CB290659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_UNCMA (Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I GN=tuf PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.032e-27 Identity = 55/138 (39.86%), Postives = 86/138 (62.32%), Query Frame = -2 Query: 387 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 800 N+GFNV+ + ++RG V + P A F +QV+++ HP I GY PV CHT+ +A ++++ +D ++G E+ P F+K GDA +V + PT+P+V+E + P LGRFA+RDM QTVA GV+ ++ K Sbjct: 290 NIGFNVRGIEKNLIRRGDVCGHVDKQPT-VAVEFKAQVVVLQHPSAITAGYTPVFHCHTAQVACTLTQILATLDPKTGGVKEQNPPFIKTGDAAIVLIRPTRPLVIEKVKEIPQLGRFAIRDMGQTVAAGVVMDITPK 426
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_NATPD (Elongation factor 1-alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=tuf PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.049e-26 Identity = 59/138 (42.75%), Postives = 86/138 (62.32%), Query Frame = -2 Query: 387 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 800 NVGFNV+ V D++RG V + DDP A F +QV++M HP I GY PV HT+ +A + KID SG+ E+ P F+++GDA +V + P KP+ +E+ ++ P LG FA+RDM QTVA G + +V ++ Sbjct: 286 NVGFNVRGVGKDDIRRGDVCGPA-DDPPSVAETFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDKKIDPSSGEVAEENPDFIQSGDAAVVTVRPQKPLSIESSNEIPELGSFAIRDMGQTVAAGKVLSVNER 422
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.049e-26 Identity = 57/136 (41.91%), Postives = 89/136 (65.44%), Query Frame = -2 Query: 393 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 800 NVG NV+ +DLKRG V + + P A +++ ++ HP IG GY PV+ HT+ + + EL++++D +G+ +E++P+F+K GD MV++ P KP+VVE FSD P LGRF++RDM +TVA G I ++ Sbjct: 302 NVGINVRGFERQDLKRGDVVGHLNNPPT-VAEEIVARIAVLEHPTTIGVGYTPVMHVHTATVPTQIIELISRLDPATGQTVEQKPQFIKRGDVAMVRLKPLKPVVVERFSDLPALGRFSLRDMGRTVAAGQIIEIK 436
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_NANEQ (Elongation factor 1-alpha OS=Nanoarchaeum equitans GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.789e-26 Identity = 58/138 (42.03%), Postives = 90/138 (65.22%), Query Frame = -2 Query: 387 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 800 N+GF+V+ + D+ RG VA + D+P A + + ++ HP I GYAPVL HT+H+ V+F EL K++ +G+ +E+ P+ L+ G+A +VK+ P KP+V+E F P LGRFA+RDM +TVA+G+ + V K Sbjct: 291 NIGFSVRGIEKGDVMRGDVAGHL-DNPPTVAEEIVALIHVIYHPSAITVGYAPVLHVHTAHVPVRFEELRGKVNPATGQVIEENPQALRPGEAAVVKLKPLKPVVIEPFDKIPQLGRFAIRDMGRTVAIGIARQVTPK 427
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_METBU (Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM 6242) GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.789e-26 Identity = 56/138 (40.58%), Postives = 85/138 (61.59%), Query Frame = -2 Query: 387 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 800 N+G+NV+ + D++RG V + D P A FT Q++++ HP I GY PV CHT+ A + K+D +SG+ E+ P ++K GDA +V + PT+PM +E S+ P LGRFA+RDM T+A G+ +V +K Sbjct: 285 NIGWNVRGIGKNDVRRGDVCGPA-DKPPSVADEFTGQIVVLQHPSAITVGYTPVFHCHTAQTACTLMAINKKLDPKSGQVKEENPTYIKAGDAAIVTIKPTRPMCIEPVSEIPQLGRFAIRDMGMTIAAGMCMSVTQK 421
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_HALWD (Elongation factor 1-alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=tuf PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26 Identity = 57/138 (41.30%), Postives = 85/138 (61.59%), Query Frame = -2 Query: 387 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 800 NVGFNV+ + D++RG V S + P A F +QV++M HP I GY PV HT+ +A + K+D SG+ E++P F+K+GDA +V + P KP+ +E ++ P LG FAVRDM QT+A G + V+++ Sbjct: 285 NVGFNVRGIGKDDIRRGDVCGPSSNAPT-VAETFKAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDQKLDPASGEVAEEDPDFIKSGDAAVVTVRPQKPLSIEPSNEIPELGSFAVRDMGQTIAAGKVLEVDER 421
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_HALSA (Elongation factor 1-alpha OS=Halobacterium salinarium GN=tuf PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26 Identity = 58/137 (42.34%), Postives = 85/137 (62.04%), Query Frame = -2 Query: 390 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 800 NVGFNV+ + D++RG V + DDP A F +QV++M HP I GY PV HT+ +A + K+D SG+ E+ P F+++GDA +V + P KP+ +E S+ P LG FAVRDM QT+A G + +V++ Sbjct: 285 NVGFNVRGIGKDDIRRGDVCGPA-DDPPSVADTFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDKKMDPASGETQEENPDFIQSGDAAVVTVRPQKPLSLEPSSEIPELGSFAVRDMGQTIAAGKVLDVDE 420
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_HALS3 (Elongation factor 1-alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26 Identity = 58/137 (42.34%), Postives = 85/137 (62.04%), Query Frame = -2 Query: 390 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 800 NVGFNV+ + D++RG V + DDP A F +QV++M HP I GY PV HT+ +A + K+D SG+ E+ P F+++GDA +V + P KP+ +E S+ P LG FAVRDM QT+A G + +V++ Sbjct: 285 NVGFNVRGIGKDDIRRGDVCGPA-DDPPSVADTFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDKKMDPASGETQEENPDFIQSGDAAVVTVRPQKPLSLEPSSEIPELGSFAVRDMGQTIAAGKVLDVDE 420
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: ERF3_ZYGRO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Zygosaccharomyces rouxii GN=SUP35 PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.740e-16 Identity = 44/136 (32.35%), Postives = 80/136 (58.82%), Query Frame = -2 Query: 393 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKNVE 797 V +K V +D+ GFV ++ K+ P + F +QV I+ + +G++ V+ HT+ V+ ++L+ K++R + ++ +K P F K G + + +P+ VET+ DYP LGRF +RD T+A+G ++K +E Sbjct: 528 VKLKIKGVEEEDIAPGFVLTSPKN-PVKNVTRFVAQVAIVELKSILSSGFSCVMHVHTAIEEVRITKLLHKLERGTNRKSKKPPAFAKKGMKIIAVLETERPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKIIE 662
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.740e-16 Identity = 44/131 (33.59%), Postives = 76/131 (58.02%), Query Frame = -2 Query: 405 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 797 V +K V +DL+ G+V ++ K+ P + F +Q+ I+ + NG++ V+ HT+ VKF EL K+++ + ++ +K P F K G + + ++P+ ET+ DYP LGRF +RD T+A+G I Sbjct: 579 VRLKIKGVEEEDLQPGYVLTSPKN-PVKTVTKFEAQIAIVELKSILSNGFSCVMHLHTAIEEVKFVELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVSEPVCAETYKDYPQLGRFTLRDQGTTIAIGKI 708 The following BLAST results are available for this feature:
BLAST of CB290659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290659 ID=CB290659; Name=CB290659; organism=Citrus sinensis; type=EST; length=801bpback to top |