CB290743

Overview
NameCB290743
Unique NameCB290743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP4D1_DROME (Cytochrome P450 4d1 OS=Drosophila melanogaster GN=Cyp4d1 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.121e-18
Identity = 60/201 (29.85%), Postives = 103/201 (51.24%), Query Frame = -1
Query:  230 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDL-VSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIR-VSDPNQAPRFAPGLTATVSGGLPVMVQER 826
            +F+  G DT +S L  FF+ ++ H E +     E   ++  ++   VS+E L +LHY++  V E++R++P V    +   ED  + +G  +  GT +   P  +GR E ++  + + FKPER+    T    NP+ Y  F AG R C+G+  A++E+K+    V+R + +  V D ++ P     L       L   V+ER
Sbjct:  312 TFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEI-NGKLIPAGTNIGISPLYLGRREELFS-EPNSFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRER 510          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP3A6_RABIT (Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CYP3A6 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.121e-18
Identity = 61/181 (33.70%), Postives = 103/181 (56.91%), Query Frame = -1
Query:  293 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQED-DILPDGTFVRKGTRVTYHPYAMGRMERIWG-PDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAP 829
            +  L AG +T +S L+    LL+ H +V+  ++ E D ++ PN++L +++ L ++ YL+  V E++RL+P      +  ++D DI  +GTF+ KGT V    YA+ R  + W  PD  EF+PER+ +       NP+ Y  F AG R CLG   AL+ +K A + +++ F+ ++    Q P
Sbjct:  298 IIILFAGYETTSSTLSFIMHLLATHPDVQQKLQEEIDTLL-PNKELATYDTLVKMEYLDMVVNETLRLYPIAGRLERVCKKDVDI--NGTFIPKGTIVMMPTYALHRDPQHWTEPD--EFRPERFSKKNKD-NINPYIYHPFGAGPRNCLGMRFALMNIKLALVRLMQNFSFKLCKETQVP 472          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP4FE_MOUSE (Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus GN=Cyp4f14 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.464e-18
Identity = 61/203 (30.05%), Postives = 100/203 (49.26%), Query Frame = -1
Query:  236 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQ-DLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQN-----PFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQ 826
            +F+  G DT ASGL+   + L++H E +   R E  ++++  + + + ++ L +L +L   + ES+RL PPV   S+   +D +LPDG  + KG       + +     +W PD   + P R      F P+N     P  +  F AG R C+G+  A+ EMK A    + +F +   D  + PR  P L     GGL + V+
Sbjct:  324 TFMFEGHDTTASGLSWILYNLARHPEYQERCRQEVQELLRGREPEEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVW-PDPEVYDPFR------FDPENIKDSSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRLLPDD--KEPRRQPELILRAEGGLWLRVE 517          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP4FB_HUMAN (Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.464e-18
Identity = 58/201 (28.86%), Postives = 99/201 (49.25%), Query Frame = -1
Query:  227 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDL-VSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQERG 826
            +F+  G DT ASGL+   + L++H E +   R E  +++K  + + + ++ L +L +L   + ES+RL PPV   S+   +D +LPDG  + KG     +   +     +W PD   + P R+        ++P  +  F AG R C+G+  A+ EMK   +  +   + R+   +  PR  P L     GGL + V+  G
Sbjct:  324 TFMFEGHDTTASGLSWVLYHLAKHPEYQEQCRQEVQELLKDREPIEIEWDDLAQLPFLTMCIKESLRLHPPVPVISRCCTQDFVLPDGRVIPKGIVCLINIIGIHYNPTVW-PDPEVYDPFRF-NQENIKERSPLAFIPFSAGPRNCIGQAFAMAEMK--VVLALTLLHFRILPTHTEPRRKPELILRAEGGLWLRVEPLG 520          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP52E_CANMA (Cytochrome P450 52A5 OS=Candida maltosa GN=CYP52A5 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.912e-18
Identity = 63/206 (30.58%), Postives = 102/206 (49.51%), Query Frame = -1
Query:  251 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIM----KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILP-----DGT---FVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKF-NIRVSDPNQAPRFAPGLTATVSGGL 829
            ++ ++AGRDT A  L+   + L+++ ++ + +R E +       +   D +SFE L++  YL A + E++R++P V  + + A  D  LP     DGT   FV KG+ V Y  Y   R+E  +G D  EF+PERW    T   +  + Y  F  G R+CLG+  AL E       + + F ++   D    P     LT   + G+
Sbjct:  315 LNIMVAGRDTTAGLLSFAMFELARNPKIWNKLREEIEVNFGLGEEARVDEISFETLKKCEYLKAVLNETLRMYPSVPVNFRTATRDTTLPRGGGKDGTSPIFVPKGSSVVYTVYKTHRLEEYYGKDAYEFRPERWFEPST--RKLGWAYVPFNGGPRICLGQQFALTEASYVITRLAQMFEHLESKDETYPPNKCIHLTMNHNEGV 518          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP4F3_MOUSE (Leukotriene-B(4) omega-hydroxylase 2 OS=Mus musculus GN=Cyp4f3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.912e-18
Identity = 59/198 (29.80%), Postives = 100/198 (50.51%), Query Frame = -1
Query:  236 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQ-DLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQ 826
            +F+  G DT ASGL+   + L++H E +   R E  ++++  + + + ++ L +L +L   + ES+RL PPV   S+   +D +LPDG  + KG       +       +W PD   + P R+  +     ++P  +  F AG R C+G+  A+ EMK A    + +F  RV   ++ PR  P L     GGL + V+
Sbjct:  324 TFMFGGHDTTASGLSWILYNLARHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPVTAISRCCTQDIVLPDGRVIPKGVISRISIFGTHHNPAVW-PDPEVYDPFRFDADNV-KGRSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRF--RVLPDDKEPRRKPELILRAEGGLWLKVE 517          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP4F2_HUMAN (Leukotriene-B(4) omega-hydroxylase 1 OS=Homo sapiens GN=CYP4F2 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.498e-18
Identity = 62/203 (30.54%), Postives = 96/203 (47.29%), Query Frame = -1
Query:  236 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDL-VSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQN-----PFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQ 826
            +F+  G DT ASGL+   + L++H E +   R E  +++K  +   + ++ L  L +L   + ES+RL PPV   S+   +D +LPDG  + KG       +       +W PD   + P R      F P+N     P  +  F AG R C+G+  A+ EMK      + +F  RV   +  PR  P L     GGL + V+
Sbjct:  324 TFMFEGHDTTASGLSWVLYHLAKHPEYQERCRQEVQELLKDREPKEIEWDDLAHLPFLTMCMKESLRLHPPVPVISRHVTQDIVLPDGRVIPKGIICLISVFGTHHNPAVW-PDPEVYDPFR------FDPENIKERSPLAFIPFSAGPRNCIGQTFAMAEMKVVLALTLLRF--RVLPDHTEPRRKPELVLRAEGGLWLRVE 517          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP4E2_DROME (Cytochrome P450 4e2 OS=Drosophila melanogaster GN=Cyp4e2 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.498e-18
Identity = 52/172 (30.23%), Postives = 97/172 (56.40%), Query Frame = -1
Query:  320 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDL---VSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNI 826
            +F+  G DT  SG++   +LLS+H + +  +  E  ++M  N +L    +F+++ ++ YL+  + E+ R++P V F  +F ++D ++ DG  V KGT +      +G  E+++  D  +F+PER+          PF+Y  F AG R C+G+  AL+E+K+    ++R F +
Sbjct:  303 TFMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQREVMG-NSELGRDATFQEISQMKYLDLFIKEAQRVYPSVPFIGRFTEKDYVI-DGDLVPKGTTLNLGLVMLGYNEKVF-KDPHKFRPERF----ELEKPGPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRNFEV 467          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP52V_CANAP (Cytochrome P450 52E1 OS=Candida apicola GN=CYP52E1 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.262e-18
Identity = 66/208 (31.73%), Postives = 100/208 (48.08%), Query Frame = -1
Query:  251 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNES-DKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDG--------TFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN-IRVSDPN-----QAPRFAPGLTATVSGGL 829
            ++ LLAGRDT A  L+   + L  + EV + +R     +    + +  +FEQL++   L   + E +RL P V  + + A  D  LP G         FV KG  V Y  Y+M R   IWGPD + F+P+RW      +    + Y  F  G R+CLG+  AL E     + + ++F+ I V  P+      + +    LT T SGG+
Sbjct:  307 LNILLAGRDTTAGLLSFITYYLGAYPEVYAELREAVLSEFGSTDVETPTFEQLKQCKVLQNVIREVLRLHPNVPLNFRQAIVDTKLPTGGGPNGDQPVFVPKGQNVFYSTYSMQRRTDIWGPDATTFRPDRWNEPREALASG-WDYIPFNGGPRICLGQQFALTEASYTIVRICQEFSRIEVLHPDVITSKNSMKQRMRLTQTASGGV 513          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP4F6_RAT (Cytochrome P450 4F6 OS=Rattus norvegicus GN=Cyp4f6 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.262e-18
Identity = 60/203 (29.56%), Postives = 100/203 (49.26%), Query Frame = -1
Query:  236 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQ-DLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFK-----YPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQ 826
            +F+  G DT AS L+   + L++H E +   R E  ++++  + + + ++ L +L +L   + ES+RL PPV   S+   +D +LPDG  + KG       + +     +W PD   + P R      F P+NP K     +  F AG R C+G+  A+ E+K A    + +F +   D  + PR  P L     GGL + V+
Sbjct:  324 TFMFGGHDTTASALSWILYNLARHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPVLLISRCCSQDIVLPDGRVIPKGNICVISIFGVHHNPSVW-PDPEVYNPFR------FDPENPQKRSPLAFIPFSAGPRNCIGQTFAMSEIKVALALTLLRFCVLPDD--KEPRRKPELILRAEGGLWLRVE 517          
The following BLAST results are available for this feature:
BLAST of CB290743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 224
Match NameE-valueIdentityDescription
CP4D1_DROME1.121e-1829.85Cytochrome P450 4d1 OS=Drosophila melanogaster GN=... [more]
CP3A6_RABIT1.121e-1833.70Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP4FE_MOUSE1.464e-1830.05Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus... [more]
CP4FB_HUMAN1.464e-1828.86Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE... [more]
CP52E_CANMA1.912e-1830.58Cytochrome P450 52A5 OS=Candida maltosa GN=CYP52A5... [more]
CP4F3_MOUSE1.912e-1829.80Leukotriene-B(4) omega-hydroxylase 2 OS=Mus muscul... [more]
CP4F2_HUMAN2.498e-1830.54Leukotriene-B(4) omega-hydroxylase 1 OS=Homo sapie... [more]
CP4E2_DROME2.498e-1830.23Cytochrome P450 4e2 OS=Drosophila melanogaster GN=... [more]
CP52V_CANAP3.262e-1831.73Cytochrome P450 52E1 OS=Candida apicola GN=CYP52E1... [more]
CP4F6_RAT3.262e-1829.56Cytochrome P450 4F6 OS=Rattus norvegicus GN=Cyp4f6... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dc09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dc09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290743 ID=CB290743; Name=CB290743; organism=Citrus sinensis; type=EST; length=829bp
TTTTTTTTTTTTTTTTAATAATTACTGACTTGAGATATATACCCCTTTAG
GAGACTAATACCAATAATCCAACTGTTTCAGTCAACCTCAAAGTTCCAAG
AAAGAAGTTATGGAATTAAAAGAACGTCTTAGTGTAAAATATTTACATAT
TCAAAACTATTCATGATATCCAGCATTAATTACTGTGTACAATCTGTTCT
AGCTTTAGTTAGCTAGCAAGCTAGTCTCCTCTTTCTTGAACCATCACCGG
TAAGCCGCCGCTCACGGTGGCAGTCAGACCGGGCGCAAACCGTGGAGCCT
GATTTGGATCCGAAACCCGAATGTTGAACTTCCTGACAACTGCAAGAGCC
GCACTTTTCATCTCCACTAGCGCCATATCCTTGCCCAAACAAACCCTATG
CCCAGCTTGAAAAACCGGGTACTTAAATGGGTTTTGGGGCACGAATGTTC
CATTTCTAAGCCATCTCTCAGGCTTGAATTCTGAACAATCTGGACCCCAA
ATCCGCTCCATCCGACCCATTGCGTACGGATGATATGTAACCCTAGTGCC
TTTTCTTACAAACGTACCATCCGGTAATATATCATCTTCTTGGGCAAACT
TGGAGTCAAACTGCACAGGAGGAAACAGCCTCATGCTCTCGTATACGGCG
GCGTTTAAGTAATGCAATTCTCGTAATTGTTCAAAGCTGACAAGATCCTG
ATTTGGCTTCATGATTTTATCTGACTCGTTTCTGATTGCTGATTCCACTT
CAGAATGTTGAGATAGCAACCAGAAGAAGCTTGTGAGCCCTGAGGCCACA
GTGTCACGACCGGCCAATAGGAAGCTGAC
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