CB290743

Overview
NameCB290743
Unique NameCB290743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP4AP_PIG (Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.376e-15
Identity = 49/198 (24.75%), Postives = 95/198 (47.98%), Query Frame = -1
Query:  233 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQE 826
            +F+  G DT ASG++   + L+ H E +   R E   ++      ++++ L ++ Y    + E++RL+PPV   S+   +    PDG  +  G  ++   Y++    ++W P+  EF P R+        ++   +  F  G R C+GK  A+ EMK A    + +F +   DP++ P   P +      G+ + +++
Sbjct:  311 TFMFEGHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTS-ITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGIILSLSVYSLHHNPQVW-PNPEEFDPSRFAPGSA---RHSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTLLRFEL-APDPSRKPTVIPEVVLHSKNGIHLKLRK 502          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.376e-15
Identity = 49/198 (24.75%), Postives = 94/198 (47.47%), Query Frame = -1
Query:  233 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQE 826
            +F+  G DT ASG++   + L+ H E +   R E   ++      ++++ L ++ Y    + E++RL+PPV   S+   +    PDG  +  G  ++   Y +    ++W P+  EF P R+        ++   +  F  G R C+GK  A+ EMK A    + +F +   DP++ P   P +      G+ + +++
Sbjct:  311 TFMFEGHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTS-ITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGITLSLSIYGLHHNPQVW-PNPEEFDPSRFAPGSA---RHSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTLLRFEL-APDPSRKPIATPEVVLNSKNGIHLKLRK 502          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP9E2_BLAGE (Cytochrome P450 9e2 OS=Blattella germanica GN=CYP9E2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.409e-15
Identity = 61/209 (29.19%), Postives = 104/209 (49.76%), Query Frame = -1
Query:  230 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILP--DGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQN-----PFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAP--RFAPGLTATVSGGLPVMVQER 829
            V F  AG DT ++ L     LL+ + +V++ +++E D+ ++ N   +++E +  + YL+  V ES+RL+PP  F  +   ++  LP      +  G  V    YA+    + + P+  +F PER      F  +N     PF Y  F +G R C+G   AL+E K A + ++ +FN++V      P      G   TV GG  + ++ER
Sbjct:  329 VLFFFAGFDTASTLLCFMSHLLATNPDVQNRLQDEIDQSLEENDGKLTYEAIHSMKYLDMVVSESLRLYPPAIFTDRKCVKNYRLPMEPSYTLEPGDAVWIPIYAIHHDPKYY-PNPEKFDPER------FSDENKDNIKPFTYLPFGSGPRNCIGNRFALMESKIALVHLLCRFNLKVVSKTPIPIKITKKGFNMTVDGGFWLGLEER 530          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP4B1_MOUSE (Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.409e-15
Identity = 56/205 (27.32%), Postives = 96/205 (46.83%), Query Frame = -1
Query:  227 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQN-----PFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQERG 826
            +F+  G DT  SG++ F + ++ +   +   R E  +I+  ++D   ++ L ++ YL   + E  RL+PPV    +   +     DG  +  G+ ++ H YA+ R   +W PD   F P R      F P+N     PF +  F AG R C+G+  A+ EMK      + +F     DP++ P   P L      G+ + ++  G
Sbjct:  311 TFMFEGHDTTTSGISWFLYCMALYPMHQQRCREEVREILG-DRDSFQWDDLAQMTYLTMCMKECFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVW-PDPEVFDPLR------FSPENMTGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFS-PDPSKIPIKVPQLILRSKNGIHLYLKPLG 506          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: C12A4_DROME (Probable cytochrome P450 12a4, mitochondrial OS=Drosophila melanogaster GN=Cyp12a4 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.758e-15
Identity = 55/188 (29.26%), Postives = 92/188 (48.94%), Query Frame = -1
Query:  299 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPY-AMGRMERIWGPDCSEFKPERWLRN----------GTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQ 829
            +  L+AG DT +S  T+    L+++ E ++ +R E  K++       +   ++ + YL A + ES RL P +  +++    D +L  G  V  GT V   P  A+ R E  + P  SEF PERWLR+                NPF +  F  G R+C+GK +  +E++     ++R FN+  + P +
Sbjct:  328 MDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVMKVLPNKNSEFTEASMKNVPYLRACIKESQRLHPLIVGNARVLARDAVL-SGYRVPAGTYVNIVPLNALTRDE--YFPQASEFLPERWLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNYPTE 512          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP3A7_HUMAN (Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.520e-15
Identity = 51/179 (28.49%), Postives = 94/179 (52.51%), Query Frame = -1
Query:  293 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAP 829
            + F+ AG +T +S L+   + L+ H +V+  ++ E D ++ PN+   +++ + +L YL+  V E++RLFP      +  ++D +  +G F+ KG  V    Y +    + W  +  +F PER+ +       +P+ Y  F +G R C+G   ALV MK A + V++ F+ +     Q P
Sbjct:  300 IIFIFAGYETTSSVLSFIIYELATHPDVQQKVQKEIDTVL-PNKAPPTYDTVLQLEYLDMVVNETLRLFPVAMRLERVCKKD-VEINGMFIPKGVVVMIPSYVLHHDPKYWR-EPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALVNMKLALVRVLQNFSFKPCKETQIP 474          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: C4AE1_DROME (Cytochrome P450 4ae1 OS=Drosophila melanogaster GN=Cyp4ae1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.520e-15
Identity = 57/173 (32.95%), Postives = 92/173 (53.18%), Query Frame = -1
Query:  320 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDL---VSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQ-NPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNI 826
            +F+  G DT  S ++   +LLS+H  V+  +  E    M   QDL   V       L YL+  V ES+RL+PP+   ++  ++D ++ +G ++  GT V    + + R E I+  D   F+PER L  G   P+ +P+ Y  F AG R C+G+  AL+EMK+    V+R + +
Sbjct:  300 TFIFEGHDTTTSAVSFCLYLLSRHEAVQQKLFEELR--MHYGQDLFRGVILSDFATLPYLSCVVKESLRLYPPIPAVARCLEKDLVIDEG-YIPVGTNVVVLLWQLLRDEAIF-TDPLVFQPERHL--GEEAPRLSPYSYIPFSAGPRNCIGQKFALLEMKTMVTKVIRHYQL 466          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: C4AC3_DROME (Probable cytochrome P450 4ac3 OS=Drosophila melanogaster GN=Cyp4ac3 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.520e-15
Identity = 55/199 (27.64%), Postives = 99/199 (49.75%), Query Frame = -1
Query:  230 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQER 826
            +F+  G DT ++ L     LL+ H++V+     E   + + + D VS  Q  EL +L   + ES+RLFP      +   E+ ++ +G  + K  +++ H Y + R  R + P  ++F PER+L   + V ++PF +  F AG R C+G+   ++E+K    AV+R F +  +   +   F  G+       + V  + R
Sbjct:  313 TFMFGGYDTTSTSLIFTLLLLALHADVQERCYEELQDLPE-DIDEVSMFQFNELIHLECVIKESLRLFPSAPIIGRTCIEESVM-NGLVLPKNAQISIHIYDIMRDARHF-PKPNQFLPERFLPENS-VNRHPFAFVPFSAGPRNCIGQKFGVLEIKVLLAAVIRNFKLLPATQLEDLTFENGIVLRTQQNIKVKFEAR 507          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP131_DROME (Probable cytochrome P450 313a1 OS=Drosophila melanogaster GN=Cyp313a1 PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 9.822e-15
Identity = 48/199 (24.12%), Postives = 92/199 (46.23%), Query Frame = -1
Query:  227 LLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDL-VSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQERG 820
            + AG DT A  +    +LL+ H E + A+  E + +        +++  +++L YL   + E++RL P +   ++  + D  L +G  + KG  +    +   R   +WGPD   F P+ +L       ++P+ Y  F  G R C+G   A++  K A   ++R + I  S   +   +   +T  ++    + +Q RG
Sbjct:  295 IAAGYDTSALTVYHALFLLANHPEHQEAVFEELNGVFPDAGHFGITYPDMQKLDYLERVIKETLRLIPAIPITARETKNDVRLSNGVLIPKGVVIGIDMFHTHRNPEVWGPDADNFNPDNFLAE-NMEQKHPYAYIPFARGKRNCIGSKYAMMSSKFALCRILRNYKISTSTLYKDLVYVDNMTMKLAEYPRLKLQRRG 492          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.822e-15
Identity = 51/177 (28.81%), Postives = 83/177 (46.89%), Query Frame = -1
Query:  293 FLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAP 823
            FL+AG DT A  L+   +LL+ H E++  ++ E ++   PN + V+ +QL +L Y+     E++RL+P   F +      +       V  GT +    + +     IWG D  +FKPERW    +        Y  F  G R C+G  +A +E K   + ++RKF        + P
Sbjct:  323 FLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNREC-PNPE-VTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFETGAKTEIP 497          
The following BLAST results are available for this feature:
BLAST of CB290743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 224
Match NameE-valueIdentityDescription
CP4AP_PIG3.376e-1524.75Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2... [more]
CP4AO_PIG3.376e-1524.75Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]
CP9E2_BLAGE4.409e-1529.19Cytochrome P450 9e2 OS=Blattella germanica GN=CYP9... [more]
CP4B1_MOUSE4.409e-1527.32Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1... [more]
C12A4_DROME5.758e-1529.26Probable cytochrome P450 12a4, mitochondrial OS=Dr... [more]
CP3A7_HUMAN7.520e-1528.49Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1... [more]
C4AE1_DROME7.520e-1532.95Cytochrome P450 4ae1 OS=Drosophila melanogaster GN... [more]
C4AC3_DROME7.520e-1527.64Probable cytochrome P450 4ac3 OS=Drosophila melano... [more]
CP131_DROME9.822e-1524.12Probable cytochrome P450 313a1 OS=Drosophila melan... [more]
C13A1_CAEEL9.822e-1528.81Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01dc09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dc09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290743 ID=CB290743; Name=CB290743; organism=Citrus sinensis; type=EST; length=829bp
TTTTTTTTTTTTTTTTAATAATTACTGACTTGAGATATATACCCCTTTAG
GAGACTAATACCAATAATCCAACTGTTTCAGTCAACCTCAAAGTTCCAAG
AAAGAAGTTATGGAATTAAAAGAACGTCTTAGTGTAAAATATTTACATAT
TCAAAACTATTCATGATATCCAGCATTAATTACTGTGTACAATCTGTTCT
AGCTTTAGTTAGCTAGCAAGCTAGTCTCCTCTTTCTTGAACCATCACCGG
TAAGCCGCCGCTCACGGTGGCAGTCAGACCGGGCGCAAACCGTGGAGCCT
GATTTGGATCCGAAACCCGAATGTTGAACTTCCTGACAACTGCAAGAGCC
GCACTTTTCATCTCCACTAGCGCCATATCCTTGCCCAAACAAACCCTATG
CCCAGCTTGAAAAACCGGGTACTTAAATGGGTTTTGGGGCACGAATGTTC
CATTTCTAAGCCATCTCTCAGGCTTGAATTCTGAACAATCTGGACCCCAA
ATCCGCTCCATCCGACCCATTGCGTACGGATGATATGTAACCCTAGTGCC
TTTTCTTACAAACGTACCATCCGGTAATATATCATCTTCTTGGGCAAACT
TGGAGTCAAACTGCACAGGAGGAAACAGCCTCATGCTCTCGTATACGGCG
GCGTTTAAGTAATGCAATTCTCGTAATTGTTCAAAGCTGACAAGATCCTG
ATTTGGCTTCATGATTTTATCTGACTCGTTTCTGATTGCTGATTCCACTT
CAGAATGTTGAGATAGCAACCAGAAGAAGCTTGTGAGCCCTGAGGCCACA
GTGTCACGACCGGCCAATAGGAAGCTGAC
back to top