CB290658

Overview
NameCB290658
Unique NameCB290658
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP5_GORGO (Polyadenylate-binding protein 5 OS=Gorilla gorilla gorilla GN=PABPC5 PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.025e-51
Identity = 106/212 (50.00%), Postives = 143/212 (67.45%), Query Frame = 1
Query:  214 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FNNVFVKNLAESTTDEDLKKFFGEYG 837
            ++L  +LYVGDLD +VT+  LY  F   G +   R+CRD  TR  LGYGYVN+  PADA  AL+ +NF  +N K  R+M+S  D  +RKSG GNIFIKNLDKSID++AL   FS+FGNILSCK+  D +G SKG+ +V F++  +A  AI  +NG+ +N++QV+VG F   +ER    ++T+    F NVFVKN+ +   DE LK+ F EYG
Sbjct:   14 KYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYG 223          

HSP 2 Score: 117.472 bits (293), Expect = 9.663e-26
Identity = 75/224 (33.48%), Postives = 123/224 (54.91%), Query Frame = 1
Query:  229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR---KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------ETVAIKTKFN----NVFVKNLAESTTDEDLKKFFGEYGTI 843
            ++++ +LD ++ +  L+ LFS  G +LS +V  D     S GY YV++ + A A RA+  +N   LNN+ + +        R   +R   ++   N+F+KN+   ID + L + F  +G   S K+  D SG+SKGFGFV++E  E+AQ A+  L+G  I+ K ++VG   +K ER        E + +K K       +++KNL E+  DE LK+ F  +G+I
Sbjct:  107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSI 328          

HSP 3 Score: 83.1889 bits (204), Expect = 2.020e-15
Identity = 56/183 (30.60%), Postives = 94/183 (51.37%), Query Frame = 1
Query:  226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNK----------------------SIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 708
            T+++V ++  ++ D +L +LF + G   SV+V RD S + S G+G+V Y     A +A+  L+   ++ K                       +R+    R P +       I+IKNLD++I+ + L + FSSFG+I   K+  +  GQ KGFG V F + E A  A+D++NG ++  K + V
Sbjct:  199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGK-SKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVP------IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHV 373          
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PAP1B_DICDI (Polyadenylate-binding protein 1-B OS=Dictyostelium discoideum GN=pabpc1B PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.646e-51
Identity = 116/243 (47.74%), Postives = 153/243 (62.96%), Query Frame = 1
Query:  160 HQAQMSGPNGVAAGASGNQFLT-------------TSLYVGDLDFNVTDSQLYDLFSQVGQ--VLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLAESTT----DEDLKKFFGE 831
            HQ   + P G  AGA+G   L+             TSLYVGDL  +V +  L +LFS+VG+  + S+ VCRD +T RSLGY YVN+ N  DA RALD LN+T ++ K  RIM+S+RDP+ RK+  GNIF+KNL+K +D+  L+DTFSSFGNILSCK+  +  G SKG+G+V FE  +SA+ AI+K+NG LI  K + V  F+ K ER  V      N VF +N  ES T     ++L   FGE
Sbjct:  149 HQHHHTSPMGAGAGAAGMPILSMSPIGAYQPPHQLTSLYVGDLAADVNEIILNELFSKVGRNAIASIHVCRDSNTLRSLGYAYVNFFNNHDAERALDTLNYTLVHGKPCRIMWSYRDPTKRKTNVGNIFVKNLEKGVDNAMLYDTFSSFGNILSCKVEFE-KGISKGYGYVHFETNDSAEKAIEKVNGTLILGKPINVERFVSKVERYKVE-----NKVFFRNADESITIEILQQELSNRFGE 385          

HSP 2 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 45/166 (27.11%), Postives = 75/166 (45.18%), Query Frame = 1
Query:  280 DLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV-----------------------LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 708
            +L ++ G++ S  +  D +  +S G G V + N  DA + L                         +N  P+    I+          +K+   ++FI N+D+SID   + + F+  G I+  KI  D + ++KGFGF+ F   + AQ A+D LNG     KQ+ V
Sbjct:  378 ELSNRFGEIESCILKND-ANGKSKGLGLVEFKNQEDAQKILTESGALIISTIDGTTTVSSNGGTIEINGKPITIDRIKSKVERFTEYRKKTTDLSLFINNIDESIDRDLIKEEFAKHGTIIGIKIVQDENARNKGFGFISFSEIQEAQKALDSLNGFTFGSKQIQV 542          
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABPX_ARATH (Probable polyadenylate-binding protein At2g36660 OS=Arabidopsis thaliana GN=At2g36660 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.364e-48
Identity = 94/217 (43.32%), Postives = 147/217 (67.74%), Query Frame = 1
Query:  193 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843
            A+ +  +  +T SLYVGDL  +VT+  LYD F++   + SVR+C+D S+ RSL YGY N+ +  DA  A++  N + LN K IR+M+S R P  R++G GN+F+KNL +S+ +  L D F  FGNI+SCK+AT   G+S+G+GFVQFE +++A  AI  LN  ++ DK+++VG F++K +R  V  + K+ N+++KNL    +++ L++ F E+G I
Sbjct:   13 ASSSGSSSPVTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDR--VKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKI 227          

HSP 2 Score: 113.62 bits (283), Expect = 1.395e-24
Identity = 68/219 (31.05%), Postives = 116/219 (52.97%), Query Frame = 1
Query:  229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV------------AIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843
            +++V +L  +VT++ L D+F + G ++S +V   L   +S GYG+V +     A  A+  LN T + +K I +       D    +    N+++KNLD  +    L + F+ FG I+S  IA D +   +G+ FV F+N E A+ A + +NG     K ++VG   +K ERE +             +  K +N++VKN+  + T+E+L+K F + GTI
Sbjct:  113 NVFVKNLPESVTNAVLQDMFKKFGNIVSCKVAT-LEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTI 330          

HSP 3 Score: 102.064 bits (253), Expect = 4.201e-21
Identity = 58/197 (29.44%), Postives = 109/197 (55.33%), Query Frame = 1
Query:  226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIRK------------SGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 768
            T+LY+ +LD +V++  L + F++ G+++S+ + +D   R   GY +VN+ NP DA RA + +N T   +K + +      + R+  +R+            +   NI++KN++ ++  + L   FS  G I S K+  D  G+SKGFGFV F   E A +A+   +G + + K ++V    +K++R+ + ++ +F N
Sbjct:  201 TNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKD-ENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQKKEDRK-MQLQVQFGN 395          
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_ENCCU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Encephalitozoon cuniculi GN=PAB1 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.150e-29
Identity = 74/209 (35.41%), Postives = 116/209 (55.50%), Query Frame = 1
Query:  229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI---DKLNGMLINDKQVFVGHFLRK-QERETVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843
            ++YVG+L     DS L+ +FS VG+VLSV++ +      S  + +V + N  DA RA+       L+N+ IR+M     P      TGNIF+KNL +    K L D FS FG I+SCK+AT   G+SKG+GFVQF+ K++A+  I     L+G+L+   ++ V  +  + ++ E+      F N F+KN     ++ +L +    YG +
Sbjct:   15 TIYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVSS--FAFVTFENEEDAERAIREYKHYELHNRQIRVMKKDERPP----ETGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCKVATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDGLLLGGNRIVVELYNPEIKKGESKKTSATFTNCFIKNFPFDASEAELLELLERYGKV 217          

HSP 2 Score: 77.0258 bits (188), Expect = 1.447e-13
Identity = 64/234 (27.35%), Postives = 106/234 (45.30%), Query Frame = 1
Query:  223 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI---RIMYSHRDPSIRKSGTG-------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI-------NDKQVFVGHFLRKQER--------ETVAIKTKF--NNVFVKNLAESTTDEDLKKFFGEYGTI 843
            T +++V +L  + T   L D FS  G+++S +V    S  +S GYG+V +     A + +   NF+ L+   +   RI+    +P I+K  +        N FIKN         L +    +G + S       +G+ KGF F  FEN ESA NAI  L+G            +  ++    RK+ER        E ++++ +    N+++ N+ E    E+L   F E+G I
Sbjct:   95 TGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCKVATT-SHGKSKGYGFVQFKEKKAAKKVIK--NFSSLDGLLLGGNRIVVELYNPEIKKGESKKTSATFTNCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGFAFANFENHESALNAIKNLHGTFPFGAGRDGTGEAFYIQKGQRKEERAEELRKMFEQMSMQGQSYKKNLYITNIPEGFGCEELGSIFKEFGNI 325          
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PES4_YEAST (Protein PES4 OS=Saccharomyces cerevisiae GN=PES4 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28
Identity = 78/242 (32.23%), Postives = 122/242 (50.41%), Query Frame = 1
Query:  232 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------------ETVAIK---------------------TKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843
            L++GDL   VT+  L  +F +    +S +VC D  T++SLG+GY+N+ +  +A +A++ LN+T +N K IRIM S R+ + RK+   N+F  NL   +  +  +  +DTFS +G ILSCK+        K  GFV FE++++A+N I   N      K++  G    K+ R              ET+  K                     +  N++F+KNL   TT +D+  FF E G I
Sbjct:   93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEELNYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILSCKL-----DSRKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFETQKSRLDAETIIEKEQSLNEKHSKGNDKESKNIYSSSQNSIFIKNLPTITTRDDILNFFSEVGPI 329          
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: ELAV_DROVI (Protein elav OS=Drosophila virilis GN=elav PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.925e-24
Identity = 69/199 (34.67%), Postives = 109/199 (54.77%), Query Frame = 1
Query:  139 MAQIQVQHQAQMSGPNGVAAGA----SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLST-------------RRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSG--QSKGFGFVQFENKESAQNAIDKLNG 678
            + Q QVQ Q Q +  NG + GA    +G+    T+L V  L   +T+ ++  LFS VG++ SV++ RD S               +SLGYG+VNY  P DA +A++VLN   L NK+I++ ++   PS       N+++  L K++  + L   F+ FG I++ +I  +     Q+KG GF++F+ +E A  AI  LNG
Sbjct:  152 VVQQQVQQQVQQANTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFAR--PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 348          
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: ELAV3_MOUSE (ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.925e-24
Identity = 60/168 (35.71%), Postives = 96/168 (57.14%), Query Frame = 1
Query:  181 PNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNG 678
            PNG   G +G      T+L V  L  N+T  +   LF  +G + S ++ RD  T +SLGYG+VNY++P DA +A++ LN   L  K+I++ Y+   PS       N+++  L K++  K +   FS +G I++ +I  D  +G S+G GF++F+ +  A+ AI  LNG
Sbjct:   23 PNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNG 188          
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: SAP49_SCHPO (Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe GN=sap49 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.045e-24
Identity = 54/168 (32.14%), Postives = 99/168 (58.93%), Query Frame = 1
Query:  229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC-KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 729
            ++Y+G+LD  VTDS L++L  Q G V+++ + RD       G+G+  + +  D   A  +LN   L  K IR+  + +D  +      N+F+ NLD  +D + L+DTFS+ G ++   ++A D +G+SKG+GFV +++ E+A  AI+ +N   + +K + V +  +++
Sbjct:   12 TIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILNQVKLFGKPIRVNRASQDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKRE 179          
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: ELAV3_HUMAN (ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 9.045e-24
Identity = 60/168 (35.71%), Postives = 96/168 (57.14%), Query Frame = 1
Query:  181 PNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNG 678
            PNG   G +G      T+L V  L  N+T  +   LF  +G + S ++ RD  T +SLGYG+VNY++P DA +A++ LN   L  K+I++ Y+   PS       N+++  L K++  K +   FS +G I++ +I  D  +G S+G GF++F+ +  A+ AI  LNG
Sbjct:   23 PNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNG 188          
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: SF3B4_DICDI (Splicing factor 3B subunit 4 OS=Dictyostelium discoideum GN=sf3b4 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.181e-23
Identity = 63/170 (37.06%), Postives = 98/170 (57.65%), Query Frame = 1
Query:  232 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL-SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 738
            L + DLD  VT+S L +LF Q   V+ V + +D  T++  G  YV + + +DA  AL V+ F  L NK I+I   ++D   +     N+FI NLD  +D + LHDTFS FG I+ + K+  D +G SKGF F+ F++ E++  AI+ +N   + +K + V +  +K   E
Sbjct:   15 LLIRDLDPMVTESLLMELFIQAAPVVKVFIPKDKLTQQHSGRAYVEFQSSSDAEYALKVMKFVRLFNKEIKIKKENKD---KVDIGANLFIGNLDADVDERILHDTFSRFGTIIFTPKVMRDENGVSKGFAFINFDSFEASDAAIEAMNSQFLCNKPISVTYARKKDSNE 181          
The following BLAST results are available for this feature:
BLAST of CB290658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
PABP5_GORGO1.025e-5150.00Polyadenylate-binding protein 5 OS=Gorilla gorilla... [more]
PAP1B_DICDI6.646e-5147.74Polyadenylate-binding protein 1-B OS=Dictyostelium... [more]
PABPX_ARATH2.364e-4843.32Probable polyadenylate-binding protein At2g36660 O... [more]
PABP_ENCCU7.150e-2935.41Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PES4_YEAST6.053e-2832.23Protein PES4 OS=Saccharomyces cerevisiae GN=PES4 P... [more]
ELAV_DROVI6.925e-2434.67Protein elav OS=Drosophila virilis GN=elav PE=3 SV... [more]
ELAV3_MOUSE6.925e-2435.71ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1... [more]
SAP49_SCHPO9.045e-2432.14Spliceosome-associated protein 49 OS=Schizosacchar... [more]
ELAV3_HUMAN9.045e-2435.71ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1... [more]
SF3B4_DICDI1.181e-2337.06Splicing factor 3B subunit 4 OS=Dictyostelium disc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cg10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cg10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290658 ID=CB290658; Name=CB290658; organism=Citrus sinensis; type=EST; length=845bp
GGTTTTTTCCCCTAGAATTATAGTCATAGAATCAGATTATTTATCCTGTT
ATCTCTCTAGATTTTTATTTGAGAACTAGCAAGAGAAGAGGGAAATAAAA
AAGCCAAAAAAAAAAAGAAGGATCTAGAAGTGGTAGTGATGGCACAGATT
CAGGTGCAACATCAAGCGCAAATGTCGGGGCCAAACGGAGTGGCGGCGGG
TGCGTCAGGGAACCAGTTCCTAACGACGTCTCTTTATGTTGGCGATCTCG
ATTTCAACGTGACCGATTCGCAGCTTTATGATCTGTTCAGCCAGGTCGGT
CAAGTTCTGTCGGTTAGGGTTTGTCGGGACCTGAGCACCAGGCGCTCACT
CGGCTATGGTTACGTTAACTACGCCAACCCTGCAGATGCGGCAAGGGCAC
TGGATGTTCTTAACTTCACTCCACTTAATAATAAGTCCATTAGAATCATG
TATTCCCATCGGGATCCTAGTATTCGGAAAAGCGGTACTGGGAACATATT
TATCAAGAATTTGGACAAGTCTATTGATCACAAAGCATTACACGATACAT
TTTCTTCATTCGGAAACATTCTTTCTTGTAAGATAGCTACTGATGGTTCT
GGCCAGTCCAAAGGTTTCGGTTTTGTGCAATTTGAGAACAAAGAATCTGC
TCAAAATGCTATTGATAAGTTAAATGGCATGCTTATTAATGATAAACAAG
TGTTTGTTGGGCACTTTCTTCGTAAGCAGGAAAGAGAAACTGTAGCAATT
AAAACAAAATTCAATAACGTATTTGTCAAAAACCTTGCTGAGTCCACTAC
AGATGAAGATTTGAAGAAATTTTTTGGTGAGTATGGAACAATTAC
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