CB290694

Overview
NameCB290694
Unique NameCB290694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: M2OM_BOVIN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.784e-21
Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = -3
Query:  323 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMM------GDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 685
            G  P +AR  +VNAA+LASY Q K+ +L    F+DNI  H  A + +GL       P+D+VK+R+       G   YKN +D  +K ++YEGF + +KGF P ++RLG   V+ F+ LEQ  K + R
Sbjct:  183 GCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQNMRMIDGKPEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKR 309          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: M2OM_MOUSE (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21
Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = -3
Query:  323 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMM------GDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 685
            G  P +AR  +VNAA+LASY Q K+ +L    F+DNI  H  A + +GL       P+D+VK+R+       G   YKN +D  +K ++YEGF + +KGF P ++RLG   V+ F+ LEQ  K + R
Sbjct:  183 GCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQNMRMIDGKPEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKR 309          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: KMCP1_RAT (Kidney mitochondrial carrier protein 1 OS=Rattus norvegicus GN=Slc25a30 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21
Identity = 54/126 (42.86%), Postives = 70/126 (55.56%), Query Frame = -3
Query:  332 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGD--------SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKV 685
            G+     R AIV   EL  YD  K+ ++      D + TH L+    GL      +P+DVV++RMM          S YK T+DC ++T K EGF A YKGF PN+ RLG WN+I FLT EQ KK+
Sbjct:  164 GVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVSTHFLSSFTCGLVGALASNPVDVVRTRMMNQRDLRDGRCSGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLKKL 289          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: KMCP1_MOUSE (Kidney mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a30 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.974e-21
Identity = 54/126 (42.86%), Postives = 70/126 (55.56%), Query Frame = -3
Query:  332 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSA--------YKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKV 685
            G+     R AIV   EL  YD  K+ ++      D + TH L+    GL      +P+DVV++RMM   A        YK T+DC ++T K EGF A YKGF PN+ RLG WN+I FLT EQ KK+
Sbjct:  164 GVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVATHFLSSFTCGLVGALASNPVDVVRTRMMNQRALRDGRCAGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLKKL 289          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: UCP4_HUMAN (Mitochondrial uncoupling protein 4 OS=Homo sapiens GN=SLC25A27 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21
Identity = 50/126 (39.68%), Postives = 79/126 (62.70%), Query Frame = -3
Query:  332 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDS--------AYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKV 685
            G  PNI R A+VN  +L +YD VK  ++      DNI TH L+ L +GL A  +G+P DV+KSR+M            YK++ DC I+ ++ EGF++ YKGFLP++ R+  W+++ +LT E+ +++
Sbjct:  192 GWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRMTPWSMVFWLTYEKIREM 317          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: M2OM_DICDI (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21
Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = -3
Query:  344 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMM-------GDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQ 685
            G  PN+ R   + A +++SYDQ K+ +L    F D+I TH++A   A   A    SP+DV+K+R+M       G+  YK T DC  KTL+ EGF AFYKGF P F RLG   ++ F+ +EQ
Sbjct:  185 GCSPNLIRAMFMTAGQVSSYDQTKQLMLASGYFHDDIKTHLIASTTAAFVAAVATSPLDVIKTRIMNSPKTVTGELQYKGTFDCLSKTLRAEGFKAFYKGFNPYFMRLGPQTILTFIFVEQ 305          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: KMCP1_MACFA (Kidney mitochondrial carrier protein 1 OS=Macaca fascicularis GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = -3
Query:  332 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGD--------SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKV 685
            G+     R AIV   EL  YD  K+ ++      D ++TH L+    GL      +P+DVV++RMM          S Y  T+DC ++T K EGF A YKGF PN+ RLG WN+I+F+T EQ KK+
Sbjct:  164 GVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLQDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIILFVTYEQLKKL 289          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: UCP5_HUMAN (Brain mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A14 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21
Identity = 54/127 (42.52%), Postives = 71/127 (55.91%), Query Frame = -3
Query:  326 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSA-------YKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFI 685
            G+ P   R AIV   EL  YD  K+ ++      D I TH ++    GL      +P+DVV++RMM   A       YK TVD  +K  K+EGF A YKGF PN+ RLG WN+I F+T EQ K++ I
Sbjct:  199 GVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 325          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: M2OM_HUMAN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = -3
Query:  323 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMM------GDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 685
            G  P +AR  +VNAA+LASY Q K+ +L    F+DNI  H  A + +GL       P+D+ K+R+       G   YKN +D   K ++YEGF + +KGF P ++RLG   V+ F+ LEQ  K + R
Sbjct:  183 GCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRMIDGKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKR 309          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: KMCP1_HUMAN (Kidney mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 52/126 (41.27%), Postives = 70/126 (55.56%), Query Frame = -3
Query:  332 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGD--------SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKV 685
            G+     R AIV   EL  YD  K+ ++      D ++TH L+    GL      +P+DVV++RMM          S Y  T+DC ++T K EGF A YKGF PN+ RLG WN+I F+T EQ KK+
Sbjct:  164 GVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTYEQLKKL 289          
The following BLAST results are available for this feature:
BLAST of CB290694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
M2OM_BOVIN1.784e-2140.94Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_MOUSE2.330e-2140.94Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
KMCP1_RAT3.043e-2142.86Kidney mitochondrial carrier protein 1 OS=Rattus n... [more]
KMCP1_MOUSE3.974e-2142.86Kidney mitochondrial carrier protein 1 OS=Mus musc... [more]
UCP4_HUMAN6.779e-2139.68Mitochondrial uncoupling protein 4 OS=Homo sapiens... [more]
M2OM_DICDI6.779e-2142.98Probable mitochondrial 2-oxoglutarate/malate carri... [more]
KMCP1_MACFA6.779e-2141.27Kidney mitochondrial carrier protein 1 OS=Macaca f... [more]
UCP5_HUMAN8.853e-2142.52Brain mitochondrial carrier protein 1 OS=Homo sapi... [more]
M2OM_HUMAN1.156e-2040.16Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
KMCP1_HUMAN1.156e-2041.27Kidney mitochondrial carrier protein 1 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01da06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01da06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290694 ID=CB290694; Name=CB290694; organism=Citrus sinensis; type=EST; length=696bp
TTTTTTTTTTTTTTTTTGAACATGAAAGCAATATTTGTTGAAGGCTCAGA
AAATGTGTTTTACATCATTCAGAATACAGTGTAGCATTGTATCAAATATC
AAATAACATGGAGAAGAACTACCTTGTAGTCTTACCCCTGATAAATCTAA
TTTCAAGTCCAATGAATAGTCACAAAGATACTATTCCCTCTCTATAAATG
GCAGTGGAAAGTAATATGTGCAGAGCCAACTTTCTCTCTTCAGGAAAACT
ATAATTTTGTGGGACTATCAAGCAAAAGCTGCTAGTTCCGCTTGTAAAAC
TCAATCAGTCAAAATACACTTCCCTGATGAAAACTTTCTTTGCTTGCTCA
AGGGTCAGAAACATGATCACATTCCAAGATCCCAGTCGGCTAAAATTTGG
TAGAAACCCCTTATAGAAGGCCAAGAATCCCTCATACTTCAAGGTCTTGA
TGAAACAATCAACAGTATTTTTGTAGGCTGAATCTCCCATCATTCTAGAT
TTCACCACATCAATGGGAGAACCAATACAGACAGCAAAGAGGCCTGCACC
AAGACCAGCTAGGATATGAGTGAAAATATTGTCCGTGAACCCTGGAATTT
TCAAAATTGTCTCTTTTACTTGATCATAACTGGCTAGTTCAGCAGCATTT
ACAATAGCATTTCGTGCTATATTGGGTCCAAGTCCCGTCCCTCGTG
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