ L+ F +GTI Sbjct: 135 NIYIKNLDPAIDNKALHDTFSAFGQILSCKIATD-EFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDRMQSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHDVAVKAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKNLDDTIDDDKLRAEFAPHGTI 356 HSP 3 Score: 82.0333 bits (201), Expect = 4.499e-15 Identity = 53/188 (28.19%), Postives = 94/188 (50.00%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI---------------RIMY-SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 741 T++++ +L +T+++ +L ++ G+ SV + + + G+G+V+Y A +A+D L+ T + R Y + R + K N++IKNLD +ID L F+ G I S K+ D +G+SKGFGFV + + E A A+ ++N L+ K ++V RK R + Sbjct: 227 TNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTN-DEGKPTGFGFVDYKEHDVAVKAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKNLDDTIDDDKLRAEFAPHGTITSAKVMVDEAGKSKGFGFVCYSSPEEATKAVTEMNHRLVAGKPLYVVLAQRKDVRRS 413
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.427e-61 Identity = 112/208 (53.85%), Postives = 160/208 (76.92%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--FNNVFVKNLAESTTDEDLKKFFGEYGTI 843 TSLYVG+LD +VT++ L+++FS +G V S+RVCRD TRRSLGY YVN+ N AD RA++ LN++ + N+ RIM+S RDP++R++G GNIFIKNLD ID+KALHDTF++FGNILSCK+AT+ +G S G+GFV +E E+A+ AI +NGML+NDK+V+VGH + ++ER+ +T+ F NV+ KN+ TD++ +K F ++G I Sbjct: 47 TSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKI 253 HSP 2 Score: 112.849 bits (281), Expect = 2.380e-24 Identity = 69/223 (30.94%), Postives = 116/223 (52.02%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY----SHRDPSIRKSGTG--NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT----------KFN--NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD + + L+D F+ G +LS +V + + SLGYG+V+Y A A+ +N LN+K + + + R I ++ N++ KN+D + F+ FG I SC + D G+SKGFGFV FE+ AQ A+D+L+ +++FV +K ERE ++ KF N+++KN+ ES DE L++ F +G I Sbjct: 136 NIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG--SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAI 356 HSP 3 Score: 96.2857 bits (238), Expect = 2.305e-19 Identity = 56/186 (30.11%), Postives = 102/186 (54.84%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY----SHRDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 735 T++Y ++D VTD + LF++ G++ S + RD +S G+G+VN+ + +A +A+D L+ + + + + S R+ +R+S N+++KN+ +S D + L + F+ FG I SCKI SG S+GFGFV + E A A+ ++NG +++++ ++V RK R Sbjct: 227 TNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRD-EDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDVR 411
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.424e-61 Identity = 114/211 (54.03%), Postives = 156/211 (73.93%), Query Frame = 1 Query: 211 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYG 837 ++ ++ SLYVGDLD +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + A A++ LNFTP+ K RIM+S RDPS+RK G GNIFIKNL ID+KAL+DTFS FGNILS K+ATD +G+SKGFG+V FE ESA AID LNGML+N ++++VG L K+ERE+ +K F NV++KN+ TTD++ ++ ++G Sbjct: 30 SETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELVAKFG 240 HSP 2 Score: 105.916 bits (263), Expect = 2.910e-22 Identity = 66/224 (29.46%), Postives = 112/224 (50.00%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----RIMYSHRDPSIR--KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +L ++ + LYD FS G +LS +V D T +S G+GYV++ A+ A+D LN LN + I + R+ K+ N++IKN++ K + + FG S + G++KGFGFV F N E A +++LN + ++V +K ER+ +K ++ N+F+KNL +S D+ L++ F YGTI Sbjct: 124 NIFIKNLHPDIDNKALYDTFSVFGNILSSKVATD-ETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQ-ELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTI 345 HSP 3 Score: 94.7449 bits (234), Expect = 6.708e-19 Identity = 58/188 (30.85%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSH----RDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 741 T++Y+ +++ TD + +L ++ G+ SV V + G+G+VN+ N DA + ++ LN T + + + + R ++K N+FIKNLD SID K L + F+ +G I S K+ T +G+SKGFGFV F E A AI + N ++ K ++V RK R + Sbjct: 216 TNVYIKNINTETTDKEFEELVAKFGKTDSV-VLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRS 402
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_CANAL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 1.023e-59 Identity = 112/227 (49.34%), Postives = 163/227 (71.81%), Query Frame = 1 Query: 169 QMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 Q + G ++G + N + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD +++SLGY YVNY D +A++ LN+ P+ + RIM+S RDPS R+SG GNIFIKNL +ID+KALHDTFS+FG ILSCK+ATD GQSK FGFV +E E+A+ AI+ +NGML+ND++VFVG + K++RE+ +K F N++VKN+ + ++E +K F +G I Sbjct: 36 QSAEEQGESSGVAEN---SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKAIEELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKI 259 HSP 2 Score: 111.309 bits (277), Expect = 6.925e-24 Identity = 72/223 (32.29%), Postives = 123/223 (55.16%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------ETVAI----KTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +L + + L+D FS G++LS +V D +S +G+V+Y A A++ +N LN++ + + S +D + K+ NI++KN+D + ++ FS FG I S + D G+SKGFGFV FE+ ESA A+++LN IN ++++VG +K+ER E V + K + N+FVKNL ++ E L++ F +GTI Sbjct: 141 NIFIKNLHPAIDNKALHDTFSAFGKILSCKVATD-EFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTI 362 HSP 3 Score: 104.375 bits (259), Expect = 8.465e-22 Identity = 60/188 (31.91%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRD----------------PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 741 T++YV ++D N ++ LFS G++ S+ + +D +S G+G+VN+ + A +A++ LN +N + I + + + + K N+F+KNLD +ID + L + F FG I S K+ D +G+SKGFGFV F E A AI ++N +IN K ++V RK R + Sbjct: 233 TNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKD-QDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYVALAQRKDVRRS 419
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.745e-59 Identity = 112/221 (50.68%), Postives = 162/221 (73.30%), Query Frame = 1 Query: 187 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 G AG G + + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD T++SLGY YVN+ AD +RA++ LN++ ++ + RIM+S RDPS+R++G GNIFIKNL +ID+KALHDTFS+FG ILSCK+ATD GQSK FGFV +E E+A+ AI+ +NGML+ND++VFVG + K++RE+ +K F NV+VKNLA + ++ F +G + Sbjct: 46 GEGAGEEGEE-ASASLYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEELNYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATDELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPV 265 HSP 2 Score: 112.849 bits (281), Expect = 2.380e-24 Identity = 71/223 (31.84%), Postives = 125/223 (56.05%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------ETVAIK--TKFN--NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +L + + L+D FS G++LS +V D +S +G+V+Y A A++ +N LN++ + + S RD + K+ N+++KNL +D+ + F FG + S + TD G+S+GFGFV FEN ESA NA+ ++N I+ ++++VG +K+ER E+ ++ +K+ N+FVKNL +S E L++ F +GTI Sbjct: 147 NIFIKNLHPAIDNKALHDTFSAFGRILSCKVATD-ELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTI 368 HSP 3 Score: 96.2857 bits (238), Expect = 2.305e-19 Identity = 60/188 (31.91%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 741 T++YV +L V +++ ++F G V SV + D +S G+G+VN+ N A A+ +N ++ + + R+ S R + K N+F+KNLD SID + L + F FG I S ++ D +G+SKGFGFV F + E A AI ++N +I K ++V RK R + Sbjct: 239 TNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETD-QEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQRKDVRRS 425
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.745e-59 Identity = 114/207 (55.07%), Postives = 149/207 (71.98%), Query Frame = 1 Query: 223 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLAESTTDEDLKKFFGEYG 837 T SLYVGDL +VT++ LY+ FS G +LS+R+CRDL T S Y YVN+ + DA ALD +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILSC + D +G SKG+GFV FE E+A+ AI K+NGML+N ++VFVG F ++ERE A +F NV++KN E DE LK FG++G Sbjct: 10 TASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFG 215 HSP 2 Score: 135.576 bits (340), Expect = 3.429e-31 Identity = 81/223 (36.32%), Postives = 121/223 (54.26%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT------------KFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 +++V +LD ++ + LYD S G +LS V D S GYG+V++ A RA+ +N LN + + + R+ + R N++IKN + +D + L D F FG LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +T + N++VKNL + DE L+K F +GTI Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCD--ENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTI 320 HSP 3 Score: 108.997 bits (271), Expect = 3.437e-23 Identity = 67/196 (34.18%), Postives = 104/196 (53.06%), Query Frame = 1 Query: 199 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 738 GA +F ++Y+ + ++ D +L DLF + G LSV+V D S + S G+G+V++ DA +A+D +N LN K I R + I + N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 184 GARAKEF--PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_ASHGO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya gossypii GN=PAB1 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.279e-59 Identity = 107/207 (51.69%), Postives = 158/207 (76.33%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 SLYVG+L+ V+++ LYD+FS +G V S+RVCRD T SLGY YVN+ + +A++ LN+T + K RIM+S RDPS+RK G+GNI+IKNL +ID+K+LH+TFS+FGNILSCK+ATD +G S+GFGFV FEN+ A++AI+ ++GML+ND++V+V + K++R++ +K KF NV+VKN+ + T+ E+ ++ FG+YG I Sbjct: 39 SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQLNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVSKKDRQSKLEEVKAKFTNVYVKNIDQETSQEEFEELFGKYGKI 245 HSP 2 Score: 110.923 bits (276), Expect = 9.045e-24 Identity = 67/224 (29.91%), Postives = 121/224 (54.02%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-------------ETVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 ++Y+ +L + + L++ FS G +LS +V D S G+G+V++ N +DA A++ ++ +N++ + + S +D + K+ N+++KN+D+ + + F +G I S + D G+ +GFGFV FE+ +A A+D+LN + ++++VG +K ER E +A K + N+FVKNL +S DE LK+ F +GTI Sbjct: 127 NIYIKNLHPAIDNKSLHETFSTFGNILSCKVATD-ENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVSKKDRQSKLEEVKAKFTNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDELNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLA-KYQGVNLFVKNLDDSIDDEKLKEEFAPFGTI 348 HSP 3 Score: 94.7449 bits (234), Expect = 6.708e-19 Identity = 57/186 (30.65%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRD----------------PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 735 T++YV ++D + + +LF + G++ S + +D S + G+G+VN+ + A AA+A+D LN + + + + + + K N+F+KNLD SID + L + F+ FG I S K+ D +G S+GFGFV F E A AI + N ++ K ++V RK+ R Sbjct: 219 TNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKD-SEGKLRGFGFVNFEDHAAAAKAVDELNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKLKEEFAPFGTITSAKVMRDETGNSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKEVR 403
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4) HSP 1 Score: 226.868 bits (577), Expect = 1.131e-58 Identity = 109/209 (52.15%), Postives = 156/209 (74.64%), Query Frame = 1 Query: 223 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--FNNVFVKNLAESTTDEDLKKFFGEYGTI 843 + SLYVGDL+ +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + +A++ LN+TP+ + RIM+S RDPS+RK G+GNIFIKNL ID+KAL+DTFS FG+ILS KIATD +G+SKGFGFV FE + +A+ AID LNGML+N ++++V L ++ER++ +TK + N++VKN+ TTDE ++ F ++G I Sbjct: 37 SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPI 245 HSP 2 Score: 118.242 bits (295), Expect = 5.665e-26 Identity = 71/223 (31.84%), Postives = 117/223 (52.47%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----RIMYSHRDPSIR--KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK----------TKFN--NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +L ++ + LYD FS G +LS ++ D +S G+G+V++ A A+D LN LN + I + RD + K+ N+++KN++ + + F+ FG I+S + D G+ KGFGFV +E E A A++ LN +N ++++VG +K ER V K K+ N+FVKNL +S DE L++ F YGTI Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTI 348 HSP 3 Score: 103.219 bits (256), Expect = 1.886e-21 Identity = 59/188 (31.38%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----------------MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 741 T+LYV +++ TD Q +LF++ G ++S + +D + G+G+VNY DA +A++ LN + LN + + + ++R + K N+F+KNLD S+D + L + F+ +G I S K+ +G+SKGFGFV F E A AI + N ++ K ++V RK R + Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLK-GFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRS 405 The following BLAST results are available for this feature:
BLAST of CB290658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290658 ID=CB290658; Name=CB290658; organism=Citrus sinensis; type=EST; length=845bpback to top |