CB290743

Overview
NameCB290743
Unique NameCB290743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP4C3_DROME (Cytochrome P450 4c3 OS=Drosophila melanogaster GN=Cyp4c3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.790e-16
Identity = 56/200 (28.00%), Postives = 96/200 (48.00%), Query Frame = -1
Query:  230 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDL-VSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQER 826
            +F+  G DT ++ ++   +LL  H E +  +  E D I   +++   + + L ++ YL   + +S+RLFP V   ++   ED +   G  V  GT+     YA+ R  R++ P   +F P+ +L       ++PF Y  F AG R C+G+  A++E K+    V+RK+ I   D  +       L      GL V +  R
Sbjct:  338 TFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKDSLRLFPSVPMMARMVGED-VNIGGKIVPAGTQAIIMTYALHRNPRVF-PKPEQFNPDNFLPENC-AGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRREDLTLLGELILRPKDGLRVKITPR 534          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP3AE_CAVPO (Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.790e-16
Identity = 52/179 (29.05%), Postives = 97/179 (54.19%), Query Frame = -1
Query:  293 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAP 829
            + F+ AG +T +S L+   + L+ H +V+  ++ E DK + PN+   +++ + E+ YL+  V E++RL+P      + +++D  + +G    KGT V    +A+ R  + W P+  EF+PER+ +       +P+ Y  F  G R C+G  MAL+ +K A + +++ F+       Q P
Sbjct:  300 IIFIFAGYETTSSTLSFIMYSLATHPDVQKKLQQEIDKTL-PNKAFPTYDVMMEMEYLDMVVNETLRLYPVTNRIERMSKKDFEI-NGMSFPKGTGVMIPSFALHRDSKYW-PEPDEFRPERFSKKNK-ENIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSFYPCKETQIP 474          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: C525A_DICDI (Probable cytochrome P450 525A1 OS=Dictyostelium discoideum GN=cyp525a1 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.790e-16
Identity = 61/210 (29.05%), Postives = 101/210 (48.10%), Query Frame = -1
Query:  239 SFLLAGRDTVASGLTSFFWLLSQHSEVES-----AIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGT---------FVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMV 826
            +FLLAG +T A+ LT  F+LLS H+ V++      I N+  KI K N+     E  + + +L+  +YE++RLFPP     + ++ DDIL  G           +   T +    YA+ R  ++W  D + F P RW         N   +  F +G RVC+G+  ++VE +     ++  F +  ++    P F     AT++   PV +
Sbjct:  388 TFLLAGHETSANLLTFIFYLLSTHNNVQNDLYNHLIENQKKKINKDNKFTEEDEDYQSIEFLDWVIYETLRLFPPAPMIGRTSKNDDILKSGNNNNNNNNNISIPSETLILISVYAIHRDPKLW-KDPNIFNPYRWKNIENI--NNRSDFIPFSSGGRVCVGQKFSIVEARIIISKLILNFELSFNNLKSKP-FKIYQRATLTPKYPVFL 593          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: C4D21_DROME (Probable cytochrome P450 4d21 OS=Drosophila melanogaster GN=Cyp4d21 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.790e-16
Identity = 54/169 (31.95%), Postives = 88/169 (52.07%), Query Frame = -1
Query:  320 FLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDL-VSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNI 823
            F+ AG DT  SG++     +S+H +V+  I  E   ++ P+ D  V+  +L EL YL+  + E+MRL PPV    ++  ED  + + T +   T +   PY + R    + PD   FKPERW+   T     P  Y  F +G + C+G+  A ++MK+    V+R + +
Sbjct:  313 FIFAGDDTTTSGVSHALHAISRHPKVQECIYEELVSVLGPDPDASVTQTKLLELKYLDCVIKETMRLHPPVPILGRYIPEDLKIGEIT-IPGNTSILLMPYYVYRDPEYF-PDPLVFKPERWMDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHYEL 479          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CYPE_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 2 OS=Bacillus subtilis GN=cypE PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.338e-16
Identity = 53/171 (30.99%), Postives = 91/171 (53.22%), Query Frame = -1
Query:  320 VSFLLAGRDTVASGLTSF-FWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNI 829
            ++FL+AG +T  SGL SF  + L  H E     + E+D+++    D   ++Q+++L Y+   + E++RL+P     S +A+ED +L     + KG  VT     + R +  WGPD  +F+PER+  + + +P + +K   F  G R C+G   AL E       V++ F +
Sbjct:  262 ITFLIAGHETT-SGLLSFAIYCLLTHPEKLKKAQEEADRVL--TDDTPEYKQIQQLKYIRMVLNETLRLYPTAPAFSLYAKEDTVLGGEYPISKGQPVTVLIPKLHRDQNAWGPDAEDFRPERF-EDPSSIPHHAYK--PFGNGQRACIGMQFALQEATMVLGLVLKHFEL 426          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.338e-16
Identity = 54/179 (30.17%), Postives = 95/179 (53.07%), Query Frame = -1
Query:  293 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAP 829
            + F+ AG +T +S L+   + L+ H +V+  ++ E +    PN+   +++ L ++ YL+  V E++RL+P +    + A + D+   G FV KGT V    + + R   +W P+  EF+PER+ +       NP+ Y  F  G R C+G   AL+ MK A + V++ F+ +     Q P
Sbjct:  300 IIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATF-PNKAPPTYDALAQMEYLDMVVNETLRLYP-IAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLW-PEPEEFRPERFSKKHKDTI-NPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFKPCKETQIP 474          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP52W_CANAP (Cytochrome P450 52E2 OS=Candida apicola GN=CYP52E2 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16
Identity = 59/186 (31.72%), Postives = 89/186 (47.85%), Query Frame = -1
Query:  302 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNES-DKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDG--------TFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN-IRVSDPN 829
            ++ LLAGRDT A+ L+   + L  + EV   +R          + +  +FEQL++   L   + E +RL P V  + + A  D   P G         FV KG +V Y  Y M R   IWGPD + F+P+RW      +    + Y  F  G R+CLG+  AL E     + + ++F+ I V  P+
Sbjct:  307 LNILLAGRDTTAALLSFTTYYLGAYPEVYDELREAVIADFGSADAEPPTFEQLKQCKVLQNVIREVLRLHPNVPLNFREAIADTTFPTGGGPNGDQPIFVPKGQKVFYATYVMQRNAGIWGPDSTSFRPDRWNEPREALASG-WDYIPFNGGPRICLGQQFALTEASYTLVRICQEFSRIEVLHPD 491          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: CP4FN_HUMAN (Cytochrome P450 4F22 OS=Homo sapiens GN=CYP4F22 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16
Identity = 57/203 (28.08%), Postives = 94/203 (46.31%), Query Frame = -1
Query:  236 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQ-DLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQN-----PFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQ 826
            +F+  G DT +SG++   + L+++ E +   R E  ++MK  + + + ++ L +L +    + ES+R +PPV   S+   ED  LPDG  + KG       Y       +W PD   + P R      F P N     P  Y  F AG R C+G+  A+ E++      + +F + V D  +  R  P L      GL + V+
Sbjct:  331 TFMFEGHDTTSSGISWMLFNLAKYPEYQEKCREEIQEVMKGRELEELEWDDLTQLPFTTMCIKESLRQYPPVTLVSRQCTEDIKLPDGRIIPKGIICLVSIYGTHHNPTVW-PDSKVYNPYR------FDPDNPQQRSPLAYVPFSAGPRNCIGQSFAMAELRVVVALTLLRFRLSV-DRTRKVRRKPELILRTENGLWLKVE 525          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16
Identity = 56/171 (32.75%), Postives = 86/171 (50.29%), Query Frame = -1
Query:  311 FLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVS 823
            F  AG++T    LT    LLS+H E +   R E  +    N+    FE+L  L Y++  +YE +RL+PPV   +K   +D  L   T +  GT+V      + R + IWG D  EF P R++       +N   Y  F  G RVCLG++ AL++ K     ++++F   V+
Sbjct:  329 FYFAGQETTGVLLTWTTILLSKHPEWQERAREEVLQAFGKNKP--EFERLNHLKYVSMILYEVLRLYPPVIDLTKIVHKDTKLGSYT-IPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVA 496          
BLAST of CB290743 vs. ExPASy Swiss-Prot
Match: C4D10_DROMT (Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp4d10 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16
Identity = 55/181 (30.39%), Postives = 98/181 (54.14%), Query Frame = -1
Query:  293 SFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIM-KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQF-DSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIR-VSDPNQAP 826
            +F+  G DT +SG+T FF+ ++ + E +     E   ++ K  +  V+++ L  L+Y++  + E++R++P V     K  QE +I  +G  +  GT +   P  +GR E I   + + FKPER+    +    NP  Y  F AG R C+G+  A++E+K+ A  V+R + I  V +  ++P
Sbjct:  313 TFMFEGHDTTSSGITFFFYNIALYPECQRKCVEEIVSVLGKDTETPVTYDLLNNLNYMDLCIKETLRMYPSVPLLGRKVLQECEI--NGKIIPAGTNIGISPLFLGRSEDI-SSEPNTFKPERFDVVTSAEKLNPHAYIPFSAGPRNCIGQKFAMLEIKAIAANVLRHYEIEFVGNAEESP 490          
The following BLAST results are available for this feature:
BLAST of CB290743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 224
Match NameE-valueIdentityDescription
CP4C3_DROME1.790e-1628.00Cytochrome P450 4c3 OS=Drosophila melanogaster GN=... [more]
CP3AE_CAVPO1.790e-1629.05Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14... [more]
C525A_DICDI1.790e-1629.05Probable cytochrome P450 525A1 OS=Dictyostelium di... [more]
C4D21_DROME1.790e-1631.95Probable cytochrome P450 4d21 OS=Drosophila melano... [more]
CYPE_BACSU2.338e-1630.99Probable bifunctional P-450/NADPH-P450 reductase 2... [more]
CP3AT_PIG2.338e-1630.17Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
CP52W_CANAP3.053e-1631.72Cytochrome P450 52E2 OS=Candida apicola GN=CYP52E2... [more]
CP4FN_HUMAN3.053e-1628.08Cytochrome P450 4F22 OS=Homo sapiens GN=CYP4F22 PE... [more]
C72A1_CATRO3.053e-1632.75Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
C4D10_DROMT3.053e-1630.39Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dc09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dc09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290743 ID=CB290743; Name=CB290743; organism=Citrus sinensis; type=EST; length=829bp
TTTTTTTTTTTTTTTTAATAATTACTGACTTGAGATATATACCCCTTTAG
GAGACTAATACCAATAATCCAACTGTTTCAGTCAACCTCAAAGTTCCAAG
AAAGAAGTTATGGAATTAAAAGAACGTCTTAGTGTAAAATATTTACATAT
TCAAAACTATTCATGATATCCAGCATTAATTACTGTGTACAATCTGTTCT
AGCTTTAGTTAGCTAGCAAGCTAGTCTCCTCTTTCTTGAACCATCACCGG
TAAGCCGCCGCTCACGGTGGCAGTCAGACCGGGCGCAAACCGTGGAGCCT
GATTTGGATCCGAAACCCGAATGTTGAACTTCCTGACAACTGCAAGAGCC
GCACTTTTCATCTCCACTAGCGCCATATCCTTGCCCAAACAAACCCTATG
CCCAGCTTGAAAAACCGGGTACTTAAATGGGTTTTGGGGCACGAATGTTC
CATTTCTAAGCCATCTCTCAGGCTTGAATTCTGAACAATCTGGACCCCAA
ATCCGCTCCATCCGACCCATTGCGTACGGATGATATGTAACCCTAGTGCC
TTTTCTTACAAACGTACCATCCGGTAATATATCATCTTCTTGGGCAAACT
TGGAGTCAAACTGCACAGGAGGAAACAGCCTCATGCTCTCGTATACGGCG
GCGTTTAAGTAATGCAATTCTCGTAATTGTTCAAAGCTGACAAGATCCTG
ATTTGGCTTCATGATTTTATCTGACTCGTTTCTGATTGCTGATTCCACTT
CAGAATGTTGAGATAGCAACCAGAAGAAGCTTGTGAGCCCTGAGGCCACA
GTGTCACGACCGGCCAATAGGAAGCTGAC
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