CB290745

Overview
NameCB290745
Unique NameCB290745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: CP4A5_RABIT (Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CYP4A5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 51/183 (27.87%), Postives = 84/183 (45.90%), Query Frame = -2
Query:  318 ESEAWLTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTL-IQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFD 863
            E+ + L+   ++A +      G DT+A  V W    L  +P    + + EI+  +G+   +T   +DQ+ Y  M IKE +RL+PP P  I+RD             PK   + ++ + +  +   W +PE F P RF   P   +     +LPF  G R C G    +   ++A+A  L  F+
Sbjct:  302 ENGSSLSDQDLRAEVDTFMFEGHDTTASGVSWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEAMRLYPPVP-AISRDLSSPVTFPDGRSLPKGFTVTLSIYGLHHNPNVWPNPEVFDPGRF--TPGSAR-HSHAFLPFSGGARNCIGKQFAMNELKVAVALTLVRFE 480          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: CP2E1_RABIT (Cytochrome P450 2E1 OS=Oryctolagus cuniculus GN=CYP2E1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 47/185 (25.41%), Postives = 87/185 (47.03%), Query Frame = -2
Query:  312 HESEAWLTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWK 866
            H +E   T  +I   + ++F  G +T++ T+ + +  L K+P + +K   EI   IG     +  D  Q+ Y+  V+ E  R     P  +  +        GY I   T++     ++  D + +  PE+F PE F+++    K  D+ + PF +G+R+C G  +  +   L L+ +L  F+ K
Sbjct:  278 HSTEPLYTLENIAVTVADMFFAGTETTSTTLRYGLLILLKHPEIEEKLHEEIDRVIGPSRMPSVRDRVQMPYMDAVVHEIQRFIDLVPSNLPHEATRDTTFQGYVIPKGTVVIPTLDSLLYDKQEFPDPEKFKPEHFLNEEGKFKYSDY-FKPFSAGKRVCVGEGLARMELFLLLSAILQHFNLK 461          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: CP2BJ_MOUSE (Cytochrome P450 2B19 OS=Mus musculus GN=Cyp2b19 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 50/164 (30.49%), Postives = 84/164 (51.22%), Query Frame = -2
Query:  342 LLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPL----LIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELAL 821
            +L++F  G +T++ T+ ++   + K P + +K Q EI   IG+    T  D  ++ Y   VI E  R    AP+     + +DT++R    GY I   T +     +   D +Y+E P+ F PE F+D    +K  +  ++PF +G+RIC G   G+  +EL L
Sbjct:  293 VLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFTDLAPIGLPHKVTKDTLFR----GYLIPKNTEVYPILSSALHDPRYFEQPDSFNPEHFLDANGALKTNE-AFMPFSTGKRICLG--EGIARNELFL 449          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: CP139_MYCTU (Putative cytochrome P450 139 OS=Mycobacterium tuberculosis GN=cyp139 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 56/191 (29.32%), Postives = 89/191 (46.60%), Query Frame = -2
Query:  297 ESEAWLTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEAD-IDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDV-KGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPNGR 863
            E    L+ N I+  ++++   G +T++  + WA+  L   P   + A +E+   +G  GRV  AD +  L YL  V+ ETLRL+ P  ++ AR  +     +G+ I    L+  +A+   R  + W  P EF P R+     D  K    E++PF  G   C G  M      + LA L+     +LP  R
Sbjct:  214 EEGTTLSDNEIRDSIVSLITAGYETTSGALAWAIYALLTVPGTWESAASEVARVLG--GRVPAADDLSALTYLNGVVHETLRLYSPG-VISARRVLRDLWFDGHRIRAGRLLIFSAYVTHRLPEIWPEPTEFRPLRWDPNAADYRKPAPHEFIPFSGGLHRCIGAVMATTEMTVILARLVARAMLQLPAQR 401          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: CP139_MYCBO (Putative cytochrome P450 139 OS=Mycobacterium bovis GN=cyp139 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 56/191 (29.32%), Postives = 89/191 (46.60%), Query Frame = -2
Query:  297 ESEAWLTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEAD-IDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDV-KGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPNGR 863
            E    L+ N I+  ++++   G +T++  + WA+  L   P   + A +E+   +G  GRV  AD +  L YL  V+ ETLRL+ P  ++ AR  +     +G+ I    L+  +A+   R  + W  P EF P R+     D  K    E++PF  G   C G  M      + LA L+     +LP  R
Sbjct:  214 EEGTTLSDNEIRDSIVSLITAGYETTSGALAWAIYALLTVPGTWESAASEVARVLG--GRVPAADDLSALTYLNGVVHETLRLYSPG-VISARRVLRDLWFDGHRIRAGRLLIFSAYVTHRLPEIWPEPTEFRPLRWDPNAADYRKPAPHEFIPFSGGLHRCIGAVMATTEMTVILARLVARAMLQLPAQR 401          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: CP52F_CANTR (Cytochrome P450 52A6 OS=Candida tropicalis GN=CYP52A6 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 56/182 (30.77%), Postives = 88/182 (48.35%), Query Frame = -2
Query:  318 LLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNH--IGNKGRVTEADIDQL---QYLKMVIKETLRLHPPAPL---LIARDTMY--RFKVNGYD--IYPK--TLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFD 821
            LLNI + G DT+A  + +AM EL ++P +  K + EI  +  +G + RV E   + L   +YLK ++ ETLR++P  P+      RDT        NG D    PK  T+  +       +  Y +  ++F PER+ +     K   + Y+PF  G RIC G    L  +   +  L+  F+
Sbjct:  315 LLNIMVAGRDTTAGLLSFAMFELARHPEIWSKLREEIEVNFGVGEESRVEEITFESLKRCEYLKAILNETLRMYPSVPVNSRTATRDTTLPRGGGPNGTDPIFIPKGSTVAYIVYKTHRLEEYYGKDADDFRPERWFEP--STKKLGWAYVPFNGGPRICLGQQFALTEASYVITRLVQMFE 494          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: CP4FB_HUMAN (Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 50/179 (27.93%), Postives = 86/179 (48.04%), Query Frame = -2
Query:  321 LTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKG--RVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLI-QVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCF 848
            L+   I+A        G DT+A  + W +  L K+P   ++ + E++  + ++    +   D+ QL +L M IKE+LRLHPP P +I+R     F +    + PK ++  +N   I  +   W  PE + P RF  + +  +     ++PF +G R C G    +   ++ LA  L  F
Sbjct:  313 LSDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEYQEQCRQEVQELLKDREPIEIEWDDLAQLPFLTMCIKESLRLHPPVP-VISRCCTQDFVLPDGRVIPKGIVCLINIIGIHYNPTVWPDPEVYDPFRFNQENIKER-SPLAFIPFSAGPRNCIGQAFAMAEMKVVLALTLLHF 489          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: CP2R1_MOUSE (Vitamin D 25-hydroxylase OS=Mus musculus GN=Cyp2r1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 47/170 (27.65%), Postives = 77/170 (45.29%), Query Frame = -2
Query:  303 IFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPN 812
            + + G +T+   + WA+  +   P +  +   EI   +G+  R +     ++ Y + V+ E LR     PL I   T     V GY I   T +  N +++  D KYW+ P+ F PERF+D       ++   +PF  GRR C G  +  +   L   +LL  F    P+
Sbjct:  307 LIIAGTETTTNVLRWAILFMALYPNIQGQVHKEIDLIVGHNRRPSWEYKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWKDPDMFYPERFLDSNGYFTKKE-ALIPFSLGRRHCLGEQLARMEMFLFFTSLLQQFHLHFPH 475          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: CP2CE_RABIT (Cytochrome P450 2C14 OS=Oryctolagus cuniculus GN=CYP2C14 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 45/185 (24.32%), Postives = 84/185 (45.41%), Query Frame = -2
Query:  312 HESEAWLTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWK 866
            H  ++  T  ++ A + ++F  G +T++ T+ + +  L K+P +  K Q EI   IG        D  ++ Y    + E  R     P  +   T    K   Y I   T +  +  ++  D++ +  P++F P  F+D   + K  D+ ++PF +G+R+C G  +  +   L L  +L  F  K
Sbjct:  276 HNQQSEFTIENLMATVTDVFAAGTETTSTTLRYGLLLLMKHPEVTAKVQEEIERVIGRHRSPCMQDRSRMPYTDATVHEIQRYINLVPNNVPHATTCNVKFRNYFIPKGTAVLTSLTSVLHDNQEFLKPDKFDPGHFLDASGNFKKSDY-FMPFSTGKRVCMGEALARMELFLFLTAILQNFTLK 459          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: CP2B1_RAT (Cytochrome P450 2B1 OS=Rattus norvegicus GN=Cyp2b1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = -2
Query:  342 LLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPL----LIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELAL 821
            LL++F  G +TS+ T+ +    + K P + +K Q EI   IG+    T  D  ++ Y   VI E  R     P+     + +DTM+R    GY +   T +     +   D +Y++ P+ F PE F+D    +K  +  ++PF +G+RIC G   G+  +EL L
Sbjct:  292 LLSLFFAGTETSSTTLRYGFLLMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRSKMPYTDAVIHEIQRFSDLVPIGVPHRVTKDTMFR----GYLLPKNTEVYPILSSALHDPQYFDHPDSFNPEHFLDANGALKKSE-AFMPFSTGKRICLG--EGIARNELFL 448          
The following BLAST results are available for this feature:
BLAST of CB290745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP4A5_RABIT3.738e-1227.87Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CY... [more]
CP2E1_RABIT3.738e-1225.41Cytochrome P450 2E1 OS=Oryctolagus cuniculus GN=CY... [more]
CP2BJ_MOUSE3.738e-1230.49Cytochrome P450 2B19 OS=Mus musculus GN=Cyp2b19 PE... [more]
CP139_MYCTU3.738e-1229.32Putative cytochrome P450 139 OS=Mycobacterium tube... [more]
CP139_MYCBO3.738e-1229.32Putative cytochrome P450 139 OS=Mycobacterium bovi... [more]
CP52F_CANTR4.882e-1230.77Cytochrome P450 52A6 OS=Candida tropicalis GN=CYP5... [more]
CP4FB_HUMAN4.882e-1227.93Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE... [more]
CP2R1_MOUSE4.882e-1227.65Vitamin D 25-hydroxylase OS=Mus musculus GN=Cyp2r1... [more]
CP2CE_RABIT4.882e-1224.32Cytochrome P450 2C14 OS=Oryctolagus cuniculus GN=C... [more]
CP2B1_RAT4.882e-1230.49Cytochrome P450 2B1 OS=Rattus norvegicus GN=Cyp2b1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dc10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dc10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290745 ID=CB290745; Name=CB290745; organism=Citrus sinensis; type=EST; length=870bp
TTTTTTTTTTTTTTTTTCTAACAAAATATAGATAACGGCCATTAATACAT
AATTTAGGTGATGATAATACATCATCCTCCTTTACGTGATTACAAGTGAT
TACATTACAATCAACCACAACTTGTACAGGAAGTTGAGCAAGTTACAACA
GAGCAATGTTGTTGTTGTCTTTCATTTTTCTGATGGCTATGCTACTGCAG
GTAATTGACTGGCACAAGGATAAGAGGCGTCTTTTTAGAGAGAGTGAGAG
ACACACCAGTTGCCTCCTCCATGTTCATGTTAACACCATCCTCCTCCCTT
CCATTCGGCAATTTCCAATCAAAACAATACAAGAGATTTGCAAGTGCAAG
CTCCGACGTTATTAATCCCATATTAATCCCAGGACAAATTCTTCGGCCGG
ATCCAAATGGTAAATATTCGAAATCTTGTCCTTTAACATCAACCGGCTTA
TCAATAAACCTTTCTGGGATGAATTCTTCAGGACTCTCCCAGTATTTTGA
ATCTCTTCCAATTGCCCAGGCATTCACTTGGATCAACGTTTTGGGATAAA
TGTCATAACCATTAACTTTGAAACGATACATGGTATCTCTCGCAATTAAT
AGTGGGGCAGGAGGGTGCAGTCTCAGAGTTTCCTTGATCACCATCTTCAG
GTACTGAAGTTGATCAATATCGGCTTCAGTAACTCTTCCTTTGTTTCCGA
TATGATTTCTGATTTCAGCTTGTGCTTTTTTCATCAATCTTGGATTCTTA
CAGAGCTCTGCCATTGCCCAAATCACCGTAATTGCGCTGGTGTCTACTCC
TCCCAGAAATATATTCAAAAGTACTGCCTTAATATGATTTTTTGTGAGCC
AAGCTTCACTTTCATGGGAT
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