CB290659

Overview
NameCB290659
Unique NameCB290659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_HELGL (Elongation factor 1-alpha (Fragment) OS=Helicoverpa gelotopoeon PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.233e-43
Identity = 77/121 (63.64%), Postives = 104/121 (85.95%), Query Frame = -2 
Query:  438 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 800
            NVGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  293 NVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_HELDI (Elongation factor 1-alpha (Fragment) OS=Heliocheilus discalis PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.233e-43
Identity = 77/121 (63.64%), Postives = 104/121 (85.95%), Query Frame = -2 
Query:  438 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 800
            NVGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  293 NVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_HELAM (Elongation factor 1-alpha (Fragment) OS=Helicoverpa armigera PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.233e-43
Identity = 77/121 (63.64%), Postives = 104/121 (85.95%), Query Frame = -2 
Query:  438 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 800
            NVGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  293 NVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_HELAL (Elongation factor 1-alpha (Fragment) OS=Heliocheilus albipunctella PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.233e-43
Identity = 77/121 (63.64%), Postives = 104/121 (85.95%), Query Frame = -2 
Query:  438 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 800
            NVGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  293 NVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_ANIIF (Elongation factor 1-alpha (Fragment) OS=Anicla infecta PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.233e-43
Identity = 77/121 (63.64%), Postives = 104/121 (85.95%), Query Frame = -2 
Query:  438 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 800
            NVGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  293 NVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_ADIBE (Elongation factor 1-alpha (Fragment) OS=Adisura bella PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.233e-43
Identity = 77/121 (63.64%), Postives = 104/121 (85.95%), Query Frame = -2 
Query:  438 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 800
            NVGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  293 NVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.359e-41
Identity = 78/134 (58.21%), Postives = 107/134 (79.85%), Query Frame = -2 
Query:  399 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKN 800
            NVGFNV NV+V+D+ RG V  ++K+DP  +  +  +QVI+MNHP  I  GY PV+DCHT+HIA KF ++++++D+R+GK L + P  +KNG + M +++P+KPM VETFSDYPPLGRFAVRDMRQTVAVG+IK+
Sbjct:  297 NVGFNVNNVSVEDIHRGNVCGDAKNDPPCKTES-DAQVIVMNHPSGIRPGYCPVVDCHTAHIACKFEKIMSEMDKRTGKVLRENPDIVKNGKSMMAQLVPSKPMCVETFSDYPPLGRFAVRDMRQTVAVGIIKS 429
[Close]
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.274e-40
Identity = 77/141 (54.61%), Postives = 107/141 (75.89%), Query Frame = -2 
Query:  378 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDPT 800
            NVGFNV+ +  K++K G V  ++K+DP + A +F +QVI+MNHPG I  GY PVLD HT+H+A KF  L++K + R+GK +E+ PKFLKNG++G+V+++PTKP+ VE FS Y  LGRF +RDM++TVAVGVI+ V  K  T
Sbjct:  293 NVGFNVR-LEAKEIKAGHVCGDAKNDPPKNAESFIAQVIVMNHPGHIKAGYQPVLDIHTAHVATKFKTLLSKNEARTGKLIEEAPKFLKNGESGIVELVPTKPLCVEEFSKYAALGRFVIRDMKRTVAVGVIQEVIHKKET 432
[Close]
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 8.860e-34
Identity = 67/136 (49.26%), Postives = 98/136 (72.06%), Query Frame = -2 
Query:  393 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 800
            N+GFNV+ V  KD+KRG V  +  + P   A  FT+++I++ HP  + NGY PV+  HT+ +A + SELV+K+D R+G+E EK P+FLK GD  +VK  P KP+ VE ++++PPLGRFA+RDM +TV VG+I +V+
Sbjct:  294 NIGFNVRGVEKKDIKRGDVVGHPNNPPT-VADEFTARIIVVWHPTALANGYTPVIHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLCVEKYNEFPPLGRFAMRDMGKTVGVGIIVDVK 428
[Close]
BLAST of CB290659 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.578e-33
Identity = 70/138 (50.72%), Postives = 100/138 (72.46%), Query Frame = -2 
Query:  387 NVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 800
            N+GFNV+ V  KD+KRG VA  S + P   A  FT+Q+I++ HP  +  GY PV+  HT+ +A + +EL +KID ++GKE+EK P+FLK+GD+ +VKM P K +VVE F ++P LGRFA+RDM +TV VGV+ +V+ K
Sbjct:  294 NIGFNVRGVEKKDIKRGDVAG-SLNVPPTVADEFTAQIIVIWHPTAVSVGYTPVVHIHTASVACRITELTSKIDPKTGKEVEKNPQFLKSGDSAIVKMKPIKELVVEKFREFPALGRFAMRDMGKTVGVGVVIDVKPK 430
The following BLAST results are available for this feature:
BLAST of CB290659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A_HELGL1.233e-4363.64Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELDI1.233e-4363.64Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_HELAM1.233e-4363.64Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELAL1.233e-4363.64Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_ANIIF1.233e-4363.64Elongation factor 1-alpha (Fragment) OS=Anicla inf... [more]
EF1A_ADIBE1.233e-4363.64Elongation factor 1-alpha (Fragment) OS=Adisura be... [more]
EF1A_BLAHO3.359e-4158.21Elongation factor 1-alpha OS=Blastocystis hominis ... [more]
EF1A2_EUPCR8.274e-4054.61Elongation factor 1-alpha 2 OS=Euplotes crassus GN... [more]
EF1A_SULSO8.860e-3449.26Elongation factor 1-alpha OS=Sulfolobus solfataric... [more]
EF1A_SULTO2.578e-3350.72Elongation factor 1-alpha OS=Sulfolobus tokodaii G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cg11_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cg11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290659 ID=CB290659; Name=CB290659; organism=Citrus sinensis; type=EST; length=801bp
TTTTTTTTTTTTTTAACGAAAAGTAGATATCAATTCCGCAGAACCATTAC
AAGGACAAAACTTCTGAGCCGATTCAGATGAAACCCAACCACCTCAAGTA
TCAATACAAACAAAGACCATAACTATTAATAAAATTGAGACTCCAGGTTA
GAGCTGCGCCACCGCCTGTCAAGCACCCAATTCTGGGAATCGGTACCCGA
CACCAAAGGCAACAAACTAAAACCTAAAAAGGAAAGCATGCATCGAACTA
TAACAGTACCAAAAATAACCAAGTTTGTATAACTACAATTATTAAAATAG
ACTCCATCTGCGGATAAAGCAACATTAACCAACCCGATTCACTTCTTCTT
GGCTGCAGACTTGGTGACCTTGGCACCTGTTGGATCCTTCTTTTCAACAT
TCTTAATCACACCAACAGCAACAGTCTGACGCATGTCCCTAACGGCAAAA
CGACCAAGAGGTGGGTAGTCAGAGAAGGTTTCAACAACCATGGGCTTGGT
GGGAATCATCTTAACCATTCCAGCATCTCCATTCTTCAAGAACTTGGGCT
CCTTCTCAAGCTCCTTGCCTGATCGCCTATCAATCTTCGTCACGAGCTCA
GAAAACTTGACGGCAATGTGGGAGGTGTGGCAGTCAAGCACTGGGGCATA
TCCATTTCCAATCTGGCCAGGGTGGTTCATGATGATGACCTGTGAGGTGA
AGTTGGCAGCTTCCCTGGCCGGATCATCCTTCGAGTTGGAAGCAACAAAA
CCACGCTTGAGATCCTTGACAGCAACGTTCTTCACGTTGAAGCCAACATT
G
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